RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 FABP5P3A8MUU1 101 aa9.57□□□□□ -0.88
RPP40-201ENST00000319533 TAGLN2P37802 199 aaKnown RBP9.57□□□□□ -0.88
RPP40-201ENST00000319533 AKR1C3P42330 323 aa9.57□□□□□ -0.88
RPP40-201ENST00000319533 TIRAPP58753 221 aa9.57□□□□□ -0.88
RPP40-201ENST00000319533 C10orf126Q8N4M7 172 aa9.57□□□□□ -0.88
RPP40-201ENST00000319533 OR4C5Q8NGB2 326 aa9.57□□□□□ -0.88
RPP40-201ENST00000319533 C11orf52Q96A22 123 aa9.57□□□□□ -0.88
RPP40-201ENST00000319533 TXNDC17Q9BRA2 123 aa9.57□□□□□ -0.88
RPP40-201ENST00000319533 DERL1Q9BUN8 251 aa9.57□□□□□ -0.88
RPP40-201ENST00000319533 C11orf21Q9P2W6 132 aa9.57□□□□□ -0.88
RPP40-201ENST00000319533 LRCOL1A6NCL2 159 aa9.56□□□□□ -0.88
RPP40-201ENST00000319533 CRYGDP07320 174 aa9.56□□□□□ -0.88
RPP40-201ENST00000319533 ZNF876PQ49A33 203 aa9.56□□□□□ -0.88
RPP40-201ENST00000319533 TMEM70Q9BUB7 260 aa9.56□□□□□ -0.88
RPP40-201ENST00000319533 TRBV6-1A0A0K0K1D8 114 aa9.55□□□□□ -0.88
RPP40-201ENST00000319533 C9JCJ5 164 aa9.55□□□□□ -0.88
RPP40-201ENST00000319533 NDUFS6O75380 124 aaKnown RBP9.55□□□□□ -0.88
RPP40-201ENST00000319533 SMR3BP02814 79 aaPredicted RBP9.55□□□□□ -0.88
RPP40-201ENST00000319533 S100A4P26447 101 aaKnown RBP9.55□□□□□ -0.88
RPP40-201ENST00000319533 CEBPGP53567 150 aa9.55□□□□□ -0.88
RPP40-201ENST00000319533 FAM162BQ5T6X4 162 aa9.55□□□□□ -0.88
RPP40-201ENST00000319533 SH2D6Q7Z4S9 175 aa9.55□□□□□ -0.88
RPP40-201ENST00000319533 NTN5Q8WTR8 489 aaPredicted RBP9.55□□□□□ -0.88
RPP40-201ENST00000319533 SMDT1Q9H4I9 107 aa9.55□□□□□ -0.88
RPP40-201ENST00000319533 TMEM250H0YL14 139 aa9.54□□□□□ -0.88
RPP40-201ENST00000319533 FAM229AH3BQW9 127 aa9.54□□□□□ -0.88
RPP40-201ENST00000319533 PDE6DO43924 150 aa9.54□□□□□ -0.88
RPP40-201ENST00000319533 LTAP01374 205 aa9.54□□□□□ -0.88
RPP40-201ENST00000319533 S100A9P06702 114 aaKnown RBP9.54□□□□□ -0.88
RPP40-201ENST00000319533 C10orf91Q5T1B1 145 aa9.54□□□□□ -0.88
RPP40-201ENST00000319533 ZC2HC1AQ96GY0 325 aa9.54□□□□□ -0.88
RPP40-201ENST00000319533 PARLQ9H300 379 aa9.54□□□□□ -0.88
RPP40-201ENST00000319533 TRBV20OR9-2A0A075B6H5 130 aa9.53□□□□□ -0.88
RPP40-201ENST00000319533 B4DEV8 164 aa9.53□□□□□ -0.88
RPP40-201ENST00000319533 ASIPP42127 132 aa9.53□□□□□ -0.88
RPP40-201ENST00000319533 LINC01556Q5JQF7 62 aa9.53□□□□□ -0.88
RPP40-201ENST00000319533 COX8CQ7Z4L0 72 aa9.53□□□□□ -0.88
RPP40-201ENST00000319533 C9orf85Q96MD7 179 aa9.53□□□□□ -0.88
RPP40-201ENST00000319533 IGLV5-52A0A0A0MRZ9 124 aa9.52□□□□□ -0.89
RPP40-201ENST00000319533 IGKV3D-20A0A0C4DH25 116 aa9.52□□□□□ -0.89
RPP40-201ENST00000319533 IGHV3-38A0A0C4DH36 116 aa9.52□□□□□ -0.89
RPP40-201ENST00000319533 LOC100131303A0A0U1RQF7 123 aa9.52□□□□□ -0.89
RPP40-201ENST00000319533 IBA57-AS1B1ANH7 110 aa9.52□□□□□ -0.89
RPP40-201ENST00000319533 F8W036 122 aa9.52□□□□□ -0.89
RPP40-201ENST00000319533 CIDEAO60543 219 aa9.52□□□□□ -0.89
RPP40-201ENST00000319533 SH2D1AO60880 128 aa9.52□□□□□ -0.89
RPP40-201ENST00000319533 RNASE3P12724 160 aaKnown RBP9.52□□□□□ -0.89
RPP40-201ENST00000319533 GATA1P15976 413 aaPredicted RBP9.52□□□□□ -0.89
RPP40-201ENST00000319533 ZNF674Q2M3X9 581 aa9.52□□□□□ -0.89
RPP40-201ENST00000319533 PTH2Q96A98 100 aa9.52□□□□□ -0.89
RPP40-201ENST00000319533 CARHSP1Q9Y2V2 147 aaKnown RBP9.52□□□□□ -0.89
RPP40-201ENST00000319533 M0R036 132 aa9.51□□□□□ -0.89
RPP40-201ENST00000319533 RPL35P42766 123 aaKnown RBP9.51□□□□□ -0.89
RPP40-201ENST00000319533 Q6ZSN1 163 aa9.51□□□□□ -0.89
RPP40-201ENST00000319533 SMIM7Q9BQ49 75 aa9.51□□□□□ -0.89
RPP40-201ENST00000319533 SEC11CQ9BY50 192 aa9.51□□□□□ -0.89
RPP40-201ENST00000319533 IL36BQ9NZH7 164 aa9.51□□□□□ -0.89
RPP40-201ENST00000319533 PGPEP1LA6NFU8 196 aa9.5□□□□□ -0.89
RPP40-201ENST00000319533 KRBOX1C9JBD0 128 aa9.5□□□□□ -0.89
RPP40-201ENST00000319533 RS1O15537 224 aa9.5□□□□□ -0.89
RPP40-201ENST00000319533 CRIP1P50238 77 aa9.5□□□□□ -0.89
RPP40-201ENST00000319533 CFAP126Q5VTH2 177 aa9.5□□□□□ -0.89
RPP40-201ENST00000319533 BAGE2Q86Y30 109 aa9.5□□□□□ -0.89
RPP40-201ENST00000319533 Q8N814 137 aa9.5□□□□□ -0.89
RPP40-201ENST00000319533 NHLRC2Q8NBF2 726 aa9.5□□□□□ -0.89
RPP40-201ENST00000319533 ZNF727A8MUV8 499 aa9.49□□□□□ -0.89
RPP40-201ENST00000319533 A8MWV9 139 aa9.49□□□□□ -0.89
RPP40-201ENST00000319533 H3BVH4 76 aa9.49□□□□□ -0.89
RPP40-201ENST00000319533 PSCAO43653 123 aa9.49□□□□□ -0.89
RPP40-201ENST00000319533 HAMPP81172 84 aa9.49□□□□□ -0.89
RPP40-201ENST00000319533 CENPWQ5EE01 88 aa9.49□□□□□ -0.89
RPP40-201ENST00000319533 PIK3CD-AS1Q5SR53 167 aa9.49□□□□□ -0.89
RPP40-201ENST00000319533 SYT8Q8NBV8 401 aa9.49□□□□□ -0.89
RPP40-201ENST00000319533 TMSB15BA0A087X1C1 80 aa9.48□□□□□ -0.89
RPP40-201ENST00000319533 IGHV3-73A0A0B4J1V6 119 aa9.48□□□□□ -0.89
RPP40-201ENST00000319533 IGLV2-8P01709 118 aa9.48□□□□□ -0.89
RPP40-201ENST00000319533 RHOHQ15669 191 aa9.48□□□□□ -0.89
RPP40-201ENST00000319533 DNLZQ5SXM8 178 aa9.48□□□□□ -0.89
RPP40-201ENST00000319533 PRADC1Q9BSG0 188 aa9.48□□□□□ -0.89
RPP40-201ENST00000319533 FAM30AQ9NZY2 134 aa9.48□□□□□ -0.89
RPP40-201ENST00000319533 PHLDA3Q9Y5J5 127 aa9.48□□□□□ -0.89
RPP40-201ENST00000319533 TRAV8-6A0A0B4J262 113 aa9.47□□□□□ -0.89
RPP40-201ENST00000319533 TRBV6-4A0A1B0GX49 114 aa9.47□□□□□ -0.89
RPP40-201ENST00000319533 GRIFINA4D1Z8 144 aa9.47□□□□□ -0.89
RPP40-201ENST00000319533 APOC3P02656 99 aa9.47□□□□□ -0.89
RPP40-201ENST00000319533 ARMS2P0C7Q2 107 aa9.47□□□□□ -0.89
RPP40-201ENST00000319533 MGST1P10620 155 aaKnown RBP9.47□□□□□ -0.89
RPP40-201ENST00000319533 S100A1P23297 94 aa9.47□□□□□ -0.89
RPP40-201ENST00000319533 ATRAIDQ6UW56 229 aa9.47□□□□□ -0.89
RPP40-201ENST00000319533 SLC25A29Q8N8R3 303 aa9.47□□□□□ -0.89
RPP40-201ENST00000319533 K7EN84 100 aa9.46□□□□□ -0.9
RPP40-201ENST00000319533 RPL23P62829 140 aaKnown RBP9.46□□□□□ -0.9
RPP40-201ENST00000319533 LAGE3Q14657 143 aa9.46□□□□□ -0.9
RPP40-201ENST00000319533 FAM74A3Q4VXF1 159 aa9.46□□□□□ -0.9
RPP40-201ENST00000319533 LELP1Q5T871 98 aa9.46□□□□□ -0.9
RPP40-201ENST00000319533 ZFP2Q6ZN57 461 aa9.46□□□□□ -0.9
RPP40-201ENST00000319533 MLST8Q9BVC4 326 aa9.46□□□□□ -0.9
RPP40-201ENST00000319533 NAT8Q9UHE5 227 aa9.46□□□□□ -0.9
RPP40-201ENST00000319533 GNG4P50150 75 aa9.45□□□□□ -0.9
RPP40-201ENST00000319533 PRR27Q6MZM9 219 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms