RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 RPL39LQ96EH5 51 aaKnown RBP10.94□□□□□ -0.66
TPM3-205ENST00000328159 C20orf78Q9BR46 151 aa10.94□□□□□ -0.66
TPM3-205ENST00000328159 LINC00467Q9BRT7 94 aa10.94□□□□□ -0.66
TPM3-205ENST00000328159 SMIM2Q9BVW6 85 aa10.94□□□□□ -0.66
TPM3-205ENST00000328159 A0A087WWL8 130 aa10.93□□□□□ -0.66
TPM3-205ENST00000328159 HTN1P15515 57 aa10.93□□□□□ -0.66
TPM3-205ENST00000328159 BEAN1Q3B7T3 259 aa10.93□□□□□ -0.66
TPM3-205ENST00000328159 SPATA45Q537H7 98 aa10.93□□□□□ -0.66
TPM3-205ENST00000328159 LINC00482Q8N8I6 264 aa10.93□□□□□ -0.66
TPM3-205ENST00000328159 H0Y8G0 127 aa10.93□□□□□ -0.66
TPM3-205ENST00000328159 PPP1R17O96001 155 aa10.93□□□□□ -0.66
TPM3-205ENST00000328159 SUMO2P61956 95 aaKnown RBP10.93□□□□□ -0.66
TPM3-205ENST00000328159 SUMO4Q6EEV6 95 aa10.93□□□□□ -0.66
TPM3-205ENST00000328159 LINC01587Q99440 93 aa10.93□□□□□ -0.66
TPM3-205ENST00000328159 LAGE3Q14657 143 aa10.92□□□□□ -0.66
TPM3-205ENST00000328159 ZNF876PQ49A33 203 aa10.92□□□□□ -0.66
TPM3-205ENST00000328159 TMEM158Q8WZ71 300 aa10.92□□□□□ -0.66
TPM3-205ENST00000328159 FAM110AQ9BQ89 295 aa10.92□□□□□ -0.66
TPM3-205ENST00000328159 XCL2Q9UBD3 114 aa10.92□□□□□ -0.66
TPM3-205ENST00000328159 TRAV9-2A0A087WT02 112 aa10.91□□□□□ -0.66
TPM3-205ENST00000328159 TCAPO15273 167 aa10.91□□□□□ -0.66
TPM3-205ENST00000328159 DEFA6Q01524 100 aa10.91□□□□□ -0.66
TPM3-205ENST00000328159 ZNF415Q09FC8 603 aa10.91□□□□□ -0.66
TPM3-205ENST00000328159 MAJINQ3KP22 176 aa10.91□□□□□ -0.66
TPM3-205ENST00000328159 LINC01545Q5VT33 79 aa10.91□□□□□ -0.66
TPM3-205ENST00000328159 ZNF705AQ6ZN79 300 aaPredicted RBP10.91□□□□□ -0.66
TPM3-205ENST00000328159 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.91□□□□□ -0.66
TPM3-205ENST00000328159 F5H697 171 aa10.9□□□□□ -0.66
TPM3-205ENST00000328159 PRM2P04554 102 aa10.9□□□□□ -0.66
TPM3-205ENST00000328159 CRYGDP07320 174 aa10.9□□□□□ -0.66
TPM3-205ENST00000328159 FAM74A4Q5TZK3 123 aa10.9□□□□□ -0.66
TPM3-205ENST00000328159 IFI27L1Q96BM0 104 aa10.9□□□□□ -0.66
TPM3-205ENST00000328159 NDUFAF3Q9BU61 184 aa10.9□□□□□ -0.66
TPM3-205ENST00000328159 MCRIP2Q9BUT9 160 aaKnown RBP10.9□□□□□ -0.66
TPM3-205ENST00000328159 NUTF2P61970 127 aaKnown RBP10.9□□□□□ -0.67
TPM3-205ENST00000328159 C19orf73Q9NVV2 129 aa10.9□□□□□ -0.67
TPM3-205ENST00000328159 ZNF56Q15929 161 aa10.89□□□□□ -0.67
TPM3-205ENST00000328159 MIEN1Q9BRT3 115 aa10.89□□□□□ -0.67
TPM3-205ENST00000328159 M0R2P5 195 aa10.88□□□□□ -0.67
TPM3-205ENST00000328159 C1orf158Q8N1D5 194 aa10.88□□□□□ -0.67
TPM3-205ENST00000328159 C11orf72Q8NBR9 251 aa10.88□□□□□ -0.67
TPM3-205ENST00000328159 PTH2Q96A98 100 aa10.88□□□□□ -0.67
TPM3-205ENST00000328159 C14orf144Q96I85 54 aa10.88□□□□□ -0.67
TPM3-205ENST00000328159 C18orf15Q96N68 181 aa10.88□□□□□ -0.67
TPM3-205ENST00000328159 PMCHL2Q9BQD1 86 aa10.88□□□□□ -0.67
TPM3-205ENST00000328159 TMEM208Q9BTX3 173 aa10.88□□□□□ -0.67
TPM3-205ENST00000328159 WFDC10AQ9H1F0 79 aa10.88□□□□□ -0.67
TPM3-205ENST00000328159 ST20Q9HBF5 79 aa10.88□□□□□ -0.67
TPM3-205ENST00000328159 K7EMI3 77 aa10.88□□□□□ -0.67
TPM3-205ENST00000328159 RPL32P62910 135 aaKnown RBP10.88□□□□□ -0.67
TPM3-205ENST00000328159 CSTL1Q9H114 145 aa10.88□□□□□ -0.67
TPM3-205ENST00000328159 F8P00451 2351 aa10.87□□□□□ -0.67
TPM3-205ENST00000328159 FLNBO75369 2602 aaKnown RBP10.87□□□□□ -0.67
TPM3-205ENST00000328159 NUDT3O95989 172 aa10.87□□□□□ -0.67
TPM3-205ENST00000328159 IGLL1P15814 213 aa10.87□□□□□ -0.67
TPM3-205ENST00000328159 LGALS9BQ3B8N2 356 aa10.87□□□□□ -0.67
TPM3-205ENST00000328159 ORMDL2Q53FV1 153 aa10.87□□□□□ -0.67
TPM3-205ENST00000328159 PIK3CD-AS1Q5SR53 167 aa10.87□□□□□ -0.67
TPM3-205ENST00000328159 LGALS9CQ6DKI2 356 aa10.87□□□□□ -0.67
TPM3-205ENST00000328159 SPXQ9BT56 116 aa10.87□□□□□ -0.67
TPM3-205ENST00000328159 TRBV6-5A0A0K0K1A5 114 aa10.86□□□□□ -0.67
TPM3-205ENST00000328159 IGLC3P0DOY3 106 aa10.86□□□□□ -0.67
TPM3-205ENST00000328159 CITED1Q99966 193 aa10.86□□□□□ -0.67
TPM3-205ENST00000328159 IGHV3OR16-12A0A075B7B8 117 aa10.85□□□□□ -0.67
TPM3-205ENST00000328159 M0QY20 66 aa10.85□□□□□ -0.67
TPM3-205ENST00000328159 POLR2KP53803 58 aaKnown RBP10.85□□□□□ -0.67
TPM3-205ENST00000328159 JMJD1CQ15652 2540 aa10.85□□□□□ -0.67
TPM3-205ENST00000328159 hDV102S1A0JD36 115 aa10.85□□□□□ -0.67
TPM3-205ENST00000328159 A8MWV9 139 aa10.85□□□□□ -0.67
TPM3-205ENST00000328159 ATP5LO75964 103 aa10.85□□□□□ -0.67
TPM3-205ENST00000328159 GIG44P09565 113 aaPredicted RBP10.85□□□□□ -0.67
TPM3-205ENST00000328159 AZU1P20160 251 aa10.85□□□□□ -0.67
TPM3-205ENST00000328159 MORN3Q6PF18 240 aaPredicted RBP10.85□□□□□ -0.67
TPM3-205ENST00000328159 NEGR1Q7Z3B1 354 aa10.85□□□□□ -0.67
TPM3-205ENST00000328159 UQCR10Q9UDW1 63 aa10.85□□□□□ -0.67
TPM3-205ENST00000328159 HSBP1L1C9JCN9 74 aa10.84□□□□□ -0.67
TPM3-205ENST00000328159 VCYO14598 125 aa10.84□□□□□ -0.67
TPM3-205ENST00000328159 RPL35AP18077 110 aaKnown RBP10.84□□□□□ -0.67
TPM3-205ENST00000328159 INSL3P51460 131 aa10.84□□□□□ -0.67
TPM3-205ENST00000328159 GOLT1BQ9Y3E0 138 aa10.84□□□□□ -0.67
TPM3-205ENST00000328159 SDHAF1A6NFY7 115 aa10.83□□□□□ -0.68
TPM3-205ENST00000328159 C9orf66Q5T8R8 295 aa10.83□□□□□ -0.68
TPM3-205ENST00000328159 SPATA3Q8NHX4 192 aa10.83□□□□□ -0.68
TPM3-205ENST00000328159 NACAE9PAV3 2078 aa10.83□□□□□ -0.68
TPM3-205ENST00000328159 PRSS1P07477 247 aa10.82□□□□□ -0.68
TPM3-205ENST00000328159 UFSP1Q6NVU6 142 aa10.82□□□□□ -0.68
TPM3-205ENST00000328159 TOMM6Q96B49 74 aa10.82□□□□□ -0.68
TPM3-205ENST00000328159 MRPL16Q9NX20 251 aaKnown RBP10.82□□□□□ -0.68
TPM3-205ENST00000328159 IGHV3-73A0A0B4J1V6 119 aa10.82□□□□□ -0.68
TPM3-205ENST00000328159 IL17DQ8TAD2 202 aa10.82□□□□□ -0.68
TPM3-205ENST00000328159 C1QTNF4Q9BXJ3 329 aa10.82□□□□□ -0.68
TPM3-205ENST00000328159 EDA2RQ9HAV5 297 aa10.82□□□□□ -0.68
TPM3-205ENST00000328159 TRBV27A0A0K0K1C4 114 aa10.81□□□□□ -0.68
TPM3-205ENST00000328159 H7C1H1 209 aa10.81□□□□□ -0.68
TPM3-205ENST00000328159 CFAP126Q5VTH2 177 aa10.81□□□□□ -0.68
TPM3-205ENST00000328159 C2orf66Q6UXQ4 117 aa10.81□□□□□ -0.68
TPM3-205ENST00000328159 RNASE8Q8TDE3 154 aaKnown RBP10.81□□□□□ -0.68
TPM3-205ENST00000328159 KIR2DL4Q99706 377 aa10.81□□□□□ -0.68
TPM3-205ENST00000328159 DKK2Q9UBU2 259 aa10.81□□□□□ -0.68
TPM3-205ENST00000328159 RS1O15537 224 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms