RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 NSUN5P1Q3KNT7 163 aa7.92□□□□□ -1.14
TRAF3IP2-201ENST00000340026 Q8N1Y9 231 aa7.92□□□□□ -1.14
TRAF3IP2-201ENST00000340026 BAALCQ8WXS3 180 aa7.92□□□□□ -1.14
TRAF3IP2-201ENST00000340026 TM2D2Q9BX73 214 aa7.92□□□□□ -1.14
TRAF3IP2-201ENST00000340026 LRRK2Q5S007 2527 aa7.92□□□□□ -1.14
TRAF3IP2-201ENST00000340026 USP9YO00507 2555 aaPredicted RBP7.92□□□□□ -1.14
TRAF3IP2-201ENST00000340026 IGIPA6NJ69 53 aa7.92□□□□□ -1.14
TRAF3IP2-201ENST00000340026 K7EP13 123 aa7.92□□□□□ -1.14
TRAF3IP2-201ENST00000340026 NMUP48645 174 aa7.92□□□□□ -1.14
TRAF3IP2-201ENST00000340026 CHTOPQ9Y3Y2 248 aaKnown RBP7.92□□□□□ -1.14
TRAF3IP2-201ENST00000340026 M0QY20 66 aa7.91□□□□□ -1.14
TRAF3IP2-201ENST00000340026 PTTG1IPP53801 180 aa7.91□□□□□ -1.14
TRAF3IP2-201ENST00000340026 FHL3Q13643 280 aa7.91□□□□□ -1.14
TRAF3IP2-201ENST00000340026 ZFP2Q6ZN57 461 aa7.91□□□□□ -1.14
TRAF3IP2-201ENST00000340026 TRPT1Q86TN4 253 aaKnown RBP7.91□□□□□ -1.14
TRAF3IP2-201ENST00000340026 KIR2DL4Q99706 377 aa7.91□□□□□ -1.14
TRAF3IP2-201ENST00000340026 H3BMM0 161 aa7.91□□□□□ -1.14
TRAF3IP2-201ENST00000340026 C9orf118A6NHY6 69 aa7.9□□□□□ -1.14
TRAF3IP2-201ENST00000340026 E9PLD3 99 aa7.9□□□□□ -1.14
TRAF3IP2-201ENST00000340026 CRYBG3Q68DQ2 2970 aa7.9□□□□□ -1.14
TRAF3IP2-201ENST00000340026 TRBV25-1A0A075B6N4 114 aa7.9□□□□□ -1.15
TRAF3IP2-201ENST00000340026 TMEM160Q9NX00 188 aa7.9□□□□□ -1.15
TRAF3IP2-201ENST00000340026 MDFICQ9P1T7 246 aa7.9□□□□□ -1.15
TRAF3IP2-201ENST00000340026 PTPN13Q12923 2485 aa7.9□□□□□ -1.15
TRAF3IP2-201ENST00000340026 SLURP1P55000 103 aa7.89□□□□□ -1.15
TRAF3IP2-201ENST00000340026 SPINK13Q1W4C9 94 aa7.89□□□□□ -1.15
TRAF3IP2-201ENST00000340026 OR11H1Q8NG94 326 aa7.89□□□□□ -1.15
TRAF3IP2-201ENST00000340026 CREBBPQ92793 2442 aa7.89□□□□□ -1.15
TRAF3IP2-201ENST00000340026 SDHAF1A6NFY7 115 aa7.89□□□□□ -1.15
TRAF3IP2-201ENST00000340026 MORN3Q6PF18 240 aaPredicted RBP7.89□□□□□ -1.15
TRAF3IP2-201ENST00000340026 GTSCR1Q86UQ5 136 aa7.89□□□□□ -1.15
TRAF3IP2-201ENST00000340026 CHAC1Q9BUX1 264 aa7.89□□□□□ -1.15
TRAF3IP2-201ENST00000340026 AKAP9Q99996 3911 aa7.89□□□□□ -1.15
TRAF3IP2-201ENST00000340026 CSMD2Q7Z408 3487 aa7.89□□□□□ -1.15
TRAF3IP2-201ENST00000340026 FAM208BQ5VWN6 2430 aa7.89□□□□□ -1.15
TRAF3IP2-201ENST00000340026 PF4P02776 101 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 CRYBA4P53673 196 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 DEFB114Q30KQ6 69 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 UFSP1Q6NVU6 142 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 Q6ZSV7 163 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 C16orf95Q9H693 158 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 NAV2Q8IVL1 2488 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 PRSS29PA6NIE9 313 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 TSHBP01222 138 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 MXRA5Q9NR99 2828 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 TRAV12-2A0A075B6T6 113 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 SPRY2O43597 315 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 PMVKQ15126 192 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 VAMP3Q15836 100 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 Q6ZVH6 145 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 DUX5Q96PT3 197 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 JPT2Q9H910 190 aa7.88□□□□□ -1.15
TRAF3IP2-201ENST00000340026 ZFYVE26Q68DK2 2539 aa7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 A8MWV9 139 aa7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 RBMY1A1P0DJD3 496 aaKnown RBP7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 RBMY1CP0DJD4 496 aa7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 RBMY1FQ15415 496 aaKnown RBP7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 TMEM61Q8N0U2 210 aa7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 MAP6D1Q9H9H5 199 aa7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 IGLV4-69A0A075B6H9 119 aa7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 OR11H12B2RN74 326 aa7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 DEFB131AP59861 70 aa7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 C18orf65Q6ZTR6 163 aa7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 CEND1Q8N111 149 aa7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 OR11H2Q8NH07 326 aa7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 TP53TG1Q9Y2A0 90 aa7.87□□□□□ -1.15
TRAF3IP2-201ENST00000340026 ZANQ9Y493 2812 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 A0A087WWL8 130 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 MYMXA0A1B0GTQ4 84 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 DNAJC9-AS1A6NH13 148 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 BEAN1Q3B7T3 259 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 ZNF876PQ49A33 203 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 NFE4Q86UQ8 179 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 DLX4Q92988 240 aaPredicted RBP7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 SPXQ9BT56 116 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 PYGO1Q9Y3Y4 419 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 TRAV8-6A0A0B4J262 113 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 A0A1B0GWB2 263 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 RBMY1BA6NDE4 496 aaKnown RBP7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 RBMY1EA6NEQ0 496 aaKnown RBP7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 C11orf86A6NJI1 115 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 I3L3M4 83 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 M0R2P5 195 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 RBMY1DP0C7P1 496 aaKnown RBP7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 ZNF415Q09FC8 603 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 SCGB2A2Q13296 93 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 FAM110AQ9BQ89 295 aa7.86□□□□□ -1.15
TRAF3IP2-201ENST00000340026 CMC4P56277 68 aaPredicted RBP7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 KRTAP1-1Q07627 177 aa7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 OR4C5Q8NGB2 326 aa7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 PHLDA1Q8WV24 401 aaPredicted RBP7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 CST9LQ9H4G1 147 aa7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 TRBV7-3A0A075B6L6 115 aa7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 RHODO00212 210 aa7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 RNASE1P07998 156 aaKnown RBP7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 SMIM13P0DJ93 91 aa7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 DEFB136Q30KP8 78 aa7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 AMMECR1LQ6DCA0 310 aa7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 GTF2H5Q6ZYL4 71 aa7.85□□□□□ -1.15
TRAF3IP2-201ENST00000340026 MAPKAPK5-AS1Q8N8E1 139 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms