RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.09□□□□□ -0.47
HDAC5-202ENST00000336057 IGKV2-29A2NJV5 120 aaPredicted RBP12.09□□□□□ -0.47
HDAC5-202ENST00000336057 MED14OSP0DP75 135 aa12.09□□□□□ -0.47
HDAC5-202ENST00000336057 HCFC1P51610 2035 aa12.09□□□□□ -0.47
HDAC5-202ENST00000336057 LOXL1Q08397 574 aaPredicted RBP12.09□□□□□ -0.47
HDAC5-202ENST00000336057 IGHG2P01859 326 aa12.09□□□□□ -0.47
HDAC5-202ENST00000336057 RNASE8Q8TDE3 154 aaKnown RBP12.09□□□□□ -0.47
HDAC5-202ENST00000336057 SPANXA1Q9NS26 97 aa12.09□□□□□ -0.47
HDAC5-202ENST00000336057 CRYGBP07316 175 aa12.08□□□□□ -0.48
HDAC5-202ENST00000336057 TOMM6Q96B49 74 aa12.08□□□□□ -0.48
HDAC5-202ENST00000336057 TEX48A0A1B0GUV7 120 aa12.08□□□□□ -0.48
HDAC5-202ENST00000336057 DEFB1P60022 68 aa12.08□□□□□ -0.48
HDAC5-202ENST00000336057 SLURP1P55000 103 aa12.08□□□□□ -0.48
HDAC5-202ENST00000336057 CARD19Q96LW7 228 aa12.08□□□□□ -0.48
HDAC5-202ENST00000336057 A0A0J9YXV3 536 aa12.07□□□□□ -0.48
HDAC5-202ENST00000336057 UNQ9165/PRO28630Q6UXU0 137 aa12.07□□□□□ -0.48
HDAC5-202ENST00000336057 Q8N1Y9 231 aa12.07□□□□□ -0.48
HDAC5-202ENST00000336057 BAALCQ8WXS3 180 aa12.07□□□□□ -0.48
HDAC5-202ENST00000336057 RPL39P62891 51 aaKnown RBP12.06□□□□□ -0.48
HDAC5-202ENST00000336057 DAD1P61803 113 aa12.06□□□□□ -0.48
HDAC5-202ENST00000336057 GPHB5Q86YW7 130 aa12.06□□□□□ -0.48
HDAC5-202ENST00000336057 SH2D6Q7Z4S9 175 aa12.06□□□□□ -0.48
HDAC5-202ENST00000336057 CCDC140Q96MF4 163 aa12.06□□□□□ -0.48
HDAC5-202ENST00000336057 FSTL3O95633 263 aa12.06□□□□□ -0.48
HDAC5-202ENST00000336057 NTN5Q8WTR8 489 aaPredicted RBP12.06□□□□□ -0.48
HDAC5-202ENST00000336057 SPAG8Q99932 426 aaPredicted RBP12.06□□□□□ -0.48
HDAC5-202ENST00000336057 APRG1Q8IVJ8 170 aa12.05□□□□□ -0.48
HDAC5-202ENST00000336057 ATG2AQ2TAZ0 1938 aa12.05□□□□□ -0.48
HDAC5-202ENST00000336057 F5H768 121 aa12.05□□□□□ -0.48
HDAC5-202ENST00000336057 RNF152Q8N8N0 203 aa12.05□□□□□ -0.48
HDAC5-202ENST00000336057 NOP10Q9NPE3 64 aaKnown RBP12.05□□□□□ -0.48
HDAC5-202ENST00000336057 MYCNOSP40205 109 aa12.05□□□□□ -0.48
HDAC5-202ENST00000336057 WNK1Q9H4A3 2382 aa12.05□□□□□ -0.48
HDAC5-202ENST00000336057 TRAV13-2A0A0B4J235 113 aa12.05□□□□□ -0.48
HDAC5-202ENST00000336057 E9PLD3 99 aa12.05□□□□□ -0.48
HDAC5-202ENST00000336057 IGLC6P0CF74 106 aa12.05□□□□□ -0.48
HDAC5-202ENST00000336057 TRBV12-3P01733 135 aa12.04□□□□□ -0.48
HDAC5-202ENST00000336057 Q9H8V8 135 aa12.04□□□□□ -0.48
HDAC5-202ENST00000336057 PRSS47A8MTI9 375 aa12.04□□□□□ -0.48
HDAC5-202ENST00000336057 TIMM17AQ99595 171 aa12.04□□□□□ -0.48
HDAC5-202ENST00000336057 SOCS3O14543 225 aa12.04□□□□□ -0.48
HDAC5-202ENST00000336057 NACAE9PAV3 2078 aa12.04□□□□□ -0.48
HDAC5-202ENST00000336057 IGHV4OR15-8A0A075B7B6 117 aa12.03□□□□□ -0.48
HDAC5-202ENST00000336057 A0A087WW49 117 aa12.03□□□□□ -0.48
HDAC5-202ENST00000336057 CCL24O00175 119 aa12.03□□□□□ -0.48
HDAC5-202ENST00000336057 ATRXP46100 2492 aa12.03□□□□□ -0.48
HDAC5-202ENST00000336057 NOTCH2Q04721 2471 aa12.03□□□□□ -0.48
HDAC5-202ENST00000336057 A4D1N5 150 aa12.03□□□□□ -0.48
HDAC5-202ENST00000336057 NXPH4O95158 308 aa12.03□□□□□ -0.48
HDAC5-202ENST00000336057 LMO4P61968 165 aa12.03□□□□□ -0.48
HDAC5-202ENST00000336057 LINC01548A6NM66 108 aa12.03□□□□□ -0.48
HDAC5-202ENST00000336057 PIEZO2Q9H5I5 2752 aa12.02□□□□□ -0.48
HDAC5-202ENST00000336057 LY6LH3BQJ8 138 aa12.02□□□□□ -0.48
HDAC5-202ENST00000336057 MUSTN1Q8IVN3 82 aa12.02□□□□□ -0.49
HDAC5-202ENST00000336057 C11orf86A6NJI1 115 aa12.01□□□□□ -0.49
HDAC5-202ENST00000336057 TMEM89A2RUT3 159 aa12.01□□□□□ -0.49
HDAC5-202ENST00000336057 EDA2RQ9HAV5 297 aa12.01□□□□□ -0.49
HDAC5-202ENST00000336057 IFITM1P13164 125 aa12.01□□□□□ -0.49
HDAC5-202ENST00000336057 A6NDX4 124 aa12□□□□□ -0.49
HDAC5-202ENST00000336057 WFDC2Q14508 124 aa12□□□□□ -0.49
HDAC5-202ENST00000336057 TANC2Q9HCD6 1990 aa12□□□□□ -0.49
HDAC5-202ENST00000336057 NRGNQ92686 78 aa12□□□□□ -0.49
HDAC5-202ENST00000336057 CRIP1P50238 77 aa12□□□□□ -0.49
HDAC5-202ENST00000336057 DEFB113Q30KQ7 82 aa12□□□□□ -0.49
HDAC5-202ENST00000336057 SLC25A29Q8N8R3 303 aa12□□□□□ -0.49
HDAC5-202ENST00000336057 CENPFP49454 3210 aa11.99□□□□□ -0.49
HDAC5-202ENST00000336057 ZNF561-AS1K7EIQ3 104 aa11.99□□□□□ -0.49
HDAC5-202ENST00000336057 HERV-K104P63124 156 aa11.99□□□□□ -0.49
HDAC5-202ENST00000336057 EBI3Q14213 229 aa11.99□□□□□ -0.49
HDAC5-202ENST00000336057 A0A0J9YX75 114 aa11.98□□□□□ -0.49
HDAC5-202ENST00000336057 APOC4P55056 127 aa11.98□□□□□ -0.49
HDAC5-202ENST00000336057 NAV3Q8IVL0 2385 aa11.98□□□□□ -0.49
HDAC5-202ENST00000336057 MDFICQ9P1T7 246 aa11.98□□□□□ -0.49
HDAC5-202ENST00000336057 A0A096LPF7 62 aa11.98□□□□□ -0.49
HDAC5-202ENST00000336057 ANKRD29Q8N6D5 301 aa11.98□□□□□ -0.49
HDAC5-202ENST00000336057 PTPN13Q12923 2485 aa11.97□□□□□ -0.49
HDAC5-202ENST00000336057 IGLV2-11P01706 119 aa11.97□□□□□ -0.49
HDAC5-202ENST00000336057 ANGP03950 147 aaKnown RBP11.97□□□□□ -0.49
HDAC5-202ENST00000336057 K7EQD1 137 aa11.96□□□□□ -0.49
HDAC5-202ENST00000336057 C15orf53Q8NAA6 179 aa11.96□□□□□ -0.49
HDAC5-202ENST00000336057 TP73-AS1Q9UF72 201 aa11.96□□□□□ -0.49
HDAC5-202ENST00000336057 IGHG4P01861 327 aa11.96□□□□□ -0.49
HDAC5-202ENST00000336057 TEN1Q86WV5 123 aa11.96□□□□□ -0.49
HDAC5-202ENST00000336057 TLN1Q9Y490 2541 aaKnown RBP11.96□□□□□ -0.5
HDAC5-202ENST00000336057 C20orf203Q8NBC4 194 aa11.96□□□□□ -0.5
HDAC5-202ENST00000336057 DAZ2Q13117 558 aaKnown RBP11.96□□□□□ -0.5
HDAC5-202ENST00000336057 DAZ4Q86SG3 579 aaKnown RBP11.96□□□□□ -0.5
HDAC5-202ENST00000336057 DAZ3Q9NR90 486 aaKnown RBP11.96□□□□□ -0.5
HDAC5-202ENST00000336057 XCL1P47992 114 aa11.95□□□□□ -0.5
HDAC5-202ENST00000336057 C9orf153Q5TBE3 101 aa11.95□□□□□ -0.5
HDAC5-202ENST00000336057 CLPSL2Q6UWE3 100 aa11.95□□□□□ -0.5
HDAC5-202ENST00000336057 ZFAND3Q9H8U3 227 aa11.95□□□□□ -0.5
HDAC5-202ENST00000336057 IGF1P05019 195 aa11.95□□□□□ -0.5
HDAC5-202ENST00000336057 SPANXDQ9BXN6 97 aa11.95□□□□□ -0.5
HDAC5-202ENST00000336057 IGF2RP11717 2491 aa11.94□□□□□ -0.5
HDAC5-202ENST00000336057 C16orf74Q96GX8 76 aa11.94□□□□□ -0.5
HDAC5-202ENST00000336057 SMAD5-AS1Q9Y6J3 95 aa11.94□□□□□ -0.5
HDAC5-202ENST00000336057 ICOSQ9Y6W8 199 aa11.94□□□□□ -0.5
HDAC5-202ENST00000336057 TNFRSF13BO14836 293 aaPredicted RBP11.94□□□□□ -0.5
HDAC5-202ENST00000336057 EML5Q05BV3 1969 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms