RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 TMEM61Q8N0U2 210 aa6.46□□□□□ -1.38
LSAMP-201ENST00000333617 Q8N8P6 123 aa6.46□□□□□ -1.38
LSAMP-201ENST00000333617 NRACQ8N912 160 aa6.46□□□□□ -1.38
LSAMP-201ENST00000333617 ZNF418Q8TF45 676 aaPredicted RBP6.46□□□□□ -1.38
LSAMP-201ENST00000333617 RAX2Q96IS3 184 aa6.46□□□□□ -1.38
LSAMP-201ENST00000333617 AP1S3Q96PC3 154 aa6.46□□□□□ -1.38
LSAMP-201ENST00000333617 TRAV26-2A0A0B4J265 109 aa6.45□□□□□ -1.38
LSAMP-201ENST00000333617 A0A1W2PRX2 142 aa6.45□□□□□ -1.38
LSAMP-201ENST00000333617 PRSS47A8MTI9 375 aa6.45□□□□□ -1.38
LSAMP-201ENST00000333617 SPRY2O43597 315 aa6.45□□□□□ -1.38
LSAMP-201ENST00000333617 NXPH4O95158 308 aa6.45□□□□□ -1.38
LSAMP-201ENST00000333617 DEFB131AP59861 70 aa6.45□□□□□ -1.38
LSAMP-201ENST00000333617 SPINK13Q1W4C9 94 aa6.45□□□□□ -1.38
LSAMP-201ENST00000333617 DEFB114Q30KQ6 69 aa6.45□□□□□ -1.38
LSAMP-201ENST00000333617 MAJINQ3KP22 176 aa6.45□□□□□ -1.38
LSAMP-201ENST00000333617 C14orf178Q8N769 122 aaPredicted RBP6.45□□□□□ -1.38
LSAMP-201ENST00000333617 C11orf44Q8N8P7 122 aa6.45□□□□□ -1.38
LSAMP-201ENST00000333617 TSSC4Q9Y5U2 329 aaPredicted RBP6.45□□□□□ -1.38
LSAMP-201ENST00000333617 FN1P02751 2386 aaKnown RBP6.44□□□□□ -1.38
LSAMP-201ENST00000333617 KNCNA6PVL3 124 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 CCL24O00175 119 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 IGLC3P0DOY3 106 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 HLA-DRB4P13762 266 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 FCER1GP30273 86 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 FXYD7P58549 80 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 HILS1P60008 231 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 FHL3Q13643 280 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 LINC01545Q5VT33 79 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 AMTNQ6UX39 209 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 DEFB125Q8N687 156 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 LINC01006Q8NI28 216 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 SPATA25Q9BR10 227 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 UQCR10Q9UDW1 63 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 HLA-DRB4X5D2U9 266 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 IGLV2-18A0A075B6J9 118 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 IGHV1OR15-1A0A075B7D0 117 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 IGHV3-16A0A0C4DH30 117 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 A8MTW9 85 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 HSBP1L1C9JCN9 74 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 MGPP08493 103 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 SMIM17P0DL12 118 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 IGLL1P15814 213 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 LBHQ53QV2 105 aaPredicted RBP6.44□□□□□ -1.38
LSAMP-201ENST00000333617 SMR3AQ99954 134 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 CITED2Q99967 270 aaPredicted RBP6.44□□□□□ -1.38
LSAMP-201ENST00000333617 MAP6D1Q9H9H5 199 aa6.44□□□□□ -1.38
LSAMP-201ENST00000333617 HIVEP1P15822 2718 aa6.43□□□□□ -1.38
LSAMP-201ENST00000333617 TRAV25A0A0B4J276 109 aa6.43□□□□□ -1.38
LSAMP-201ENST00000333617 H3BMM0 161 aa6.43□□□□□ -1.38
LSAMP-201ENST00000333617 M0R143 59 aa6.43□□□□□ -1.38
LSAMP-201ENST00000333617 PPP1R17O96001 155 aa6.43□□□□□ -1.38
LSAMP-201ENST00000333617 LAGE3Q14657 143 aa6.43□□□□□ -1.38
LSAMP-201ENST00000333617 CD300EQ496F6 205 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-201ENST00000333617 IFI27L1Q96BM0 104 aa6.43□□□□□ -1.38
LSAMP-201ENST00000333617 C9orf85Q96MD7 179 aa6.43□□□□□ -1.38
LSAMP-201ENST00000333617 SPAG8Q99932 426 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-201ENST00000333617 MCRIP2Q9BUT9 160 aaKnown RBP6.43□□□□□ -1.38
LSAMP-201ENST00000333617 ST20Q9HBF5 79 aa6.43□□□□□ -1.38
LSAMP-201ENST00000333617 C2CD3Q4AC94 2353 aa6.43□□□□□ -1.38
LSAMP-201ENST00000333617 TRGV11A0A075B6L2 103 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 CYSRT1A8MQ03 144 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 NDUFA7O95182 113 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 LGALS9BQ3B8N2 356 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 LGALS9CQ6DKI2 356 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 Q6ZN92 141 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 MRPL52Q86TS9 123 aaKnown RBP6.42□□□□□ -1.38
LSAMP-201ENST00000333617 Q8N1Y9 231 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 POM121L12Q8N7R1 296 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 TMEM158Q8WZ71 300 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 RASL10AQ92737 203 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 PMCHL2Q9BQD1 86 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 C20orf78Q9BR46 151 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 SMIM2Q9BVW6 85 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 MDFICQ9P1T7 246 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 KIF25-AS1Q9Y6Z4 181 aa6.42□□□□□ -1.38
LSAMP-201ENST00000333617 hDV102S1A0JD36 115 aa6.41□□□□□ -1.38
LSAMP-201ENST00000333617 CBY3A6NI87 242 aa6.41□□□□□ -1.38
LSAMP-201ENST00000333617 LY6G6DO95868 133 aa6.41□□□□□ -1.38
LSAMP-201ENST00000333617 SUMO2P61956 95 aaKnown RBP6.41□□□□□ -1.38
LSAMP-201ENST00000333617 RPL39LQ96EH5 51 aaKnown RBP6.41□□□□□ -1.38
LSAMP-201ENST00000333617 C18orf15Q96N68 181 aa6.41□□□□□ -1.38
LSAMP-201ENST00000333617 C2orf88Q9BSF0 95 aa6.41□□□□□ -1.38
LSAMP-201ENST00000333617 SNHG12Q9BXW3 62 aa6.41□□□□□ -1.38
LSAMP-201ENST00000333617 ZNF256Q9Y2P7 627 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-201ENST00000333617 GOLT1BQ9Y3E0 138 aa6.41□□□□□ -1.38
LSAMP-201ENST00000333617 RBMY1BA6NDE4 496 aaKnown RBP6.4□□□□□ -1.38
LSAMP-201ENST00000333617 RBMY1EA6NEQ0 496 aaKnown RBP6.4□□□□□ -1.38
LSAMP-201ENST00000333617 TCAPO15273 167 aa6.4□□□□□ -1.38
LSAMP-201ENST00000333617 RBMY1DP0C7P1 496 aaKnown RBP6.4□□□□□ -1.38
LSAMP-201ENST00000333617 HNRNPA3P51991 378 aaKnown RBP6.4□□□□□ -1.38
LSAMP-201ENST00000333617 LINC00315P59091 139 aa6.4□□□□□ -1.38
LSAMP-201ENST00000333617 JPT2Q9H910 190 aa6.4□□□□□ -1.38
LSAMP-201ENST00000333617 A0A087WWL8 130 aa6.4□□□□□ -1.39
LSAMP-201ENST00000333617 K7EMI3 77 aa6.4□□□□□ -1.39
LSAMP-201ENST00000333617 ATP5LO75964 103 aa6.4□□□□□ -1.39
LSAMP-201ENST00000333617 NUDT3O95989 172 aa6.4□□□□□ -1.39
LSAMP-201ENST00000333617 RBMY1A1P0DJD3 496 aaKnown RBP6.4□□□□□ -1.39
LSAMP-201ENST00000333617 RBMY1CP0DJD4 496 aa6.4□□□□□ -1.39
LSAMP-201ENST00000333617 RBMY1FQ15415 496 aaKnown RBP6.4□□□□□ -1.39
LSAMP-201ENST00000333617 ORMDL2Q53FV1 153 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms