RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 TIMM17AQ99595 171 aa12.58□□□□□ -0.4
SSH1-201ENST00000326470 ZFYVE26Q68DK2 2539 aa12.58□□□□□ -0.4
SSH1-201ENST00000326470 COL12A1Q99715 3063 aa12.57□□□□□ -0.4
SSH1-201ENST00000326470 F6UB75 175 aa12.57□□□□□ -0.4
SSH1-201ENST00000326470 CRIP2P52943 208 aaPredicted RBP12.57□□□□□ -0.4
SSH1-201ENST00000326470 TMEM219Q86XT9 240 aa12.57□□□□□ -0.4
SSH1-201ENST00000326470 VCX2Q9H322 139 aa12.57□□□□□ -0.4
SSH1-201ENST00000326470 VCYO14598 125 aa12.57□□□□□ -0.4
SSH1-201ENST00000326470 TSPEAR-AS2P59090 65 aa12.57□□□□□ -0.4
SSH1-201ENST00000326470 Q6ZUT4 128 aa12.57□□□□□ -0.4
SSH1-201ENST00000326470 C10orf126Q8N4M7 172 aa12.57□□□□□ -0.4
SSH1-201ENST00000326470 MOB4Q9Y3A3 225 aa12.57□□□□□ -0.4
SSH1-201ENST00000326470 SVEP1Q4LDE5 3571 aa12.56□□□□□ -0.4
SSH1-201ENST00000326470 MT-ATP8P03928 68 aa12.56□□□□□ -0.4
SSH1-201ENST00000326470 RPL39P62891 51 aaKnown RBP12.56□□□□□ -0.4
SSH1-201ENST00000326470 KIR2DL4Q99706 377 aa12.56□□□□□ -0.4
SSH1-201ENST00000326470 GEMIN7Q9H840 131 aaKnown RBP12.56□□□□□ -0.4
SSH1-201ENST00000326470 CFAP46Q8IYW2 2715 aa12.56□□□□□ -0.4
SSH1-201ENST00000326470 HRNRQ86YZ3 2850 aaPredicted RBP12.55□□□□□ -0.4
SSH1-201ENST00000326470 A8MWV9 139 aa12.55□□□□□ -0.4
SSH1-201ENST00000326470 XGP55808 180 aa12.55□□□□□ -0.4
SSH1-201ENST00000326470 RPL11P62913 178 aaKnown RBP12.55□□□□□ -0.4
SSH1-201ENST00000326470 ZNF876PQ49A33 203 aa12.55□□□□□ -0.4
SSH1-201ENST00000326470 TMEM170BQ5T4T1 132 aa12.55□□□□□ -0.4
SSH1-201ENST00000326470 SUMO4Q6EEV6 95 aa12.55□□□□□ -0.4
SSH1-201ENST00000326470 ZNRF2Q8NHG8 242 aa12.55□□□□□ -0.4
SSH1-201ENST00000326470 AMELXQ99217 191 aa12.55□□□□□ -0.4
SSH1-201ENST00000326470 MUC4Q99102 2169 aa12.54□□□□□ -0.4
SSH1-201ENST00000326470 CLUHP3Q96NS8 147 aa12.54□□□□□ -0.4
SSH1-201ENST00000326470 LMO4P61968 165 aa12.53□□□□□ -0.4
SSH1-201ENST00000326470 DEFB104AQ8WTQ1 72 aa12.53□□□□□ -0.4
SSH1-201ENST00000326470 JPT2Q9H910 190 aa12.53□□□□□ -0.4
SSH1-201ENST00000326470 PRO1854Q9UHT4 67 aa12.53□□□□□ -0.4
SSH1-201ENST00000326470 A0A1W2PPR1 153 aa12.53□□□□□ -0.4
SSH1-201ENST00000326470 SDHAF1A6NFY7 115 aa12.53□□□□□ -0.4
SSH1-201ENST00000326470 EPG5Q9HCE0 2579 aa12.52□□□□□ -0.4
SSH1-201ENST00000326470 TRAV26-1A0A087WT03 109 aa12.52□□□□□ -0.4
SSH1-201ENST00000326470 KLLNB2CW77 178 aa12.52□□□□□ -0.4
SSH1-201ENST00000326470 J3QQQ9 107 aa12.52□□□□□ -0.4
SSH1-201ENST00000326470 FAM159AQ6UWV7 190 aa12.52□□□□□ -0.4
SSH1-201ENST00000326470 IGSF10Q6WRI0 2623 aa12.52□□□□□ -0.41
SSH1-201ENST00000326470 TRBV27A0A0K0K1C4 114 aa12.52□□□□□ -0.41
SSH1-201ENST00000326470 SCGB1C2P0DMR2 95 aa12.52□□□□□ -0.41
SSH1-201ENST00000326470 PRORYQ9H606 182 aa12.52□□□□□ -0.41
SSH1-201ENST00000326470 USP24Q9UPU5 2620 aa12.52□□□□□ -0.41
SSH1-201ENST00000326470 IGKV3-7A0A075B6H7 116 aa12.51□□□□□ -0.41
SSH1-201ENST00000326470 ZNF688P0C7X2 276 aa12.51□□□□□ -0.41
SSH1-201ENST00000326470 WFDC12Q8WWY7 111 aa12.51□□□□□ -0.41
SSH1-201ENST00000326470 A0A087WWL8 130 aa12.51□□□□□ -0.41
SSH1-201ENST00000326470 TRBV6-5A0A0K0K1A5 114 aa12.51□□□□□ -0.41
SSH1-201ENST00000326470 F5H697 171 aa12.51□□□□□ -0.41
SSH1-201ENST00000326470 LGALS3P17931 250 aaKnown RBP12.51□□□□□ -0.41
SSH1-201ENST00000326470 LGALS9O00182 355 aa12.5□□□□□ -0.41
SSH1-201ENST00000326470 ANKRD29Q8N6D5 301 aa12.5□□□□□ -0.41
SSH1-201ENST00000326470 USMG5Q96IX5 58 aa12.5□□□□□ -0.41
SSH1-201ENST00000326470 RHPN1-AS1Q9BWJ2 59 aa12.5□□□□□ -0.41
SSH1-201ENST00000326470 BPESC1Q9GZL8 116 aa12.5□□□□□ -0.41
SSH1-201ENST00000326470 BRI3O95415 125 aa12.49□□□□□ -0.41
SSH1-201ENST00000326470 TGFAP01135 160 aa12.49□□□□□ -0.41
SSH1-201ENST00000326470 IGHV3-11P01762 117 aa12.49□□□□□ -0.41
SSH1-201ENST00000326470 A4D1N5 150 aa12.48□□□□□ -0.41
SSH1-201ENST00000326470 M0QXV9 152 aa12.48□□□□□ -0.41
SSH1-201ENST00000326470 SPTBN1Q01082 2364 aaKnown RBP12.48□□□□□ -0.41
SSH1-201ENST00000326470 TMEM262E9PQX1 116 aa12.48□□□□□ -0.41
SSH1-201ENST00000326470 H3BUA1 57 aa12.48□□□□□ -0.41
SSH1-201ENST00000326470 IGHV1-69P01742 117 aa12.48□□□□□ -0.41
SSH1-201ENST00000326470 IGHV3OR16-10A0A075B7F0 116 aa12.47□□□□□ -0.41
SSH1-201ENST00000326470 TMEM223A0PJW6 202 aa12.47□□□□□ -0.41
SSH1-201ENST00000326470 LEPROTO15243 131 aa12.47□□□□□ -0.41
SSH1-201ENST00000326470 IGHV3-33P01772 117 aa12.47□□□□□ -0.41
SSH1-201ENST00000326470 Q5PR19 223 aa12.47□□□□□ -0.41
SSH1-201ENST00000326470 SLC25A20O43772 301 aa12.47□□□□□ -0.41
SSH1-201ENST00000326470 RAX2Q96IS3 184 aa12.47□□□□□ -0.41
SSH1-201ENST00000326470 EIF4EBP3O60516 100 aaPredicted RBP12.46□□□□□ -0.41
SSH1-201ENST00000326470 LY6DQ14210 128 aa12.46□□□□□ -0.41
SSH1-201ENST00000326470 RHOHQ15669 191 aa12.46□□□□□ -0.41
SSH1-201ENST00000326470 NSUN5P1Q3KNT7 163 aa12.46□□□□□ -0.41
SSH1-201ENST00000326470 TMEM263Q8WUH6 116 aaKnown RBP12.46□□□□□ -0.41
SSH1-201ENST00000326470 ZNF256Q9Y2P7 627 aaPredicted RBP12.46□□□□□ -0.41
SSH1-201ENST00000326470 A0A0B4J2C4 111 aa12.46□□□□□ -0.42
SSH1-201ENST00000326470 UBTD1Q9HAC8 227 aa12.46□□□□□ -0.42
SSH1-201ENST00000326470 DAZ1Q9NQZ3 744 aaKnown RBP12.46□□□□□ -0.42
SSH1-201ENST00000326470 TRAV12-3A0A0B4J271 114 aa12.45□□□□□ -0.42
SSH1-201ENST00000326470 SRD5A1P18405 259 aa12.45□□□□□ -0.42
SSH1-201ENST00000326470 FAM74A4Q5TZK3 123 aa12.45□□□□□ -0.42
SSH1-201ENST00000326470 ERG28Q9UKR5 140 aa12.45□□□□□ -0.42
SSH1-201ENST00000326470 C9JAW5 83 aa12.45□□□□□ -0.42
SSH1-201ENST00000326470 M0QY20 66 aa12.45□□□□□ -0.42
SSH1-201ENST00000326470 IGHG2P01859 326 aa12.45□□□□□ -0.42
SSH1-201ENST00000326470 ID1P41134 155 aa12.45□□□□□ -0.42
SSH1-201ENST00000326470 C9orf85Q96MD7 179 aa12.45□□□□□ -0.42
SSH1-201ENST00000326470 OPRPNQ99935 248 aaPredicted RBP12.45□□□□□ -0.42
SSH1-201ENST00000326470 P0DMU3 169 aa12.44□□□□□ -0.42
SSH1-201ENST00000326470 FAM231AP0DMU4 169 aa12.44□□□□□ -0.42
SSH1-201ENST00000326470 FAM231CP0DMU5 169 aa12.44□□□□□ -0.42
SSH1-201ENST00000326470 PF4V1P10720 104 aa12.44□□□□□ -0.42
SSH1-201ENST00000326470 IGHV3-16A0A0C4DH30 117 aa12.43□□□□□ -0.42
SSH1-201ENST00000326470 BRD3OSQ6XYD6 125 aa12.43□□□□□ -0.42
SSH1-201ENST00000326470 ASH1LQ9NR48 2969 aaKnown RBP12.43□□□□□ -0.42
SSH1-201ENST00000326470 TRAV2A0A0B4J234 112 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms