RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 ZFAND3Q9H8U3 227 aa8.46□□□□□ -1.06
SEMA4D-201ENST00000339861 LMO4P61968 165 aa8.46□□□□□ -1.06
SEMA4D-201ENST00000339861 UBE2E2Q96LR5 201 aa8.45□□□□□ -1.06
SEMA4D-201ENST00000339861 PRRC2AP48634 2157 aaKnown RBP8.45□□□□□ -1.06
SEMA4D-201ENST00000339861 IGHV7-4-1A0A0J9YVY3 117 aa8.45□□□□□ -1.06
SEMA4D-201ENST00000339861 C16orf54Q6UWD8 224 aa8.45□□□□□ -1.06
SEMA4D-201ENST00000339861 IGLL5B9A064 214 aa8.45□□□□□ -1.06
SEMA4D-201ENST00000339861 SIVA1O15304 175 aa8.45□□□□□ -1.06
SEMA4D-201ENST00000339861 COX6B1P14854 86 aa8.45□□□□□ -1.06
SEMA4D-201ENST00000339861 TMEM190Q8WZ59 177 aa8.45□□□□□ -1.06
SEMA4D-201ENST00000339861 ACANP16112 2415 aa8.45□□□□□ -1.06
SEMA4D-201ENST00000339861 B4DSR2 109 aa8.44□□□□□ -1.06
SEMA4D-201ENST00000339861 GATD1Q8NB37 220 aa8.44□□□□□ -1.06
SEMA4D-201ENST00000339861 TRAV8-2A0A0B4J237 113 aa8.44□□□□□ -1.06
SEMA4D-201ENST00000339861 RBAKDNA6NC62 111 aa8.44□□□□□ -1.06
SEMA4D-201ENST00000339861 Q6ZS46 218 aa8.44□□□□□ -1.06
SEMA4D-201ENST00000339861 MEIG1Q5JSS6 88 aa8.44□□□□□ -1.06
SEMA4D-201ENST00000339861 C10orf99Q6UWK7 81 aa8.44□□□□□ -1.06
SEMA4D-201ENST00000339861 RNF223E7ERA6 249 aa8.43□□□□□ -1.06
SEMA4D-201ENST00000339861 DLX4Q92988 240 aaPredicted RBP8.43□□□□□ -1.06
SEMA4D-201ENST00000339861 NDUFS8O00217 210 aa8.43□□□□□ -1.06
SEMA4D-201ENST00000339861 PMVKQ15126 192 aa8.43□□□□□ -1.06
SEMA4D-201ENST00000339861 FBXL19-AS1Q494R0 122 aa8.43□□□□□ -1.06
SEMA4D-201ENST00000339861 C9orf47Q6ZRZ4 202 aa8.43□□□□□ -1.06
SEMA4D-201ENST00000339861 PAPPA-AS1Q5QFB9 102 aa8.43□□□□□ -1.06
SEMA4D-201ENST00000339861 TOMM7Q9P0U1 55 aa8.43□□□□□ -1.06
SEMA4D-201ENST00000339861 AZU1P20160 251 aa8.42□□□□□ -1.06
SEMA4D-201ENST00000339861 EDN2P20800 178 aa8.42□□□□□ -1.06
SEMA4D-201ENST00000339861 DEFB112Q30KQ8 113 aa8.42□□□□□ -1.06
SEMA4D-201ENST00000339861 SUMO4Q6EEV6 95 aa8.42□□□□□ -1.06
SEMA4D-201ENST00000339861 ZNF48Q96MX3 618 aaPredicted RBP8.42□□□□□ -1.06
SEMA4D-201ENST00000339861 ZNF462Q96JM2 2506 aa8.42□□□□□ -1.06
SEMA4D-201ENST00000339861 RPL13AP40429 203 aaKnown RBP8.42□□□□□ -1.06
SEMA4D-201ENST00000339861 MDFICQ9P1T7 246 aa8.42□□□□□ -1.06
SEMA4D-201ENST00000339861 COL12A1Q99715 3063 aa8.42□□□□□ -1.06
SEMA4D-201ENST00000339861 C9JAW5 83 aa8.42□□□□□ -1.06
SEMA4D-201ENST00000339861 BAALCQ8WXS3 180 aa8.42□□□□□ -1.06
SEMA4D-201ENST00000339861 RASL10AQ92737 203 aa8.42□□□□□ -1.06
SEMA4D-201ENST00000339861 A8MWV9 139 aa8.41□□□□□ -1.06
SEMA4D-201ENST00000339861 PTH2Q96A98 100 aa8.41□□□□□ -1.06
SEMA4D-201ENST00000339861 ERG28Q9UKR5 140 aa8.41□□□□□ -1.06
SEMA4D-201ENST00000339861 U3KQK5 164 aa8.41□□□□□ -1.06
SEMA4D-201ENST00000339861 CLPSL1A2RUU4 121 aa8.41□□□□□ -1.06
SEMA4D-201ENST00000339861 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
SEMA4D-201ENST00000339861 COX6CP09669 75 aa8.41□□□□□ -1.06
SEMA4D-201ENST00000339861 C11orf71Q6IPW1 123 aa8.41□□□□□ -1.06
SEMA4D-201ENST00000339861 XCL2Q9UBD3 114 aa8.41□□□□□ -1.06
SEMA4D-201ENST00000339861 RRN3P1Q2M238 152 aa8.41□□□□□ -1.06
SEMA4D-201ENST00000339861 IGHG4P01861 327 aa8.4□□□□□ -1.06
SEMA4D-201ENST00000339861 TCTEX1D4Q5JR98 221 aa8.4□□□□□ -1.06
SEMA4D-201ENST00000339861 Q8N6K4 173 aa8.4□□□□□ -1.06
SEMA4D-201ENST00000339861 C20orf78Q9BR46 151 aa8.4□□□□□ -1.06
SEMA4D-201ENST00000339861 EPG5Q9HCE0 2579 aa8.4□□□□□ -1.06
SEMA4D-201ENST00000339861 IGHV1OR15-1A0A075B7D0 117 aa8.4□□□□□ -1.06
SEMA4D-201ENST00000339861 GAGE12HA6NDE8 117 aa8.4□□□□□ -1.06
SEMA4D-201ENST00000339861 ZFP2Q6ZN57 461 aa8.4□□□□□ -1.07
SEMA4D-201ENST00000339861 FOXI2Q6ZQN5 318 aa8.4□□□□□ -1.07
SEMA4D-201ENST00000339861 PLEKHB2Q96CS7 222 aa8.4□□□□□ -1.07
SEMA4D-201ENST00000339861 A0A0J9YXV3 536 aa8.39□□□□□ -1.07
SEMA4D-201ENST00000339861 J3QQQ9 107 aa8.39□□□□□ -1.07
SEMA4D-201ENST00000339861 PRM2P04554 102 aa8.39□□□□□ -1.07
SEMA4D-201ENST00000339861 Q8N1Y9 231 aa8.39□□□□□ -1.07
SEMA4D-201ENST00000339861 TRAV13-1A0A0B4J241 112 aa8.39□□□□□ -1.07
SEMA4D-201ENST00000339861 ZFAND2AQ8N6M9 145 aa8.39□□□□□ -1.07
SEMA4D-201ENST00000339861 EBI3Q14213 229 aa8.39□□□□□ -1.07
SEMA4D-201ENST00000339861 CEMP1Q6PRD7 247 aaPredicted RBP8.39□□□□□ -1.07
SEMA4D-201ENST00000339861 TRGV1A0A0A0MS02 117 aa8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 A0A1B0GV72 72 aa8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 LGALS1P09382 135 aaKnown RBP8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 NRACQ8N912 160 aa8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 TRGV11A0A075B6L2 103 aa8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 PRB1P04280 392 aa8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 P0DMU3 169 aa8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 FAM231AP0DMU4 169 aa8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 FAM231CP0DMU5 169 aa8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 MRPL53Q96EL3 112 aaKnown RBP8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 F8W1H4 67 aa8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 UBE2L6O14933 153 aa8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 CFHR3Q02985 330 aa8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 C19orf54Q5BKX5 351 aa8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 HHLA3Q9XRX5 114 aa8.38□□□□□ -1.07
SEMA4D-201ENST00000339861 TMEM238C9JI98 176 aa8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 TIMM21Q9BVV7 248 aa8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 RELNP78509 3460 aa8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 APRG1Q8IVJ8 170 aa8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 ANKRD17O75179 2603 aaKnown RBP8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 IGKV2-29A2NJV5 120 aaPredicted RBP8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 SPINK8P0C7L1 97 aa8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 SLURP1P55000 103 aa8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 TRGV2A0A075B6R0 118 aa8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 G3V4G9 280 aa8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 HOXD3P31249 432 aaPredicted RBP8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 TRPT1Q86TN4 253 aaKnown RBP8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 TOMM6Q96B49 74 aa8.37□□□□□ -1.07
SEMA4D-201ENST00000339861 STHQ8IWL8 128 aa8.36□□□□□ -1.07
SEMA4D-201ENST00000339861 HIGD1BQ9P298 99 aa8.36□□□□□ -1.07
SEMA4D-201ENST00000339861 LENEPQ9Y5L5 61 aa8.36□□□□□ -1.07
SEMA4D-201ENST00000339861 CIRBPQ14011 172 aaKnown RBP8.36□□□□□ -1.07
SEMA4D-201ENST00000339861 I3L3M4 83 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms