RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 IGKCP01834 107 aa11.53□□□□□ -0.56
BRAT1-201ENST00000340611 SRSF9Q13242 221 aaKnown RBP eCLIP11.53□□□□□ -0.56
BRAT1-201ENST00000340611 NSD1Q96L73 2696 aaPredicted RBP11.53□□□□□ -0.56
BRAT1-201ENST00000340611 LYZL1Q6UWQ5 148 aa11.53□□□□□ -0.56
BRAT1-201ENST00000340611 TEN1Q86WV5 123 aa11.53□□□□□ -0.56
BRAT1-201ENST00000340611 CSDC2Q9Y534 153 aaKnown RBP11.53□□□□□ -0.56
BRAT1-201ENST00000340611 ANKRD29Q8N6D5 301 aa11.53□□□□□ -0.56
BRAT1-201ENST00000340611 PVRIGQ6DKI7 326 aa11.52□□□□□ -0.57
BRAT1-201ENST00000340611 TRAV41A0A0B4J266 112 aa11.51□□□□□ -0.57
BRAT1-201ENST00000340611 SRD5A1P18405 259 aa11.51□□□□□ -0.57
BRAT1-201ENST00000340611 C15orf32Q32M92 178 aa11.51□□□□□ -0.57
BRAT1-201ENST00000340611 Q6YL49 198 aa11.51□□□□□ -0.57
BRAT1-201ENST00000340611 KLK15Q9H2R5 256 aa11.51□□□□□ -0.57
BRAT1-201ENST00000340611 F8P00451 2351 aa11.51□□□□□ -0.57
BRAT1-201ENST00000340611 F8W735 103 aaPredicted RBP11.51□□□□□ -0.57
BRAT1-201ENST00000340611 JMJD1CQ15652 2540 aa11.51□□□□□ -0.57
BRAT1-201ENST00000340611 TRBV19A0A075B6N1 114 aa11.5□□□□□ -0.57
BRAT1-201ENST00000340611 NPYP01303 97 aa11.5□□□□□ -0.57
BRAT1-201ENST00000340611 IGKV1-17P01599 117 aa11.5□□□□□ -0.57
BRAT1-201ENST00000340611 LEPP41159 167 aa11.5□□□□□ -0.57
BRAT1-201ENST00000340611 IGHV3-11P01762 117 aa11.49□□□□□ -0.57
BRAT1-201ENST00000340611 CKS2P33552 79 aa11.49□□□□□ -0.57
BRAT1-201ENST00000340611 SIGLEC15Q6ZMC9 328 aa11.49□□□□□ -0.57
BRAT1-201ENST00000340611 ORMDL3Q8N138 153 aa11.49□□□□□ -0.57
BRAT1-201ENST00000340611 A8MWV9 139 aa11.49□□□□□ -0.57
BRAT1-201ENST00000340611 HLA-DRB4P13762 266 aa11.49□□□□□ -0.57
BRAT1-201ENST00000340611 SRSF2Q01130 221 aaKnown RBP11.49□□□□□ -0.57
BRAT1-201ENST00000340611 MRPL51Q4U2R6 128 aaKnown RBP11.49□□□□□ -0.57
BRAT1-201ENST00000340611 FAM104BQ5XKR9 115 aa11.49□□□□□ -0.57
BRAT1-201ENST00000340611 FAM110DQ8TAY7 271 aaPredicted RBP11.49□□□□□ -0.57
BRAT1-201ENST00000340611 TMEM14CQ9P0S9 112 aa11.49□□□□□ -0.57
BRAT1-201ENST00000340611 HLA-DRB4X5D2U9 266 aa11.49□□□□□ -0.57
BRAT1-201ENST00000340611 TMEM75Q8N9X5 138 aa11.49□□□□□ -0.57
BRAT1-201ENST00000340611 CHCHD5Q9BSY4 110 aa11.49□□□□□ -0.57
BRAT1-201ENST00000340611 IGHG2P01859 326 aa11.48□□□□□ -0.57
BRAT1-201ENST00000340611 C5orf47Q569G3 176 aa11.48□□□□□ -0.57
BRAT1-201ENST00000340611 SPXQ9BT56 116 aa11.48□□□□□ -0.57
BRAT1-201ENST00000340611 C21orf62Q9NYP8 219 aa11.48□□□□□ -0.57
BRAT1-201ENST00000340611 LINC00694P0DN24 101 aa11.48□□□□□ -0.57
BRAT1-201ENST00000340611 CLEC19AQ6UXS0 136 aa11.48□□□□□ -0.57
BRAT1-201ENST00000340611 GATD1Q8NB37 220 aa11.48□□□□□ -0.57
BRAT1-201ENST00000340611 TMEM262E9PQX1 116 aa11.47□□□□□ -0.57
BRAT1-201ENST00000340611 DPM2O94777 84 aa11.47□□□□□ -0.57
BRAT1-201ENST00000340611 GAS8-AS1O95177 125 aa11.47□□□□□ -0.57
BRAT1-201ENST00000340611 LY6G6DO95868 133 aa11.47□□□□□ -0.57
BRAT1-201ENST00000340611 TCL1BO95988 128 aa11.47□□□□□ -0.57
BRAT1-201ENST00000340611 SCGB1C2P0DMR2 95 aa11.47□□□□□ -0.57
BRAT1-201ENST00000340611 ESM1Q9NQ30 184 aa11.47□□□□□ -0.57
BRAT1-201ENST00000340611 MRPL35Q9NZE8 188 aaKnown RBP11.47□□□□□ -0.57
BRAT1-201ENST00000340611 TRBV12-3P01733 135 aa11.47□□□□□ -0.57
BRAT1-201ENST00000340611 TRGV3P03979 118 aa11.47□□□□□ -0.57
BRAT1-201ENST00000340611 SH2D1AO60880 128 aa11.46□□□□□ -0.57
BRAT1-201ENST00000340611 ZNF493Q6ZR52 646 aa11.46□□□□□ -0.57
BRAT1-201ENST00000340611 C9orf139Q6ZV77 190 aa11.46□□□□□ -0.57
BRAT1-201ENST00000340611 SHANK2-AS3Q9BTD1 123 aa11.46□□□□□ -0.57
BRAT1-201ENST00000340611 WNK1Q9H4A3 2382 aa11.46□□□□□ -0.57
BRAT1-201ENST00000340611 TWIST1Q15672 202 aa11.46□□□□□ -0.57
BRAT1-201ENST00000340611 TMEM158Q8WZ71 300 aa11.46□□□□□ -0.57
BRAT1-201ENST00000340611 CCDC140Q96MF4 163 aa11.46□□□□□ -0.57
BRAT1-201ENST00000340611 IGKV2-40A0A087WW87 121 aaPredicted RBP11.46□□□□□ -0.58
BRAT1-201ENST00000340611 CYSRT1A8MQ03 144 aa11.46□□□□□ -0.58
BRAT1-201ENST00000340611 IGKV2D-40P01614 121 aaPredicted RBP11.46□□□□□ -0.58
BRAT1-201ENST00000340611 MFAP4P55083 255 aa11.46□□□□□ -0.58
BRAT1-201ENST00000340611 C19orf54Q5BKX5 351 aa11.46□□□□□ -0.58
BRAT1-201ENST00000340611 TRBV7-3A0A075B6L6 115 aa11.45□□□□□ -0.58
BRAT1-201ENST00000340611 Q8TAT8 98 aa11.45□□□□□ -0.58
BRAT1-201ENST00000340611 MSRB1Q9NZV6 116 aa11.45□□□□□ -0.58
BRAT1-201ENST00000340611 U3KQK5 164 aa11.45□□□□□ -0.58
BRAT1-201ENST00000340611 IGHV3OR16-13A0A075B7E8 117 aa11.45□□□□□ -0.58
BRAT1-201ENST00000340611 IGHV3-74A0A0B4J1X5 117 aa11.45□□□□□ -0.58
BRAT1-201ENST00000340611 CTSGP08311 255 aa11.45□□□□□ -0.58
BRAT1-201ENST00000340611 TRBV6-1A0A0K0K1D8 114 aa11.44□□□□□ -0.58
BRAT1-201ENST00000340611 H3BRN7 92 aa11.44□□□□□ -0.58
BRAT1-201ENST00000340611 IGF1P05019 195 aa11.44□□□□□ -0.58
BRAT1-201ENST00000340611 IGFL4Q6B9Z1 124 aa11.44□□□□□ -0.58
BRAT1-201ENST00000340611 IGHV3-49A0A0A0MS15 119 aa11.44□□□□□ -0.58
BRAT1-201ENST00000340611 RPL7P18124 248 aaKnown RBP11.44□□□□□ -0.58
BRAT1-201ENST00000340611 C15orf53Q8NAA6 179 aa11.44□□□□□ -0.58
BRAT1-201ENST00000340611 DNAJC9-AS1A6NH13 148 aa11.43□□□□□ -0.58
BRAT1-201ENST00000340611 ZNF491Q8N8L2 437 aa11.43□□□□□ -0.58
BRAT1-201ENST00000340611 RASL10AQ92737 203 aa11.43□□□□□ -0.58
BRAT1-201ENST00000340611 RNF125Q96EQ8 232 aa11.43□□□□□ -0.58
BRAT1-201ENST00000340611 MYMXA0A1B0GTQ4 84 aa11.43□□□□□ -0.58
BRAT1-201ENST00000340611 A4D1N5 150 aa11.43□□□□□ -0.58
BRAT1-201ENST00000340611 ZNF702PQ9H963 129 aa11.43□□□□□ -0.58
BRAT1-201ENST00000340611 IGHV3-66A0A0C4DH42 116 aa11.42□□□□□ -0.58
BRAT1-201ENST00000340611 GATA1P15976 413 aaPredicted RBP11.42□□□□□ -0.58
BRAT1-201ENST00000340611 VCX2Q9H322 139 aa11.42□□□□□ -0.58
BRAT1-201ENST00000340611 AAMDCQ9H7C9 122 aa11.42□□□□□ -0.58
BRAT1-201ENST00000340611 C9JAW5 83 aa11.42□□□□□ -0.58
BRAT1-201ENST00000340611 CRIP2P52943 208 aaPredicted RBP11.42□□□□□ -0.58
BRAT1-201ENST00000340611 ZMAT4Q9H898 229 aa11.42□□□□□ -0.58
BRAT1-201ENST00000340611 INAFM1C9JVW0 142 aa11.42□□□□□ -0.58
BRAT1-201ENST00000340611 TAL2Q16559 108 aa11.42□□□□□ -0.58
BRAT1-201ENST00000340611 SMIM9A6NGZ8 99 aa11.41□□□□□ -0.58
BRAT1-201ENST00000340611 H7C2G1 150 aa11.41□□□□□ -0.58
BRAT1-201ENST00000340611 ZNF80P51504 273 aaPredicted RBP11.41□□□□□ -0.58
BRAT1-201ENST00000340611 C2CD3Q4AC94 2353 aa11.41□□□□□ -0.58
BRAT1-201ENST00000340611 MRPS12O15235 138 aaKnown RBP11.41□□□□□ -0.58
BRAT1-201ENST00000340611 SCGB1D4Q6XE38 83 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 206.6 ms