RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 CSMD1Q96PZ7 3565 aa11.13□□□□□ -0.63
CHFR-202ENST00000315585 ZNF688P0C7X2 276 aa11.13□□□□□ -0.63
CHFR-202ENST00000315585 F5H697 171 aa11.13□□□□□ -0.63
CHFR-202ENST00000315585 K7EP34 96 aa11.13□□□□□ -0.63
CHFR-202ENST00000315585 K7ERU9 68 aa11.13□□□□□ -0.63
CHFR-202ENST00000315585 TRBV6-5A0A0K0K1A5 114 aa11.12□□□□□ -0.63
CHFR-202ENST00000315585 A0A1W2PPM0 123 aa11.12□□□□□ -0.63
CHFR-202ENST00000315585 FOXI2Q6ZQN5 318 aa11.12□□□□□ -0.63
CHFR-202ENST00000315585 BAALCQ8WXS3 180 aa11.12□□□□□ -0.63
CHFR-202ENST00000315585 C9orf85Q96MD7 179 aa11.12□□□□□ -0.63
CHFR-202ENST00000315585 POLR2KP53803 58 aaKnown RBP11.11□□□□□ -0.63
CHFR-202ENST00000315585 LINC00315P59091 139 aa11.11□□□□□ -0.63
CHFR-202ENST00000315585 RNASE8Q8TDE3 154 aaKnown RBP11.11□□□□□ -0.63
CHFR-202ENST00000315585 TRGV11A0A075B6L2 103 aa11.11□□□□□ -0.63
CHFR-202ENST00000315585 IGHV1OR15-1A0A075B7D0 117 aa11.11□□□□□ -0.63
CHFR-202ENST00000315585 MYMXA0A1B0GTQ4 84 aa11.11□□□□□ -0.63
CHFR-202ENST00000315585 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
CHFR-202ENST00000315585 HERVK_113P61574 105 aa11.11□□□□□ -0.63
CHFR-202ENST00000315585 SAMD5Q5TGI4 173 aa11.11□□□□□ -0.63
CHFR-202ENST00000315585 UFSP1Q6NVU6 142 aa11.11□□□□□ -0.63
CHFR-202ENST00000315585 RAB37Q96AX2 223 aa11.11□□□□□ -0.63
CHFR-202ENST00000315585 YAE1D1Q9NRH1 226 aa11.11□□□□□ -0.63
CHFR-202ENST00000315585 CHD6Q8TD26 2715 aa11.1□□□□□ -0.63
CHFR-202ENST00000315585 IGHV3-16A0A0C4DH30 117 aa11.1□□□□□ -0.63
CHFR-202ENST00000315585 E9PLD3 99 aa11.1□□□□□ -0.63
CHFR-202ENST00000315585 SUMO4Q6EEV6 95 aa11.1□□□□□ -0.63
CHFR-202ENST00000315585 TIMM17AQ99595 171 aa11.1□□□□□ -0.63
CHFR-202ENST00000315585 ABCA12Q86UK0 2595 aa11.1□□□□□ -0.63
CHFR-202ENST00000315585 CELSR2Q9HCU4 2923 aa11.1□□□□□ -0.63
CHFR-202ENST00000315585 PRSS29PA6NIE9 313 aa11.1□□□□□ -0.63
CHFR-202ENST00000315585 OCIAD2Q56VL3 154 aa11.1□□□□□ -0.63
CHFR-202ENST00000315585 C10orf99Q6UWK7 81 aa11.1□□□□□ -0.63
CHFR-202ENST00000315585 HIST1H4GQ99525 98 aa11.1□□□□□ -0.63
CHFR-202ENST00000315585 TRBV27A0A0K0K1C4 114 aa11.09□□□□□ -0.63
CHFR-202ENST00000315585 SPRY2O43597 315 aa11.09□□□□□ -0.63
CHFR-202ENST00000315585 ZFP2Q6ZN57 461 aa11.09□□□□□ -0.63
CHFR-202ENST00000315585 SPCS1Q9Y6A9 102 aa11.09□□□□□ -0.63
CHFR-202ENST00000315585 CREBBPQ92793 2442 aa11.09□□□□□ -0.63
CHFR-202ENST00000315585 HOXD3P31249 432 aaPredicted RBP11.09□□□□□ -0.63
CHFR-202ENST00000315585 FXYD2P54710 66 aa11.09□□□□□ -0.63
CHFR-202ENST00000315585 PMVKQ15126 192 aa11.09□□□□□ -0.63
CHFR-202ENST00000315585 DUX5Q96PT3 197 aa11.09□□□□□ -0.63
CHFR-202ENST00000315585 TRAV2A0A0B4J234 112 aa11.08□□□□□ -0.64
CHFR-202ENST00000315585 SDHAF1A6NFY7 115 aa11.08□□□□□ -0.64
CHFR-202ENST00000315585 RBX1P62877 108 aa11.08□□□□□ -0.64
CHFR-202ENST00000315585 TRPT1Q86TN4 253 aaKnown RBP11.08□□□□□ -0.64
CHFR-202ENST00000315585 RIPPLY3P57055 190 aa11.08□□□□□ -0.64
CHFR-202ENST00000315585 RHOHQ15669 191 aa11.08□□□□□ -0.64
CHFR-202ENST00000315585 TTTY13Q9BZ97 58 aa11.08□□□□□ -0.64
CHFR-202ENST00000315585 PEMTQ9UBM1 199 aa11.08□□□□□ -0.64
CHFR-202ENST00000315585 TP53TG1Q9Y2A0 90 aa11.08□□□□□ -0.64
CHFR-202ENST00000315585 APCP25054 2843 aa11.07□□□□□ -0.64
CHFR-202ENST00000315585 DNAJC9-AS1A6NH13 148 aa11.07□□□□□ -0.64
CHFR-202ENST00000315585 EDN2P20800 178 aa11.07□□□□□ -0.64
CHFR-202ENST00000315585 MAPKAPK5-AS1Q8N8E1 139 aa11.07□□□□□ -0.64
CHFR-202ENST00000315585 CENPEQ02224 2701 aa11.07□□□□□ -0.64
CHFR-202ENST00000315585 A0A087WWL8 130 aa11.07□□□□□ -0.64
CHFR-202ENST00000315585 TMEM238LA0A1B0GVL6 79 aa11.07□□□□□ -0.64
CHFR-202ENST00000315585 A6NJY4 79 aa11.07□□□□□ -0.64
CHFR-202ENST00000315585 KRTAP1-1Q07627 177 aa11.07□□□□□ -0.64
CHFR-202ENST00000315585 Q8N1Y9 231 aa11.07□□□□□ -0.64
CHFR-202ENST00000315585 NHP2Q9NX24 153 aaKnown RBP11.07□□□□□ -0.64
CHFR-202ENST00000315585 VPS13CQ709C8 3753 aa11.06□□□□□ -0.64
CHFR-202ENST00000315585 IGIPA6NJ69 53 aa11.06□□□□□ -0.64
CHFR-202ENST00000315585 ZNF56Q15929 161 aa11.06□□□□□ -0.64
CHFR-202ENST00000315585 JMJD8Q96S16 334 aa11.06□□□□□ -0.64
CHFR-202ENST00000315585 FAM74A4Q5TZK3 123 aa11.06□□□□□ -0.64
CHFR-202ENST00000315585 IGKV3-20P01619 116 aa11.05□□□□□ -0.64
CHFR-202ENST00000315585 SPINK13Q1W4C9 94 aa11.05□□□□□ -0.64
CHFR-202ENST00000315585 TCTEX1D4Q5JR98 221 aa11.05□□□□□ -0.64
CHFR-202ENST00000315585 WFDC12Q8WWY7 111 aa11.05□□□□□ -0.64
CHFR-202ENST00000315585 PRADC1Q9BSG0 188 aa11.05□□□□□ -0.64
CHFR-202ENST00000315585 SELENOKQ9Y6D0 94 aa11.05□□□□□ -0.64
CHFR-202ENST00000315585 TENM4Q6N022 2769 aa11.05□□□□□ -0.64
CHFR-202ENST00000315585 TRAV12-2A0A075B6T6 113 aa11.05□□□□□ -0.64
CHFR-202ENST00000315585 MDFICQ9P1T7 246 aa11.05□□□□□ -0.64
CHFR-202ENST00000315585 MUC4Q99102 2169 aa11.04□□□□□ -0.64
CHFR-202ENST00000315585 M0QY20 66 aa11.04□□□□□ -0.64
CHFR-202ENST00000315585 NSUN5P1Q3KNT7 163 aa11.04□□□□□ -0.64
CHFR-202ENST00000315585 PIK3CD-AS1Q5SR53 167 aa11.04□□□□□ -0.64
CHFR-202ENST00000315585 Q6ZSV7 163 aa11.04□□□□□ -0.64
CHFR-202ENST00000315585 C4orf3Q8WVX3 66 aa11.04□□□□□ -0.64
CHFR-202ENST00000315585 JPT2Q9H910 190 aa11.04□□□□□ -0.64
CHFR-202ENST00000315585 ZNF256Q9Y2P7 627 aaPredicted RBP11.04□□□□□ -0.64
CHFR-202ENST00000315585 CRYGDP07320 174 aa11.04□□□□□ -0.64
CHFR-202ENST00000315585 ZNF876PQ49A33 203 aa11.04□□□□□ -0.64
CHFR-202ENST00000315585 SCGB1D4Q6XE38 83 aa11.04□□□□□ -0.64
CHFR-202ENST00000315585 ZNF815PA8K554 130 aa11.03□□□□□ -0.64
CHFR-202ENST00000315585 C12orf74Q32Q52 190 aa11.03□□□□□ -0.64
CHFR-202ENST00000315585 ZNF418Q8TF45 676 aaPredicted RBP11.03□□□□□ -0.64
CHFR-202ENST00000315585 PHLDA1Q8WV24 401 aaPredicted RBP11.03□□□□□ -0.64
CHFR-202ENST00000315585 SVEP1Q4LDE5 3571 aa11.03□□□□□ -0.64
CHFR-202ENST00000315585 I3L3M4 83 aa11.03□□□□□ -0.64
CHFR-202ENST00000315585 RNF151Q2KHN1 245 aa11.03□□□□□ -0.64
CHFR-202ENST00000315585 VPS25Q9BRG1 176 aa11.03□□□□□ -0.64
CHFR-202ENST00000315585 EDA2RQ9HAV5 297 aa11.03□□□□□ -0.64
CHFR-202ENST00000315585 TRBV7-3A0A075B6L6 115 aa11.02□□□□□ -0.65
CHFR-202ENST00000315585 C11orf86A6NJI1 115 aa11.02□□□□□ -0.65
CHFR-202ENST00000315585 AMTNQ6UX39 209 aa11.02□□□□□ -0.65
CHFR-202ENST00000315585 RNASE1P07998 156 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms