RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 KIR3DS1Q14943 382 aa10.58□□□□□ -0.72
VRK3-201ENST00000316763 C4orf3Q8WVX3 66 aa10.58□□□□□ -0.72
VRK3-201ENST00000316763 A6NDN8 102 aa10.58□□□□□ -0.72
VRK3-201ENST00000316763 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.58□□□□□ -0.72
VRK3-201ENST00000316763 RNASE3P12724 160 aaKnown RBP10.58□□□□□ -0.72
VRK3-201ENST00000316763 RASL10AQ92737 203 aa10.58□□□□□ -0.72
VRK3-201ENST00000316763 ODF3Q96PU9 254 aa10.58□□□□□ -0.72
VRK3-201ENST00000316763 ATRQ13535 2644 aa10.57□□□□□ -0.72
VRK3-201ENST00000316763 IGHV4OR15-8A0A075B7B6 117 aa10.57□□□□□ -0.72
VRK3-201ENST00000316763 A0A087WW49 117 aa10.57□□□□□ -0.72
VRK3-201ENST00000316763 C7orf71A4D174 169 aa10.57□□□□□ -0.72
VRK3-201ENST00000316763 CBY3A6NI87 242 aa10.57□□□□□ -0.72
VRK3-201ENST00000316763 NXPH4O95158 308 aa10.57□□□□□ -0.72
VRK3-201ENST00000316763 TCTAP57738 103 aa10.57□□□□□ -0.72
VRK3-201ENST00000316763 C18orf65Q6ZTR6 163 aa10.57□□□□□ -0.72
VRK3-201ENST00000316763 HHLA3Q9XRX5 114 aa10.57□□□□□ -0.72
VRK3-201ENST00000316763 SELENOKQ9Y6D0 94 aa10.57□□□□□ -0.72
VRK3-201ENST00000316763 A0A087WX48 190 aa10.56□□□□□ -0.72
VRK3-201ENST00000316763 EDN2P20800 178 aa10.56□□□□□ -0.72
VRK3-201ENST00000316763 PCP2Q8IVA1 136 aa10.56□□□□□ -0.72
VRK3-201ENST00000316763 LGALS9O00182 355 aa10.56□□□□□ -0.72
VRK3-201ENST00000316763 SPRY2O43597 315 aa10.56□□□□□ -0.72
VRK3-201ENST00000316763 PROK1P58294 105 aa10.56□□□□□ -0.72
VRK3-201ENST00000316763 OR4C5Q8NGB2 326 aa10.56□□□□□ -0.72
VRK3-201ENST00000316763 FBN1P35555 2871 aaKnown RBP10.55□□□□□ -0.72
VRK3-201ENST00000316763 TRAV12-1A0A0B4J245 112 aa10.55□□□□□ -0.72
VRK3-201ENST00000316763 HLA-DRB4P13762 266 aa10.55□□□□□ -0.72
VRK3-201ENST00000316763 PLNP26678 52 aa10.55□□□□□ -0.72
VRK3-201ENST00000316763 HOXD3P31249 432 aaPredicted RBP10.55□□□□□ -0.72
VRK3-201ENST00000316763 POM121L12Q8N7R1 296 aa10.55□□□□□ -0.72
VRK3-201ENST00000316763 TOMM6Q96B49 74 aa10.55□□□□□ -0.72
VRK3-201ENST00000316763 SCGB3A1Q96QR1 104 aa10.55□□□□□ -0.72
VRK3-201ENST00000316763 HLA-DRB4X5D2U9 266 aa10.55□□□□□ -0.72
VRK3-201ENST00000316763 K7EQG2 157 aa10.54□□□□□ -0.72
VRK3-201ENST00000316763 ZNF688P0C7X2 276 aa10.54□□□□□ -0.72
VRK3-201ENST00000316763 ZC2HC1BQ5TFG8 222 aa10.54□□□□□ -0.72
VRK3-201ENST00000316763 ADAMTSL5Q6ZMM2 481 aa10.54□□□□□ -0.72
VRK3-201ENST00000316763 RPL39LQ96EH5 51 aaKnown RBP10.54□□□□□ -0.72
VRK3-201ENST00000316763 MRPL35Q9NZE8 188 aaKnown RBP10.54□□□□□ -0.72
VRK3-201ENST00000316763 HIGD1BQ9P298 99 aa10.54□□□□□ -0.72
VRK3-201ENST00000316763 TRAV12-3A0A0B4J271 114 aa10.54□□□□□ -0.72
VRK3-201ENST00000316763 A0A0J9YX75 114 aa10.54□□□□□ -0.72
VRK3-201ENST00000316763 H7C1H1 209 aa10.54□□□□□ -0.72
VRK3-201ENST00000316763 DUSP14O95147 198 aaKnown RBP10.54□□□□□ -0.72
VRK3-201ENST00000316763 CD7P09564 240 aa10.54□□□□□ -0.72
VRK3-201ENST00000316763 CD28P10747 220 aa10.54□□□□□ -0.72
VRK3-201ENST00000316763 SYNJ2BPP57105 145 aa10.54□□□□□ -0.72
VRK3-201ENST00000316763 LINC01619G3V211 115 aa10.53□□□□□ -0.72
VRK3-201ENST00000316763 H3BRM9 83 aa10.53□□□□□ -0.72
VRK3-201ENST00000316763 DEFB136Q30KP8 78 aa10.53□□□□□ -0.72
VRK3-201ENST00000316763 GTSCR1Q86UQ5 136 aa10.53□□□□□ -0.72
VRK3-201ENST00000316763 KLHL30-AS1Q8NEE0 82 aa10.53□□□□□ -0.72
VRK3-201ENST00000316763 RPL32P62910 135 aaKnown RBP10.52□□□□□ -0.72
VRK3-201ENST00000316763 KHDC1LQ5JSQ8 128 aa10.52□□□□□ -0.72
VRK3-201ENST00000316763 OR11H1Q8NG94 326 aa10.52□□□□□ -0.72
VRK3-201ENST00000316763 MUC4Q99102 2169 aa10.52□□□□□ -0.73
VRK3-201ENST00000316763 IGKV2D-26A0A0A0MRZ7 120 aa10.52□□□□□ -0.73
VRK3-201ENST00000316763 LINC01549A6NIU2 74 aa10.52□□□□□ -0.73
VRK3-201ENST00000316763 KRTAP10-3P60369 221 aa10.52□□□□□ -0.73
VRK3-201ENST00000316763 HIST2H2BDQ6DRA6 164 aa10.52□□□□□ -0.73
VRK3-201ENST00000316763 C11orf44Q8N8P7 122 aa10.52□□□□□ -0.73
VRK3-201ENST00000316763 SYT8Q8NBV8 401 aa10.52□□□□□ -0.73
VRK3-201ENST00000316763 CSTL1Q9H114 145 aa10.52□□□□□ -0.73
VRK3-201ENST00000316763 KIF25-AS1Q9Y6Z4 181 aa10.52□□□□□ -0.73
VRK3-201ENST00000316763 F8VRH5 84 aa10.51□□□□□ -0.73
VRK3-201ENST00000316763 AMMECR1LQ6DCA0 310 aa10.51□□□□□ -0.73
VRK3-201ENST00000316763 ERASQ7Z444 233 aa10.51□□□□□ -0.73
VRK3-201ENST00000316763 CITED2Q99967 270 aaPredicted RBP10.51□□□□□ -0.73
VRK3-201ENST00000316763 TSSC4Q9Y5U2 329 aaPredicted RBP10.51□□□□□ -0.73
VRK3-201ENST00000316763 CDKN1BP46527 198 aa10.5□□□□□ -0.73
VRK3-201ENST00000316763 SLURP1P55000 103 aa10.5□□□□□ -0.73
VRK3-201ENST00000316763 C2orf66Q6UXQ4 117 aa10.5□□□□□ -0.73
VRK3-201ENST00000316763 CHTOPQ9Y3Y2 248 aaKnown RBP10.5□□□□□ -0.73
VRK3-201ENST00000316763 LINC00315P59091 139 aa10.5□□□□□ -0.73
VRK3-201ENST00000316763 FHL3Q13643 280 aa10.5□□□□□ -0.73
VRK3-201ENST00000316763 IGHV3-16A0A0C4DH30 117 aa10.49□□□□□ -0.73
VRK3-201ENST00000316763 C9orf118A6NHY6 69 aa10.49□□□□□ -0.73
VRK3-201ENST00000316763 F5H697 171 aa10.49□□□□□ -0.73
VRK3-201ENST00000316763 IGKV3-20P01619 116 aa10.49□□□□□ -0.73
VRK3-201ENST00000316763 RIPPLY3P57055 190 aa10.49□□□□□ -0.73
VRK3-201ENST00000316763 FOXI2Q6ZQN5 318 aa10.49□□□□□ -0.73
VRK3-201ENST00000316763 NEXN-AS1Q8NBZ9 246 aa10.49□□□□□ -0.73
VRK3-201ENST00000316763 RAX2Q96IS3 184 aa10.49□□□□□ -0.73
VRK3-201ENST00000316763 C9orf85Q96MD7 179 aa10.49□□□□□ -0.73
VRK3-201ENST00000316763 CHAC1Q9BUX1 264 aa10.49□□□□□ -0.73
VRK3-201ENST00000316763 IGHV1OR15-1A0A075B7D0 117 aa10.48□□□□□ -0.73
VRK3-201ENST00000316763 TRAV8-6A0A0B4J262 113 aa10.48□□□□□ -0.73
VRK3-201ENST00000316763 VCYO14598 125 aa10.48□□□□□ -0.73
VRK3-201ENST00000316763 SUMO4Q6EEV6 95 aa10.48□□□□□ -0.73
VRK3-201ENST00000316763 DUX3Q96PT4 197 aa10.48□□□□□ -0.73
VRK3-201ENST00000316763 TRBV25-1A0A075B6N4 114 aa10.48□□□□□ -0.73
VRK3-201ENST00000316763 K7EP13 123 aa10.48□□□□□ -0.73
VRK3-201ENST00000316763 DLX4Q92988 240 aaPredicted RBP10.48□□□□□ -0.73
VRK3-201ENST00000316763 KIR2DL4Q99706 377 aa10.48□□□□□ -0.73
VRK3-201ENST00000316763 CYSLTR1Q9Y271 337 aa10.48□□□□□ -0.73
VRK3-201ENST00000316763 TENM1Q9UKZ4 2725 aa10.48□□□□□ -0.73
VRK3-201ENST00000316763 TRAV12-2A0A075B6T6 113 aa10.47□□□□□ -0.73
VRK3-201ENST00000316763 ADARB2-AS1A8MUL3 147 aa10.47□□□□□ -0.73
VRK3-201ENST00000316763 GTF2H5Q6ZYL4 71 aa10.47□□□□□ -0.73
VRK3-201ENST00000316763 A0A087WWL8 130 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms