RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 UBE2E1P51965 193 aa10.75□□□□□ -0.69
PCDH8-201ENST00000338862 IGKV3OR2-268A0A0C4DH90 116 aa10.74□□□□□ -0.69
PCDH8-201ENST00000338862 TCF15Q12870 199 aa10.74□□□□□ -0.69
PCDH8-201ENST00000338862 HIST2H2BDQ6DRA6 164 aa10.74□□□□□ -0.69
PCDH8-201ENST00000338862 Q6ZS46 218 aa10.74□□□□□ -0.69
PCDH8-201ENST00000338862 LY6G5BQ8NDX9 201 aa10.74□□□□□ -0.69
PCDH8-201ENST00000338862 ID1P41134 155 aa10.74□□□□□ -0.69
PCDH8-201ENST00000338862 CLPSL1A2RUU4 121 aa10.74□□□□□ -0.69
PCDH8-201ENST00000338862 FOXI1Q12951 378 aa10.74□□□□□ -0.69
PCDH8-201ENST00000338862 PRM2P04554 102 aa10.73□□□□□ -0.69
PCDH8-201ENST00000338862 CEMP1Q6PRD7 247 aaPredicted RBP10.73□□□□□ -0.69
PCDH8-201ENST00000338862 PHLDA1Q8WV24 401 aaPredicted RBP10.73□□□□□ -0.69
PCDH8-201ENST00000338862 ERG28Q9UKR5 140 aa10.73□□□□□ -0.69
PCDH8-201ENST00000338862 MOB4Q9Y3A3 225 aa10.73□□□□□ -0.69
PCDH8-201ENST00000338862 IGHV3-38A0A0C4DH36 116 aa10.73□□□□□ -0.69
PCDH8-201ENST00000338862 OVOL1O14753 267 aa10.73□□□□□ -0.69
PCDH8-201ENST00000338862 TSPAN13O95857 204 aa10.73□□□□□ -0.69
PCDH8-201ENST00000338862 ODF3BA8MYP8 253 aa10.73□□□□□ -0.69
PCDH8-201ENST00000338862 PMVKQ15126 192 aa10.73□□□□□ -0.69
PCDH8-201ENST00000338862 SVIPQ8NHG7 77 aa10.73□□□□□ -0.69
PCDH8-201ENST00000338862 MTORP42345 2549 aa10.73□□□□□ -0.69
PCDH8-201ENST00000338862 VCYO14598 125 aa10.72□□□□□ -0.69
PCDH8-201ENST00000338862 DUX3Q96PT4 197 aa10.72□□□□□ -0.69
PCDH8-201ENST00000338862 A4D1N5 150 aa10.72□□□□□ -0.69
PCDH8-201ENST00000338862 J3QQQ9 107 aa10.72□□□□□ -0.69
PCDH8-201ENST00000338862 ATP5J2P56134 94 aa10.72□□□□□ -0.69
PCDH8-201ENST00000338862 IGHV3-16A0A0C4DH30 117 aa10.72□□□□□ -0.69
PCDH8-201ENST00000338862 A0A0J9YXV3 536 aa10.72□□□□□ -0.69
PCDH8-201ENST00000338862 CD28P10747 220 aa10.72□□□□□ -0.69
PCDH8-201ENST00000338862 SUMO4Q6EEV6 95 aa10.72□□□□□ -0.69
PCDH8-201ENST00000338862 SNCGO76070 127 aa10.71□□□□□ -0.69
PCDH8-201ENST00000338862 TCL1BO95988 128 aa10.71□□□□□ -0.69
PCDH8-201ENST00000338862 ADORA2A-AS1P86434 159 aa10.71□□□□□ -0.69
PCDH8-201ENST00000338862 TTC32Q5I0X7 151 aa10.71□□□□□ -0.69
PCDH8-201ENST00000338862 TEX29Q8N6K0 151 aa10.71□□□□□ -0.69
PCDH8-201ENST00000338862 MDFICQ9P1T7 246 aa10.71□□□□□ -0.69
PCDH8-201ENST00000338862 IGHV4-38-2P0DP08 117 aa10.71□□□□□ -0.69
PCDH8-201ENST00000338862 C11orf44Q8N8P7 122 aa10.71□□□□□ -0.69
PCDH8-201ENST00000338862 DAND5Q8N907 189 aa10.71□□□□□ -0.69
PCDH8-201ENST00000338862 TOMM6Q96B49 74 aa10.71□□□□□ -0.69
PCDH8-201ENST00000338862 A0A1W2PPR1 153 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 RBAKDNA6NC62 111 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 OOSP1A8MZH6 123 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 K7ENP7 123 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 NEXN-AS1Q8NBZ9 246 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 NTN5Q8WTR8 489 aaPredicted RBP10.7□□□□□ -0.7
PCDH8-201ENST00000338862 PRRC2AP48634 2157 aaKnown RBP10.7□□□□□ -0.7
PCDH8-201ENST00000338862 SYNJ2BPP57105 145 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 TAL2Q16559 108 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 C9orf47Q6ZRZ4 202 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 C1QTNF4Q9BXJ3 329 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 PRO1854Q9UHT4 67 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 IGLV2-18A0A075B6J9 118 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 P0DMU3 169 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 FAM231AP0DMU4 169 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 FAM231CP0DMU5 169 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 KLRB1Q12918 225 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 ZFAND2AQ8N6M9 145 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 C3orf56Q8N813 242 aa10.7□□□□□ -0.7
PCDH8-201ENST00000338862 ZMAT4Q9H898 229 aa10.69□□□□□ -0.7
PCDH8-201ENST00000338862 MORN3Q6PF18 240 aaPredicted RBP10.69□□□□□ -0.7
PCDH8-201ENST00000338862 ANKRD29Q8N6D5 301 aa10.69□□□□□ -0.7
PCDH8-201ENST00000338862 SS18L2Q9UHA2 77 aa10.69□□□□□ -0.7
PCDH8-201ENST00000338862 EPG5Q9HCE0 2579 aa10.69□□□□□ -0.7
PCDH8-201ENST00000338862 PKD1L2Q7Z442 2459 aa10.69□□□□□ -0.7
PCDH8-201ENST00000338862 TRBV7-3A0A075B6L6 115 aa10.69□□□□□ -0.7
PCDH8-201ENST00000338862 SLC25A20O43772 301 aa10.69□□□□□ -0.7
PCDH8-201ENST00000338862 CRYBA4P53673 196 aa10.69□□□□□ -0.7
PCDH8-201ENST00000338862 C5orf56Q8N8D9 126 aa10.69□□□□□ -0.7
PCDH8-201ENST00000338862 AJUBAQ96IF1 538 aa10.69□□□□□ -0.7
PCDH8-201ENST00000338862 SNRPD3P62318 126 aaKnown RBP10.68□□□□□ -0.7
PCDH8-201ENST00000338862 C10orf99Q6UWK7 81 aa10.68□□□□□ -0.7
PCDH8-201ENST00000338862 PPDPFLQ8WWR9 84 aa10.68□□□□□ -0.7
PCDH8-201ENST00000338862 SIRPDQ9H106 197 aa10.68□□□□□ -0.7
PCDH8-201ENST00000338862 ZNF580Q9UK33 172 aa10.68□□□□□ -0.7
PCDH8-201ENST00000338862 TNFRSF18Q9Y5U5 241 aa10.68□□□□□ -0.7
PCDH8-201ENST00000338862 TRAV8-3A0A0A6YYJ7 113 aa10.68□□□□□ -0.7
PCDH8-201ENST00000338862 A8MZ25 164 aa10.68□□□□□ -0.7
PCDH8-201ENST00000338862 PPP1R17O96001 155 aa10.68□□□□□ -0.7
PCDH8-201ENST00000338862 MUSTN1Q8IVN3 82 aa10.68□□□□□ -0.7
PCDH8-201ENST00000338862 NFE4Q86UQ8 179 aa10.67□□□□□ -0.7
PCDH8-201ENST00000338862 DAZ1Q9NQZ3 744 aaKnown RBP10.67□□□□□ -0.7
PCDH8-201ENST00000338862 B5MCH6 92 aa10.67□□□□□ -0.7
PCDH8-201ENST00000338862 NDUFA11Q86Y39 141 aa10.67□□□□□ -0.7
PCDH8-201ENST00000338862 ZFAND6Q6FIF0 208 aa10.67□□□□□ -0.7
PCDH8-201ENST00000338862 CFAP161Q6P656 301 aa10.67□□□□□ -0.7
PCDH8-201ENST00000338862 ZNF48Q96MX3 618 aaPredicted RBP10.67□□□□□ -0.7
PCDH8-201ENST00000338862 CNFNQ9BYD5 112 aa10.67□□□□□ -0.7
PCDH8-201ENST00000338862 IGF2-ASQ6U949 168 aa10.66□□□□□ -0.7
PCDH8-201ENST00000338862 NRGNQ92686 78 aa10.66□□□□□ -0.7
PCDH8-201ENST00000338862 XGP55808 180 aa10.66□□□□□ -0.7
PCDH8-201ENST00000338862 GAGE2BQ13066 116 aa10.66□□□□□ -0.7
PCDH8-201ENST00000338862 GAGE2EQ4V326 116 aa10.66□□□□□ -0.7
PCDH8-201ENST00000338862 GAGE2DQ9UEU5 116 aa10.66□□□□□ -0.7
PCDH8-201ENST00000338862 PAPPA-AS1Q5QFB9 102 aa10.66□□□□□ -0.7
PCDH8-201ENST00000338862 RNF183Q96D59 192 aa10.66□□□□□ -0.7
PCDH8-201ENST00000338862 HIVEP2P31629 2446 aa10.65□□□□□ -0.7
PCDH8-201ENST00000338862 COL27A1Q8IZC6 1860 aaPredicted RBP10.65□□□□□ -0.7
PCDH8-201ENST00000338862 RNASE3P12724 160 aaKnown RBP10.65□□□□□ -0.7
PCDH8-201ENST00000338862 CRIP2P52943 208 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms