RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TP53TG1Q9Y2A0 90 aa9.22□□□□□ -0.93
VPS33B-201ENST00000333371 TRAV12-2A0A075B6T6 113 aa9.22□□□□□ -0.93
VPS33B-201ENST00000333371 AVPP01185 164 aa9.22□□□□□ -0.93
VPS33B-201ENST00000333371 SCGB2A2Q13296 93 aa9.22□□□□□ -0.93
VPS33B-201ENST00000333371 FAM74A4Q5TZK3 123 aa9.22□□□□□ -0.93
VPS33B-201ENST00000333371 KIF25-AS1Q9Y6Z4 181 aa9.22□□□□□ -0.93
VPS33B-201ENST00000333371 LRRK2Q5S007 2527 aa9.21□□□□□ -0.93
VPS33B-201ENST00000333371 C11orf86A6NJI1 115 aa9.21□□□□□ -0.93
VPS33B-201ENST00000333371 F5H697 171 aa9.21□□□□□ -0.93
VPS33B-201ENST00000333371 RRN3P1Q2M238 152 aa9.21□□□□□ -0.93
VPS33B-201ENST00000333371 SUMO4Q6EEV6 95 aa9.21□□□□□ -0.93
VPS33B-201ENST00000333371 MORN3Q6PF18 240 aaPredicted RBP9.21□□□□□ -0.93
VPS33B-201ENST00000333371 CD7P09564 240 aa9.21□□□□□ -0.94
VPS33B-201ENST00000333371 INSL3P51460 131 aa9.21□□□□□ -0.94
VPS33B-201ENST00000333371 TAL2Q16559 108 aa9.21□□□□□ -0.94
VPS33B-201ENST00000333371 SCGB1D4Q6XE38 83 aa9.21□□□□□ -0.94
VPS33B-201ENST00000333371 A6NDX4 124 aa9.2□□□□□ -0.94
VPS33B-201ENST00000333371 ZNF843Q8N446 348 aa9.2□□□□□ -0.94
VPS33B-201ENST00000333371 DAZ1Q9NQZ3 744 aaKnown RBP9.2□□□□□ -0.94
VPS33B-201ENST00000333371 SPANXB1Q9NS25 103 aaPredicted RBP9.2□□□□□ -0.94
VPS33B-201ENST00000333371 ZNF688P0C7X2 276 aa9.2□□□□□ -0.94
VPS33B-201ENST00000333371 FAM159AQ6UWV7 190 aa9.2□□□□□ -0.94
VPS33B-201ENST00000333371 USMG5Q96IX5 58 aa9.2□□□□□ -0.94
VPS33B-201ENST00000333371 ATP6V0BQ99437 205 aa9.2□□□□□ -0.94
VPS33B-201ENST00000333371 GTSF1LQ9H1H1 148 aa9.2□□□□□ -0.94
VPS33B-201ENST00000333371 PGPEP1Q9NXJ5 209 aa9.2□□□□□ -0.94
VPS33B-201ENST00000333371 IGLV4-69A0A075B6H9 119 aa9.19□□□□□ -0.94
VPS33B-201ENST00000333371 GATA3P23771 443 aa9.19□□□□□ -0.94
VPS33B-201ENST00000333371 ZFP2Q6ZN57 461 aa9.19□□□□□ -0.94
VPS33B-201ENST00000333371 APRG1Q8IVJ8 170 aa9.19□□□□□ -0.94
VPS33B-201ENST00000333371 OPRPNQ99935 248 aaPredicted RBP9.19□□□□□ -0.94
VPS33B-201ENST00000333371 MDFICQ9P1T7 246 aa9.19□□□□□ -0.94
VPS33B-201ENST00000333371 ZNF256Q9Y2P7 627 aaPredicted RBP9.19□□□□□ -0.94
VPS33B-201ENST00000333371 TSSC4Q9Y5U2 329 aaPredicted RBP9.19□□□□□ -0.94
VPS33B-201ENST00000333371 KLLNB2CW77 178 aa9.18□□□□□ -0.94
VPS33B-201ENST00000333371 TSPEAR-AS2P59090 65 aa9.18□□□□□ -0.94
VPS33B-201ENST00000333371 LINC01356Q8N9X3 169 aa9.18□□□□□ -0.94
VPS33B-201ENST00000333371 DCANP1Q8TF63 244 aa9.18□□□□□ -0.94
VPS33B-201ENST00000333371 LINC01549A6NIU2 74 aa9.18□□□□□ -0.94
VPS33B-201ENST00000333371 HOXA3O43365 443 aaPredicted RBP9.18□□□□□ -0.94
VPS33B-201ENST00000333371 SRSF9Q13242 221 aaKnown RBP eCLIP9.18□□□□□ -0.94
VPS33B-201ENST00000333371 MYO9AB2RTY4 2548 aa9.18□□□□□ -0.94
VPS33B-201ENST00000333371 SDHAF1A6NFY7 115 aa9.18□□□□□ -0.94
VPS33B-201ENST00000333371 APOMO95445 188 aa9.18□□□□□ -0.94
VPS33B-201ENST00000333371 IGLV1-40P01703 118 aa9.18□□□□□ -0.94
VPS33B-201ENST00000333371 POLR2KP53803 58 aaKnown RBP9.18□□□□□ -0.94
VPS33B-201ENST00000333371 MRPL16Q9NX20 251 aaKnown RBP9.18□□□□□ -0.94
VPS33B-201ENST00000333371 PRO0461Q9UI25 63 aa9.18□□□□□ -0.94
VPS33B-201ENST00000333371 A0A1B0GWB2 263 aa9.17□□□□□ -0.94
VPS33B-201ENST00000333371 IGIPA6NJ69 53 aa9.17□□□□□ -0.94
VPS33B-201ENST00000333371 MED14OSP0DP75 135 aa9.17□□□□□ -0.94
VPS33B-201ENST00000333371 GAGE13Q4V321 117 aa9.17□□□□□ -0.94
VPS33B-201ENST00000333371 SPAG8Q99932 426 aaPredicted RBP9.17□□□□□ -0.94
VPS33B-201ENST00000333371 NACAE9PAV3 2078 aa9.17□□□□□ -0.94
VPS33B-201ENST00000333371 F8W1H4 67 aa9.17□□□□□ -0.94
VPS33B-201ENST00000333371 NXPH4O95158 308 aa9.17□□□□□ -0.94
VPS33B-201ENST00000333371 MAPK1IP1LQ8NDC0 245 aa9.17□□□□□ -0.94
VPS33B-201ENST00000333371 DUX5Q96PT3 197 aa9.17□□□□□ -0.94
VPS33B-201ENST00000333371 TGFAP01135 160 aa9.16□□□□□ -0.94
VPS33B-201ENST00000333371 TMEM170BQ5T4T1 132 aa9.16□□□□□ -0.94
VPS33B-201ENST00000333371 ZNRF2Q8NHG8 242 aa9.16□□□□□ -0.94
VPS33B-201ENST00000333371 TLN2Q9Y4G6 2542 aa9.16□□□□□ -0.94
VPS33B-201ENST00000333371 SMAGPQ0VAQ4 97 aa9.16□□□□□ -0.94
VPS33B-201ENST00000333371 EPG5Q9HCE0 2579 aa9.15□□□□□ -0.94
VPS33B-201ENST00000333371 IGHV4OR15-8A0A075B7B6 117 aa9.15□□□□□ -0.94
VPS33B-201ENST00000333371 A0A087WW49 117 aa9.15□□□□□ -0.94
VPS33B-201ENST00000333371 LOC107984156A0A0G2JMH3 177 aa9.15□□□□□ -0.94
VPS33B-201ENST00000333371 H3BUA1 57 aa9.15□□□□□ -0.94
VPS33B-201ENST00000333371 IGHV4-59P01825 116 aa9.15□□□□□ -0.94
VPS33B-201ENST00000333371 AZU1P20160 251 aa9.15□□□□□ -0.94
VPS33B-201ENST00000333371 SPINK13Q1W4C9 94 aa9.15□□□□□ -0.94
VPS33B-201ENST00000333371 ARL17AQ8IVW1 177 aa9.15□□□□□ -0.94
VPS33B-201ENST00000333371 POM121L12Q8N7R1 296 aa9.15□□□□□ -0.94
VPS33B-201ENST00000333371 FBN2P35556 2912 aa9.15□□□□□ -0.94
VPS33B-201ENST00000333371 CFHR3Q02985 330 aa9.15□□□□□ -0.95
VPS33B-201ENST00000333371 PMVKQ15126 192 aa9.15□□□□□ -0.95
VPS33B-201ENST00000333371 ZNF56Q15929 161 aa9.15□□□□□ -0.95
VPS33B-201ENST00000333371 NOTCH3Q9UM47 2321 aa9.14□□□□□ -0.95
VPS33B-201ENST00000333371 IGHV3-64A0A075B6Q5 118 aa9.14□□□□□ -0.95
VPS33B-201ENST00000333371 Q8N1Y9 231 aa9.14□□□□□ -0.95
VPS33B-201ENST00000333371 KIR2DL4Q99706 377 aa9.14□□□□□ -0.95
VPS33B-201ENST00000333371 TEX15Q9BXT5 2789 aa9.14□□□□□ -0.95
VPS33B-201ENST00000333371 A0A0J9YY99 117 aa9.14□□□□□ -0.95
VPS33B-201ENST00000333371 LINC01619G3V211 115 aa9.14□□□□□ -0.95
VPS33B-201ENST00000333371 TSPAN13O95857 204 aa9.14□□□□□ -0.95
VPS33B-201ENST00000333371 DEFB112Q30KQ8 113 aa9.14□□□□□ -0.95
VPS33B-201ENST00000333371 PTPN13Q12923 2485 aa9.14□□□□□ -0.95
VPS33B-201ENST00000333371 VCYO14598 125 aa9.13□□□□□ -0.95
VPS33B-201ENST00000333371 PRM2P04554 102 aa9.13□□□□□ -0.95
VPS33B-201ENST00000333371 SMCPP49901 116 aaPredicted RBP9.13□□□□□ -0.95
VPS33B-201ENST00000333371 WNK1Q9H4A3 2382 aa9.13□□□□□ -0.95
VPS33B-201ENST00000333371 ABCA12Q86UK0 2595 aa9.13□□□□□ -0.95
VPS33B-201ENST00000333371 IGHV3-16A0A0C4DH30 117 aa9.13□□□□□ -0.95
VPS33B-201ENST00000333371 GAGE12HA6NDE8 117 aa9.13□□□□□ -0.95
VPS33B-201ENST00000333371 J3QLI3 93 aa9.13□□□□□ -0.95
VPS33B-201ENST00000333371 PPP1R17O96001 155 aa9.13□□□□□ -0.95
VPS33B-201ENST00000333371 ID1P41134 155 aa9.13□□□□□ -0.95
VPS33B-201ENST00000333371 PSMB2P49721 201 aa9.13□□□□□ -0.95
VPS33B-201ENST00000333371 UBE2D1P51668 147 aa9.13□□□□□ -0.95
VPS33B-201ENST00000333371 SAMD13Q5VXD3 122 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms