RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 RRN3P1Q2M238 152 aa14.91□□□□□ -0.02
CRLF3-201ENST00000324238 LOC107984156A0A0G2JMH3 177 aa14.9□□□□□ -0.02
CRLF3-201ENST00000324238 TSHBP01222 138 aa14.9□□□□□ -0.02
CRLF3-201ENST00000324238 MORN3Q6PF18 240 aaPredicted RBP14.9□□□□□ -0.02
CRLF3-201ENST00000324238 ARL17AQ8IVW1 177 aa14.9□□□□□ -0.02
CRLF3-201ENST00000324238 WNK1Q9H4A3 2382 aa14.9□□□□□ -0.02
CRLF3-201ENST00000324238 LINC01549A6NIU2 74 aa14.9□□□□□ -0.02
CRLF3-201ENST00000324238 FAM223BA6NKX1 122 aa14.9□□□□□ -0.02
CRLF3-201ENST00000324238 CRYGDP07320 174 aa14.9□□□□□ -0.02
CRLF3-201ENST00000324238 CD7P09564 240 aa14.9□□□□□ -0.02
CRLF3-201ENST00000324238 AZU1P20160 251 aa14.9□□□□□ -0.02
CRLF3-201ENST00000324238 FAM223AQ8IWN6 122 aa14.9□□□□□ -0.02
CRLF3-201ENST00000324238 MRPL16Q9NX20 251 aaKnown RBP14.9□□□□□ -0.02
CRLF3-201ENST00000324238 OVOL1O14753 267 aa14.89□□□□□ -0.03
CRLF3-201ENST00000324238 C19orf54Q5BKX5 351 aa14.89□□□□□ -0.03
CRLF3-201ENST00000324238 ZFP2Q6ZN57 461 aa14.89□□□□□ -0.03
CRLF3-201ENST00000324238 SPAG8Q99932 426 aaPredicted RBP14.89□□□□□ -0.03
CRLF3-201ENST00000324238 EPG5Q9HCE0 2579 aa14.89□□□□□ -0.03
CRLF3-201ENST00000324238 HIST2H2BDQ6DRA6 164 aa14.89□□□□□ -0.03
CRLF3-201ENST00000324238 TRAV12-1A0A0B4J245 112 aa14.88□□□□□ -0.03
CRLF3-201ENST00000324238 NDUFA4O00483 81 aa14.88□□□□□ -0.03
CRLF3-201ENST00000324238 HOXA3O43365 443 aaPredicted RBP14.88□□□□□ -0.03
CRLF3-201ENST00000324238 NF1P21359 2839 aa14.88□□□□□ -0.03
CRLF3-201ENST00000324238 IGHV3-64A0A075B6Q5 118 aa14.88□□□□□ -0.03
CRLF3-201ENST00000324238 ZNF688P0C7X2 276 aa14.88□□□□□ -0.03
CRLF3-201ENST00000324238 KLK9Q2XQG4 91 aa14.88□□□□□ -0.03
CRLF3-201ENST00000324238 GAGE13Q4V321 117 aa14.88□□□□□ -0.03
CRLF3-201ENST00000324238 PIMREGQ9BSJ6 248 aa14.88□□□□□ -0.03
CRLF3-201ENST00000324238 KLK9Q9UKQ9 250 aa14.88□□□□□ -0.03
CRLF3-201ENST00000324238 DUX5Q96PT3 197 aa14.88□□□□□ -0.03
CRLF3-201ENST00000324238 SUMO4Q6EEV6 95 aa14.87□□□□□ -0.03
CRLF3-201ENST00000324238 C20orf78Q9BR46 151 aa14.87□□□□□ -0.03
CRLF3-201ENST00000324238 C2CD3Q4AC94 2353 aa14.87□□□□□ -0.03
CRLF3-201ENST00000324238 A0A1B0GWB2 263 aa14.87□□□□□ -0.03
CRLF3-201ENST00000324238 TMEM170BQ5T4T1 132 aa14.87□□□□□ -0.03
CRLF3-201ENST00000324238 PTH2Q96A98 100 aa14.87□□□□□ -0.03
CRLF3-201ENST00000324238 HTN1P15515 57 aa14.86□□□□□ -0.03
CRLF3-201ENST00000324238 LINC00315P59091 139 aa14.86□□□□□ -0.03
CRLF3-201ENST00000324238 PSMG4Q5JS54 123 aa14.86□□□□□ -0.03
CRLF3-201ENST00000324238 CLEC2AQ6UVW9 174 aa14.86□□□□□ -0.03
CRLF3-201ENST00000324238 FAM159AQ6UWV7 190 aa14.86□□□□□ -0.03
CRLF3-201ENST00000324238 ZNF418Q8TF45 676 aaPredicted RBP14.86□□□□□ -0.03
CRLF3-201ENST00000324238 MDFICQ9P1T7 246 aa14.86□□□□□ -0.03
CRLF3-201ENST00000324238 SAMD13Q5VXD3 122 aa14.86□□□□□ -0.03
CRLF3-201ENST00000324238 TSPEAR-AS2P59090 65 aa14.85□□□□□ -0.03
CRLF3-201ENST00000324238 PSMB2P49721 201 aa14.85□□□□□ -0.03
CRLF3-201ENST00000324238 NACAE9PAV3 2078 aa14.84□□□□□ -0.03
CRLF3-201ENST00000324238 LENEPQ9Y5L5 61 aa14.84□□□□□ -0.03
CRLF3-201ENST00000324238 GAGE12HA6NDE8 117 aa14.84□□□□□ -0.03
CRLF3-201ENST00000324238 PRM2P04554 102 aa14.84□□□□□ -0.03
CRLF3-201ENST00000324238 IGLV4-69A0A075B6H9 119 aa14.83□□□□□ -0.03
CRLF3-201ENST00000324238 F8W1H4 67 aa14.83□□□□□ -0.03
CRLF3-201ENST00000324238 TAL2Q16559 108 aa14.83□□□□□ -0.03
CRLF3-201ENST00000324238 KIF25-AS1Q9Y6Z4 181 aa14.83□□□□□ -0.03
CRLF3-201ENST00000324238 SDHAF1A6NFY7 115 aa14.83□□□□□ -0.04
CRLF3-201ENST00000324238 C10orf105Q8TEF2 133 aa14.83□□□□□ -0.04
CRLF3-201ENST00000324238 PRORYQ9H606 182 aa14.83□□□□□ -0.04
CRLF3-201ENST00000324238 PRO0461Q9UI25 63 aa14.82□□□□□ -0.04
CRLF3-201ENST00000324238 NIPBLQ6KC79 2804 aaeCLIP14.82□□□□□ -0.04
CRLF3-201ENST00000324238 IGHV4-59P01825 116 aa14.82□□□□□ -0.04
CRLF3-201ENST00000324238 FAM19A4Q96LR4 140 aa14.82□□□□□ -0.04
CRLF3-201ENST00000324238 ZNRF2Q8NHG8 242 aa14.82□□□□□ -0.04
CRLF3-201ENST00000324238 DAZ1Q9NQZ3 744 aaKnown RBP14.82□□□□□ -0.04
CRLF3-201ENST00000324238 IGHV3-73A0A0B4J1V6 119 aa14.81□□□□□ -0.04
CRLF3-201ENST00000324238 IGHG2P01859 326 aa14.81□□□□□ -0.04
CRLF3-201ENST00000324238 PRB1P04280 392 aa14.81□□□□□ -0.04
CRLF3-201ENST00000324238 COX6B1P14854 86 aa14.81□□□□□ -0.04
CRLF3-201ENST00000324238 ZNF56Q15929 161 aa14.8□□□□□ -0.04
CRLF3-201ENST00000324238 SPINK13Q1W4C9 94 aa14.8□□□□□ -0.04
CRLF3-201ENST00000324238 SIGMAR1Q99720 223 aa14.8□□□□□ -0.04
CRLF3-201ENST00000324238 H7C2G1 150 aa14.8□□□□□ -0.04
CRLF3-201ENST00000324238 MSMBP08118 114 aa14.8□□□□□ -0.04
CRLF3-201ENST00000324238 IGIPA6NJ69 53 aa14.79□□□□□ -0.04
CRLF3-201ENST00000324238 TSPAN13O95857 204 aa14.79□□□□□ -0.04
CRLF3-201ENST00000324238 SMCPP49901 116 aaPredicted RBP14.79□□□□□ -0.04
CRLF3-201ENST00000324238 ZNF580Q9UK33 172 aa14.79□□□□□ -0.04
CRLF3-201ENST00000324238 CHD6Q8TD26 2715 aa14.78□□□□□ -0.04
CRLF3-201ENST00000324238 POLR2KP53803 58 aaKnown RBP14.78□□□□□ -0.04
CRLF3-201ENST00000324238 USMG5Q96IX5 58 aa14.78□□□□□ -0.04
CRLF3-201ENST00000324238 KIR2DL4Q99706 377 aa14.78□□□□□ -0.04
CRLF3-201ENST00000324238 A6NDX4 124 aa14.77□□□□□ -0.04
CRLF3-201ENST00000324238 DCANP1Q8TF63 244 aa14.77□□□□□ -0.04
CRLF3-201ENST00000324238 A0A0J9YY99 117 aa14.77□□□□□ -0.05
CRLF3-201ENST00000324238 PMVKQ15126 192 aa14.77□□□□□ -0.05
CRLF3-201ENST00000324238 Q8N1Y9 231 aa14.77□□□□□ -0.05
CRLF3-201ENST00000324238 ADARB2-AS1A8MUL3 147 aa14.76□□□□□ -0.05
CRLF3-201ENST00000324238 KLLNB2CW77 178 aa14.76□□□□□ -0.05
CRLF3-201ENST00000324238 DEFB112Q30KQ8 113 aa14.76□□□□□ -0.05
CRLF3-201ENST00000324238 RNASE13Q5GAN3 156 aaKnown RBP14.76□□□□□ -0.05
CRLF3-201ENST00000324238 NFE4Q86UQ8 179 aa14.76□□□□□ -0.05
CRLF3-201ENST00000324238 RAX2Q96IS3 184 aa14.76□□□□□ -0.05
CRLF3-201ENST00000324238 P0DMU3 169 aa14.75□□□□□ -0.05
CRLF3-201ENST00000324238 FAM231AP0DMU4 169 aa14.75□□□□□ -0.05
CRLF3-201ENST00000324238 FAM231CP0DMU5 169 aa14.75□□□□□ -0.05
CRLF3-201ENST00000324238 USP24Q9UPU5 2620 aa14.75□□□□□ -0.05
CRLF3-201ENST00000324238 VCYO14598 125 aa14.75□□□□□ -0.05
CRLF3-201ENST00000324238 NDUFS8O00217 210 aa14.74□□□□□ -0.05
CRLF3-201ENST00000324238 PROK1P58294 105 aa14.74□□□□□ -0.05
CRLF3-201ENST00000324238 CRIP2P52943 208 aaPredicted RBP14.74□□□□□ -0.05
CRLF3-201ENST00000324238 Q9UF83 564 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms