RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ZNF688P0C7X2 276 aa10.89□□□□□ -0.67
CPSF7-201ENST00000340437 CCL19Q99731 98 aa10.89□□□□□ -0.67
CPSF7-201ENST00000340437 AZU1P20160 251 aa10.88□□□□□ -0.67
CPSF7-201ENST00000340437 CLEC2AQ6UVW9 174 aa10.88□□□□□ -0.67
CPSF7-201ENST00000340437 GPHB5Q86YW7 130 aa10.88□□□□□ -0.67
CPSF7-201ENST00000340437 OPRPNQ99935 248 aaPredicted RBP10.88□□□□□ -0.67
CPSF7-201ENST00000340437 LGALS1P09382 135 aaKnown RBP10.88□□□□□ -0.67
CPSF7-201ENST00000340437 PSMG3-AS1Q96PY0 264 aa10.88□□□□□ -0.67
CPSF7-201ENST00000340437 E9PLD3 99 aa10.87□□□□□ -0.67
CPSF7-201ENST00000340437 IGHV4-61A0A0C4DH41 118 aa10.87□□□□□ -0.67
CPSF7-201ENST00000340437 OVOL1O14753 267 aa10.87□□□□□ -0.67
CPSF7-201ENST00000340437 ZNF56Q15929 161 aa10.87□□□□□ -0.67
CPSF7-201ENST00000340437 KLK9Q9UKQ9 250 aa10.87□□□□□ -0.67
CPSF7-201ENST00000340437 IGHV4-39P01824 125 aa10.86□□□□□ -0.67
CPSF7-201ENST00000340437 TOMM6Q96B49 74 aa10.86□□□□□ -0.67
CPSF7-201ENST00000340437 IGHV3-73A0A0B4J1V6 119 aa10.86□□□□□ -0.67
CPSF7-201ENST00000340437 IGHV1-69DA0A0B4J2H0 117 aa10.86□□□□□ -0.67
CPSF7-201ENST00000340437 IGHV1-69P01742 117 aa10.86□□□□□ -0.67
CPSF7-201ENST00000340437 RRN3P1Q2M238 152 aa10.86□□□□□ -0.67
CPSF7-201ENST00000340437 IGSF10Q6WRI0 2623 aa10.86□□□□□ -0.67
CPSF7-201ENST00000340437 SCGB1C2P0DMR2 95 aa10.86□□□□□ -0.67
CPSF7-201ENST00000340437 C10orf99Q6UWK7 81 aa10.86□□□□□ -0.67
CPSF7-201ENST00000340437 NEXN-AS1Q8NBZ9 246 aa10.86□□□□□ -0.67
CPSF7-201ENST00000340437 PTH2Q96A98 100 aa10.86□□□□□ -0.67
CPSF7-201ENST00000340437 RNASE3P12724 160 aaKnown RBP10.85□□□□□ -0.67
CPSF7-201ENST00000340437 PSMG4Q5JS54 123 aa10.85□□□□□ -0.67
CPSF7-201ENST00000340437 MUC4Q99102 2169 aa10.85□□□□□ -0.67
CPSF7-201ENST00000340437 U3KQE9 123 aa10.85□□□□□ -0.67
CPSF7-201ENST00000340437 C11orf86A6NJI1 115 aa10.85□□□□□ -0.67
CPSF7-201ENST00000340437 ZFP2Q6ZN57 461 aa10.85□□□□□ -0.67
CPSF7-201ENST00000340437 ITLN2Q8WWU7 325 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-201ENST00000340437 SIGMAR1Q99720 223 aa10.85□□□□□ -0.67
CPSF7-201ENST00000340437 SPAG8Q99932 426 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-201ENST00000340437 LINC01546A6NGU7 62 aa10.85□□□□□ -0.67
CPSF7-201ENST00000340437 FAM223BA6NKX1 122 aa10.85□□□□□ -0.67
CPSF7-201ENST00000340437 J3QR89 54 aa10.85□□□□□ -0.67
CPSF7-201ENST00000340437 FAM223AQ8IWN6 122 aa10.85□□□□□ -0.67
CPSF7-201ENST00000340437 PIFOQ8TCI5 191 aa10.85□□□□□ -0.67
CPSF7-201ENST00000340437 GAGE12HA6NDE8 117 aa10.84□□□□□ -0.67
CPSF7-201ENST00000340437 MRPL53Q96EL3 112 aaKnown RBP10.84□□□□□ -0.67
CPSF7-201ENST00000340437 NDUFA4O00483 81 aa10.83□□□□□ -0.67
CPSF7-201ENST00000340437 KIR2DL4Q99706 377 aa10.83□□□□□ -0.67
CPSF7-201ENST00000340437 SPANXB1Q9NS25 103 aaPredicted RBP10.83□□□□□ -0.67
CPSF7-201ENST00000340437 TRBV7-3A0A075B6L6 115 aa10.83□□□□□ -0.68
CPSF7-201ENST00000340437 IGHV3OR16-12A0A075B7B8 117 aa10.83□□□□□ -0.68
CPSF7-201ENST00000340437 SDHAF1A6NFY7 115 aa10.83□□□□□ -0.68
CPSF7-201ENST00000340437 SUMO4Q6EEV6 95 aa10.82□□□□□ -0.68
CPSF7-201ENST00000340437 F8W1H4 67 aa10.82□□□□□ -0.68
CPSF7-201ENST00000340437 RAX2Q96IS3 184 aa10.82□□□□□ -0.68
CPSF7-201ENST00000340437 C20orf78Q9BR46 151 aa10.82□□□□□ -0.68
CPSF7-201ENST00000340437 MDFICQ9P1T7 246 aa10.82□□□□□ -0.68
CPSF7-201ENST00000340437 SPINK13Q1W4C9 94 aa10.82□□□□□ -0.68
CPSF7-201ENST00000340437 CELSR2Q9HCU4 2923 aa10.82□□□□□ -0.68
CPSF7-201ENST00000340437 IGHV4-4A0A075B6R2 117 aa10.81□□□□□ -0.68
CPSF7-201ENST00000340437 DUX3Q96PT4 197 aa10.81□□□□□ -0.68
CPSF7-201ENST00000340437 TRAV12-1A0A0B4J245 112 aa10.81□□□□□ -0.68
CPSF7-201ENST00000340437 A0A1W2PRX2 142 aa10.81□□□□□ -0.68
CPSF7-201ENST00000340437 HERVK_113P61574 105 aa10.81□□□□□ -0.68
CPSF7-201ENST00000340437 ADARB2-AS1A8MUL3 147 aa10.8□□□□□ -0.68
CPSF7-201ENST00000340437 PRM2P04554 102 aa10.8□□□□□ -0.68
CPSF7-201ENST00000340437 DAZ1Q9NQZ3 744 aaKnown RBP10.8□□□□□ -0.68
CPSF7-201ENST00000340437 BEX4Q9NWD9 120 aaPredicted RBP10.8□□□□□ -0.68
CPSF7-201ENST00000340437 RNASE13Q5GAN3 156 aaKnown RBP10.8□□□□□ -0.68
CPSF7-201ENST00000340437 MORN3Q6PF18 240 aaPredicted RBP10.8□□□□□ -0.68
CPSF7-201ENST00000340437 TAL2Q16559 108 aa10.8□□□□□ -0.68
CPSF7-201ENST00000340437 PIMREGQ9BSJ6 248 aa10.79□□□□□ -0.68
CPSF7-201ENST00000340437 IGHV4-30-2A0A087WSY4 118 aa10.79□□□□□ -0.68
CPSF7-201ENST00000340437 TRAV2A0A0B4J234 112 aa10.79□□□□□ -0.68
CPSF7-201ENST00000340437 TMEM238LA0A1B0GVL6 79 aa10.79□□□□□ -0.68
CPSF7-201ENST00000340437 A6NJY4 79 aa10.79□□□□□ -0.68
CPSF7-201ENST00000340437 NDUFS8O00217 210 aa10.79□□□□□ -0.68
CPSF7-201ENST00000340437 CRYGDP07320 174 aa10.79□□□□□ -0.68
CPSF7-201ENST00000340437 ID1P41134 155 aa10.79□□□□□ -0.68
CPSF7-201ENST00000340437 KNCNA6PVL3 124 aa10.78□□□□□ -0.68
CPSF7-201ENST00000340437 TSHBP01222 138 aa10.78□□□□□ -0.68
CPSF7-201ENST00000340437 LENEPQ9Y5L5 61 aa10.78□□□□□ -0.68
CPSF7-201ENST00000340437 RNF223E7ERA6 249 aa10.78□□□□□ -0.68
CPSF7-201ENST00000340437 SOCS3O14543 225 aa10.78□□□□□ -0.68
CPSF7-201ENST00000340437 LGALS3P17931 250 aaKnown RBP10.78□□□□□ -0.68
CPSF7-201ENST00000340437 Q1RN00 199 aa10.78□□□□□ -0.68
CPSF7-201ENST00000340437 TEX15Q9BXT5 2789 aa10.78□□□□□ -0.68
CPSF7-201ENST00000340437 PMVKQ15126 192 aa10.78□□□□□ -0.68
CPSF7-201ENST00000340437 CHD6Q8TD26 2715 aa10.77□□□□□ -0.68
CPSF7-201ENST00000340437 PRSS47A8MTI9 375 aa10.77□□□□□ -0.68
CPSF7-201ENST00000340437 VCYO14598 125 aa10.77□□□□□ -0.68
CPSF7-201ENST00000340437 TSPEAR-AS2P59090 65 aa10.77□□□□□ -0.68
CPSF7-201ENST00000340437 NPC2P61916 151 aa10.77□□□□□ -0.68
CPSF7-201ENST00000340437 NF1P21359 2839 aa10.77□□□□□ -0.69
CPSF7-201ENST00000340437 TSPAN13O95857 204 aa10.77□□□□□ -0.69
CPSF7-201ENST00000340437 SYNJ2BPP57105 145 aa10.77□□□□□ -0.69
CPSF7-201ENST00000340437 SYT8Q8NBV8 401 aa10.77□□□□□ -0.69
CPSF7-201ENST00000340437 FLNAP21333 2647 aaKnown RBP10.77□□□□□ -0.69
CPSF7-201ENST00000340437 DLX4Q92988 240 aaPredicted RBP10.77□□□□□ -0.69
CPSF7-201ENST00000340437 USMG5Q96IX5 58 aa10.77□□□□□ -0.69
CPSF7-201ENST00000340437 AVPP01185 164 aa10.76□□□□□ -0.69
CPSF7-201ENST00000340437 PRSS2P07478 247 aa10.76□□□□□ -0.69
CPSF7-201ENST00000340437 HIST2H2BCQ6DN03 193 aa10.76□□□□□ -0.69
CPSF7-201ENST00000340437 Q8N1Y9 231 aa10.76□□□□□ -0.69
CPSF7-201ENST00000340437 ZNRF2Q8NHG8 242 aa10.76□□□□□ -0.69
CPSF7-201ENST00000340437 CSMD2Q7Z408 3487 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms