RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 GAGE12IP0CL82 117 aa12.18□□□□□ -0.46
SYNM-201ENST00000328642 CITED2Q99967 270 aaPredicted RBP12.18□□□□□ -0.46
SYNM-201ENST00000328642 TRAV13-1A0A0B4J241 112 aa12.18□□□□□ -0.46
SYNM-201ENST00000328642 SAMD13Q5VXD3 122 aa12.18□□□□□ -0.46
SYNM-201ENST00000328642 MTURNQ8N3F0 131 aa12.18□□□□□ -0.46
SYNM-201ENST00000328642 MEGF9Q9H1U4 602 aa12.18□□□□□ -0.46
SYNM-201ENST00000328642 C11orf68Q9H3H3 251 aaKnown RBP12.18□□□□□ -0.46
SYNM-201ENST00000328642 GCN1Q92616 2671 aaKnown RBP12.18□□□□□ -0.46
SYNM-201ENST00000328642 TRAV2A0A0B4J234 112 aa12.18□□□□□ -0.46
SYNM-201ENST00000328642 VCYO14598 125 aa12.18□□□□□ -0.46
SYNM-201ENST00000328642 SMIM13P0DJ93 91 aa12.18□□□□□ -0.46
SYNM-201ENST00000328642 DLX4Q92988 240 aaPredicted RBP12.18□□□□□ -0.46
SYNM-201ENST00000328642 UTP20O75691 2785 aaKnown RBP12.17□□□□□ -0.46
SYNM-201ENST00000328642 GAGE12JA6NER3 117 aa12.17□□□□□ -0.46
SYNM-201ENST00000328642 GAGE1Q13065 139 aa12.17□□□□□ -0.46
SYNM-201ENST00000328642 GAGE4Q13068 117 aa12.17□□□□□ -0.46
SYNM-201ENST00000328642 GAGE5Q13069 117 aa12.17□□□□□ -0.46
SYNM-201ENST00000328642 GAGE13Q4V321 117 aa12.17□□□□□ -0.46
SYNM-201ENST00000328642 ANKRD39Q53RE8 183 aa12.17□□□□□ -0.46
SYNM-201ENST00000328642 Q8N1Y9 231 aa12.17□□□□□ -0.46
SYNM-201ENST00000328642 SMIM2Q9BVW6 85 aa12.17□□□□□ -0.46
SYNM-201ENST00000328642 MRAP2Q96G30 205 aa12.17□□□□□ -0.46
SYNM-201ENST00000328642 C2orf88Q9BSF0 95 aa12.17□□□□□ -0.46
SYNM-201ENST00000328642 DLEU1O43261 78 aa12.17□□□□□ -0.46
SYNM-201ENST00000328642 CHCHD5Q9BSY4 110 aa12.17□□□□□ -0.46
SYNM-201ENST00000328642 MUC4Q99102 2169 aa12.16□□□□□ -0.46
SYNM-201ENST00000328642 C11orf21Q9P2W6 132 aa12.16□□□□□ -0.46
SYNM-201ENST00000328642 A0A1B0GXF2 115 aa12.16□□□□□ -0.46
SYNM-201ENST00000328642 ADARB2-AS1A8MUL3 147 aa12.16□□□□□ -0.46
SYNM-201ENST00000328642 INSP01308 110 aa12.16□□□□□ -0.46
SYNM-201ENST00000328642 Q8N8P6 123 aa12.16□□□□□ -0.46
SYNM-201ENST00000328642 FSTL3O95633 263 aa12.15□□□□□ -0.46
SYNM-201ENST00000328642 ZNF415Q09FC8 603 aa12.15□□□□□ -0.46
SYNM-201ENST00000328642 RPL39P62891 51 aaKnown RBP12.15□□□□□ -0.46
SYNM-201ENST00000328642 ORAOV1Q8WV07 137 aa12.15□□□□□ -0.46
SYNM-201ENST00000328642 ESM1Q9NQ30 184 aa12.15□□□□□ -0.46
SYNM-201ENST00000328642 TRAV8-2A0A0B4J237 113 aa12.14□□□□□ -0.47
SYNM-201ENST00000328642 CIDEAO60543 219 aa12.14□□□□□ -0.47
SYNM-201ENST00000328642 PRR9Q5T870 116 aa12.14□□□□□ -0.47
SYNM-201ENST00000328642 OR9G4Q8NGQ1 327 aa12.14□□□□□ -0.47
SYNM-201ENST00000328642 SPCS1Q9Y6A9 102 aa12.14□□□□□ -0.47
SYNM-201ENST00000328642 KLF5Q13887 457 aaPredicted RBP12.14□□□□□ -0.47
SYNM-201ENST00000328642 ZNRF2Q8NHG8 242 aa12.14□□□□□ -0.47
SYNM-201ENST00000328642 LINC00310P59036 64 aa12.13□□□□□ -0.47
SYNM-201ENST00000328642 CLPSL1A2RUU4 121 aa12.13□□□□□ -0.47
SYNM-201ENST00000328642 PIFOQ8TCI5 191 aa12.13□□□□□ -0.47
SYNM-201ENST00000328642 DNAJC9-AS1A6NH13 148 aa12.12□□□□□ -0.47
SYNM-201ENST00000328642 H3BUA1 57 aa12.12□□□□□ -0.47
SYNM-201ENST00000328642 P0DMU3 169 aa12.12□□□□□ -0.47
SYNM-201ENST00000328642 FAM231AP0DMU4 169 aa12.12□□□□□ -0.47
SYNM-201ENST00000328642 FAM231CP0DMU5 169 aa12.12□□□□□ -0.47
SYNM-201ENST00000328642 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
SYNM-201ENST00000328642 C9orf47Q6ZRZ4 202 aa12.12□□□□□ -0.47
SYNM-201ENST00000328642 DEFB4AO15263 64 aa12.11□□□□□ -0.47
SYNM-201ENST00000328642 IGHG4P01861 327 aa12.11□□□□□ -0.47
SYNM-201ENST00000328642 ZNF48Q96MX3 618 aaPredicted RBP12.11□□□□□ -0.47
SYNM-201ENST00000328642 OPRPNQ99935 248 aaPredicted RBP12.11□□□□□ -0.47
SYNM-201ENST00000328642 PAX2Q02962 417 aa12.11□□□□□ -0.47
SYNM-201ENST00000328642 ADAMTSL5Q6ZMM2 481 aa12.11□□□□□ -0.47
SYNM-201ENST00000328642 NOP10Q9NPE3 64 aaKnown RBP12.11□□□□□ -0.47
SYNM-201ENST00000328642 PAPPA-AS1Q5QFB9 102 aa12.11□□□□□ -0.47
SYNM-201ENST00000328642 GPHB5Q86YW7 130 aa12.1□□□□□ -0.47
SYNM-201ENST00000328642 U3KQE9 123 aa12.1□□□□□ -0.47
SYNM-201ENST00000328642 K7ERJ3 54 aa12.1□□□□□ -0.47
SYNM-201ENST00000328642 AZU1P20160 251 aa12.1□□□□□ -0.47
SYNM-201ENST00000328642 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.09□□□□□ -0.47
SYNM-201ENST00000328642 KIR2DL5BA0A0G2JN68 375 aa12.09□□□□□ -0.47
SYNM-201ENST00000328642 KIR2DL5BA0A0G2JPC4 375 aa12.09□□□□□ -0.47
SYNM-201ENST00000328642 IGKV2-29A2NJV5 120 aaPredicted RBP12.09□□□□□ -0.47
SYNM-201ENST00000328642 RBAKDNA6NC62 111 aa12.09□□□□□ -0.47
SYNM-201ENST00000328642 KIR2DL5AQ8N109 375 aa12.09□□□□□ -0.47
SYNM-201ENST00000328642 ATP6V0BQ99437 205 aa12.09□□□□□ -0.47
SYNM-201ENST00000328642 SUMO4Q6EEV6 95 aa12.09□□□□□ -0.47
SYNM-201ENST00000328642 DCHS2Q6V1P9 2916 aa12.09□□□□□ -0.47
SYNM-201ENST00000328642 UBR5O95071 2799 aaPredicted RBP12.09□□□□□ -0.47
SYNM-201ENST00000328642 TMEM238LA0A1B0GVL6 79 aa12.09□□□□□ -0.47
SYNM-201ENST00000328642 A6NJY4 79 aa12.09□□□□□ -0.47
SYNM-201ENST00000328642 CHAC1Q9BUX1 264 aa12.09□□□□□ -0.47
SYNM-201ENST00000328642 PRSS29PA6NIE9 313 aa12.08□□□□□ -0.48
SYNM-201ENST00000328642 CD5LO43866 347 aa12.08□□□□□ -0.48
SYNM-201ENST00000328642 RPL36AP83881 106 aaKnown RBP12.08□□□□□ -0.48
SYNM-201ENST00000328642 RPL36ALQ969Q0 106 aaKnown RBP12.08□□□□□ -0.48
SYNM-201ENST00000328642 CTRLP40313 264 aa12.07□□□□□ -0.48
SYNM-201ENST00000328642 Q6YL49 198 aa12.07□□□□□ -0.48
SYNM-201ENST00000328642 MRPL53Q96EL3 112 aaKnown RBP12.07□□□□□ -0.48
SYNM-201ENST00000328642 WFDC10AQ9H1F0 79 aa12.07□□□□□ -0.48
SYNM-201ENST00000328642 CEMP1Q6PRD7 247 aaPredicted RBP12.07□□□□□ -0.48
SYNM-201ENST00000328642 FOXI2Q6ZQN5 318 aa12.07□□□□□ -0.48
SYNM-201ENST00000328642 TMEM101Q96IK0 257 aa12.07□□□□□ -0.48
SYNM-201ENST00000328642 HSD52Q0P140 79 aa12.07□□□□□ -0.48
SYNM-201ENST00000328642 Q6ZSV7 163 aa12.07□□□□□ -0.48
SYNM-201ENST00000328642 ZFAND2AQ8N6M9 145 aa12.07□□□□□ -0.48
SYNM-201ENST00000328642 OR13C6PQ8NH95 151 aa12.07□□□□□ -0.48
SYNM-201ENST00000328642 PRADC1Q9BSG0 188 aa12.07□□□□□ -0.48
SYNM-201ENST00000328642 ITPR2Q14571 2701 aa12.07□□□□□ -0.48
SYNM-201ENST00000328642 A0A0J9YX75 114 aa12.06□□□□□ -0.48
SYNM-201ENST00000328642 MRPS12O15235 138 aaKnown RBP12.06□□□□□ -0.48
SYNM-201ENST00000328642 GATD1Q8NB37 220 aa12.06□□□□□ -0.48
SYNM-201ENST00000328642 J3QR89 54 aa12.06□□□□□ -0.48
SYNM-201ENST00000328642 ESDP10768 282 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms