RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 OR10AC1Q8NH08 325 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 OR4A16Q8NH70 328 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 COQ8AQ8NI60 647 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 NEK7Q8TDX7 302 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 MAFIPQ8WZ33 124 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 ARHGAP5-AS1Q96IT6 56 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 LINC00477Q96M19 166 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 HIST1H2BLQ99880 126 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 IMUPQ9GZP8 106 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 MS4A6AQ9H2W1 248 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 PLEKHA3Q9HB20 300 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 ZNF492Q9P255 531 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 TRAPPC2LQ9UL33 140 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 C3orf85A0A1B0GTC6 90 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 IZUMO1RA6ND01 250 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 C9JVG2 144 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 BUB3O43684 328 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 HIST1H2BKO60814 126 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 CA2P00918 260 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 IGKV1-5P01602 117 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 HIST1H2BJP06899 126 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 GRPP07492 148 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 PATE4P0C8F1 98 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 PGAM2P15259 253 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 HIST1H2BOP23527 126 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 HIST1H2BBP33778 126 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 GABRA2P47869 451 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 GNG4P50150 75 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 FOXA3P55318 350 aaPredicted RBP0.88□□□□□ -2.27
LINC00643-201ENST00000334389 HIST1H2BDP58876 126 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 HIST1H2BCP62807 126 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 FOXI1Q12951 378 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 FXYD3Q14802 87 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 HIST2H2BEQ16778 126 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 C21orf62-AS1Q17RA5 79 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 ESRGQ1W209 222 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 PIGYQ3MUY2 71 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.88□□□□□ -2.27
LINC00643-201ENST00000334389 LINC01545Q5VT33 79 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 TMEM236Q5W0B7 351 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 TEPPQ6URK8 271 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 ZNF826PQ6ZT77 177 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 TMEM75Q8N9X5 138 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 HIST1H2BHQ93079 126 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 TMEM230Q96A57 120 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 MRAP2Q96G30 205 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 TMEM101Q96IK0 257 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 VSIG2Q96IQ7 327 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 METTL26Q96S19 204 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 ATP5SQ99766 215 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 HIST1H2BNQ99877 126 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 HIST1H2BMQ99879 126 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 C20orf85Q9H1P6 137 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 WDR13Q9H1Z4 485 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 OR2S2Q9NQN1 319 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 TNFRSF19Q9NS68 423 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 TMEM140Q9NV12 185 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 ZNF586Q9NXT0 402 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 C21orf62Q9NYP8 219 aa0.88□□□□□ -2.27
LINC00643-201ENST00000334389 A0A1B0GW15 77 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 A0A1W2PRE2 83 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 IGLL5B9A064 214 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 TSTD3H0UI37 97 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 H3BMG7 143 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 IGHV3-7P01780 117 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 IGHV3-9P01782 118 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 PMP2P02689 132 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 EIF4EP06730 217 aaKnown RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 FGF6P10767 208 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 RPL7P18124 248 aaKnown RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 PPP1CCP36873 323 aaKnown RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 HERV-K104P61576 105 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 MXD1Q05195 221 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 AESQ08117 197 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 EDDM3AQ14507 147 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 IAH1Q2TAA2 248 aaPredicted RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 KHDC3LQ587J8 217 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 C9orf152Q5JTZ5 239 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 COL5A1-AS1Q5SY13 56 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 C22orf42Q6IC83 251 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 STEAP1BQ6NZ63 245 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 PHF5AQ7RTV0 110 aaKnown RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 STHQ8IWL8 128 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 C18orf32Q8TCD1 76 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 BAALCQ8WXS3 180 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 KCNS1Q96KK3 526 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 C16orf92Q96LL3 132 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 PDCD1LG2Q9BQ51 273 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 TIMM21Q9BVV7 248 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 WDR61Q9GZS3 305 aaKnown RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 AGPAT4-IT1Q9H0P7 198 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 AMBNQ9NP70 447 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 CELA1Q9UNI1 258 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 C14orf166Q9Y224 244 aaKnown RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 TIMM8BQ9Y5J9 83 aaPredicted RBP0.87□□□□□ -2.27
LINC00643-201ENST00000334389 OR51B2Q9Y5P1 312 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 KIF25-AS1Q9Y6Z4 181 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 TRAV8-6A0A0B4J262 113 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 LOC102723971A0A1B0GUV8 181 aa0.87□□□□□ -2.27
LINC00643-201ENST00000334389 UMAD1C9J7I0 102 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms