RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 A0A087WWL8 130 aa13.51□□□□□ -0.25
CCDC43-201ENST00000315286 SUMO2P61956 95 aaKnown RBP13.51□□□□□ -0.25
CCDC43-201ENST00000315286 LAGE3Q14657 143 aa13.51□□□□□ -0.25
CCDC43-201ENST00000315286 CBY3A6NI87 242 aa13.5□□□□□ -0.25
CCDC43-201ENST00000315286 ADARB2-AS1A8MUL3 147 aa13.5□□□□□ -0.25
CCDC43-201ENST00000315286 EREGO14944 169 aa13.5□□□□□ -0.25
CCDC43-201ENST00000315286 ODF3L2Q3SX64 289 aa13.5□□□□□ -0.25
CCDC43-201ENST00000315286 C20orf78Q9BR46 151 aa13.5□□□□□ -0.25
CCDC43-201ENST00000315286 SNHG12Q9BXW3 62 aa13.5□□□□□ -0.25
CCDC43-201ENST00000315286 TRGV11A0A075B6L2 103 aa13.49□□□□□ -0.25
CCDC43-201ENST00000315286 HTN1P15515 57 aa13.49□□□□□ -0.25
CCDC43-201ENST00000315286 SYT8Q8NBV8 401 aa13.49□□□□□ -0.25
CCDC43-201ENST00000315286 INAFM1C9JVW0 142 aa13.48□□□□□ -0.25
CCDC43-201ENST00000315286 LGALS9BQ3B8N2 356 aa13.48□□□□□ -0.25
CCDC43-201ENST00000315286 NSUN5P1Q3KNT7 163 aa13.48□□□□□ -0.25
CCDC43-201ENST00000315286 LGALS9CQ6DKI2 356 aa13.48□□□□□ -0.25
CCDC43-201ENST00000315286 PRM2P04554 102 aa13.48□□□□□ -0.25
CCDC43-201ENST00000315286 Q6ZN92 141 aa13.48□□□□□ -0.25
CCDC43-201ENST00000315286 ST20Q9HBF5 79 aa13.48□□□□□ -0.25
CCDC43-201ENST00000315286 NSD1Q96L73 2696 aaPredicted RBP13.47□□□□□ -0.25
CCDC43-201ENST00000315286 HSBP1L1C9JCN9 74 aa13.47□□□□□ -0.25
CCDC43-201ENST00000315286 M0R143 59 aa13.47□□□□□ -0.25
CCDC43-201ENST00000315286 SUMO4Q6EEV6 95 aa13.47□□□□□ -0.25
CCDC43-201ENST00000315286 GOLT1BQ9Y3E0 138 aa13.47□□□□□ -0.25
CCDC43-201ENST00000315286 F5H697 171 aa13.46□□□□□ -0.25
CCDC43-201ENST00000315286 FAM74A4Q5TZK3 123 aa13.46□□□□□ -0.25
CCDC43-201ENST00000315286 SAP30O75446 220 aa13.46□□□□□ -0.26
CCDC43-201ENST00000315286 PPP1R17O96001 155 aa13.46□□□□□ -0.26
CCDC43-201ENST00000315286 KRTAP10-3P60369 221 aa13.46□□□□□ -0.26
CCDC43-201ENST00000315286 ZNF876PQ49A33 203 aa13.46□□□□□ -0.26
CCDC43-201ENST00000315286 HIVEP1P15822 2718 aa13.45□□□□□ -0.26
CCDC43-201ENST00000315286 CRYGDP07320 174 aa13.45□□□□□ -0.26
CCDC43-201ENST00000315286 C2orf88Q9BSF0 95 aa13.45□□□□□ -0.26
CCDC43-201ENST00000315286 NUDT3O95989 172 aa13.44□□□□□ -0.26
CCDC43-201ENST00000315286 LBHQ53QV2 105 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-201ENST00000315286 OR11H12B2RN74 326 aa13.44□□□□□ -0.26
CCDC43-201ENST00000315286 HNRNPA3P51991 378 aaKnown RBP13.44□□□□□ -0.26
CCDC43-201ENST00000315286 CLUHP3Q96NS8 147 aa13.44□□□□□ -0.26
CCDC43-201ENST00000315286 CSTL1Q9H114 145 aa13.44□□□□□ -0.26
CCDC43-201ENST00000315286 DKK2Q9UBU2 259 aa13.44□□□□□ -0.26
CCDC43-201ENST00000315286 FN1P02751 2386 aaKnown RBP13.44□□□□□ -0.26
CCDC43-201ENST00000315286 C2CD3Q4AC94 2353 aa13.43□□□□□ -0.26
CCDC43-201ENST00000315286 TP73-AS1Q9UF72 201 aa13.43□□□□□ -0.26
CCDC43-201ENST00000315286 JMJD1CQ15652 2540 aa13.43□□□□□ -0.26
CCDC43-201ENST00000315286 PRSS1P07477 247 aa13.43□□□□□ -0.26
CCDC43-201ENST00000315286 ORMDL2Q53FV1 153 aa13.43□□□□□ -0.26
CCDC43-201ENST00000315286 NEGR1Q7Z3B1 354 aa13.43□□□□□ -0.26
CCDC43-201ENST00000315286 STHQ8IWL8 128 aa13.43□□□□□ -0.26
CCDC43-201ENST00000315286 LINC01587Q99440 93 aa13.43□□□□□ -0.26
CCDC43-201ENST00000315286 K7EMI3 77 aa13.41□□□□□ -0.26
CCDC43-201ENST00000315286 ATP5LO75964 103 aa13.41□□□□□ -0.26
CCDC43-201ENST00000315286 INSP01308 110 aa13.41□□□□□ -0.26
CCDC43-201ENST00000315286 IGLV1-51P01701 117 aa13.41□□□□□ -0.26
CCDC43-201ENST00000315286 ZNF56Q15929 161 aa13.41□□□□□ -0.26
CCDC43-201ENST00000315286 MRPL52Q86TS9 123 aaKnown RBP13.41□□□□□ -0.26
CCDC43-201ENST00000315286 XCL2Q9UBD3 114 aa13.41□□□□□ -0.26
CCDC43-201ENST00000315286 POLR2KP53803 58 aaKnown RBP13.41□□□□□ -0.26
CCDC43-201ENST00000315286 ODF1Q14990 250 aa13.41□□□□□ -0.26
CCDC43-201ENST00000315286 M0QY20 66 aa13.4□□□□□ -0.26
CCDC43-201ENST00000315286 TRPT1Q86TN4 253 aaKnown RBP13.4□□□□□ -0.26
CCDC43-201ENST00000315286 A0A1B0GV90 55 aa13.4□□□□□ -0.27
CCDC43-201ENST00000315286 RPL32P62910 135 aaKnown RBP13.4□□□□□ -0.27
CCDC43-201ENST00000315286 NDUFA11Q86Y39 141 aa13.4□□□□□ -0.27
CCDC43-201ENST00000315286 STPG4Q8N801 248 aa13.4□□□□□ -0.27
CCDC43-201ENST00000315286 ANKRD39Q53RE8 183 aa13.39□□□□□ -0.27
CCDC43-201ENST00000315286 MORN3Q6PF18 240 aaPredicted RBP13.39□□□□□ -0.27
CCDC43-201ENST00000315286 TOMM6Q96B49 74 aa13.39□□□□□ -0.27
CCDC43-201ENST00000315286 LINC00467Q9BRT7 94 aa13.39□□□□□ -0.27
CCDC43-201ENST00000315286 MRPS16Q9Y3D3 137 aaKnown RBP13.39□□□□□ -0.27
CCDC43-201ENST00000315286 ZNF415Q09FC8 603 aa13.38□□□□□ -0.27
CCDC43-201ENST00000315286 DEFB104AQ8WTQ1 72 aa13.38□□□□□ -0.27
CCDC43-201ENST00000315286 TRBV6-5A0A0K0K1A5 114 aa13.38□□□□□ -0.27
CCDC43-201ENST00000315286 M0R2P5 195 aa13.38□□□□□ -0.27
CCDC43-201ENST00000315286 BATFQ16520 125 aa13.38□□□□□ -0.27
CCDC43-201ENST00000315286 SLC25A34Q6PIV7 304 aa13.38□□□□□ -0.27
CCDC43-201ENST00000315286 C11orf72Q8NBR9 251 aa13.38□□□□□ -0.27
CCDC43-201ENST00000315286 ZMAT4Q9H898 229 aa13.38□□□□□ -0.27
CCDC43-201ENST00000315286 SDHAF1A6NFY7 115 aa13.37□□□□□ -0.27
CCDC43-201ENST00000315286 VCYO14598 125 aa13.37□□□□□ -0.27
CCDC43-201ENST00000315286 NOTCH3Q9UM47 2321 aa13.37□□□□□ -0.27
CCDC43-201ENST00000315286 NACAE9PAV3 2078 aa13.37□□□□□ -0.27
CCDC43-201ENST00000315286 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.36□□□□□ -0.27
CCDC43-201ENST00000315286 C2orf66Q6UXQ4 117 aa13.36□□□□□ -0.27
CCDC43-201ENST00000315286 C1orf158Q8N1D5 194 aa13.36□□□□□ -0.27
CCDC43-201ENST00000315286 SCGB3A1Q96QR1 104 aa13.36□□□□□ -0.27
CCDC43-201ENST00000315286 CMC4P56277 68 aaPredicted RBP13.36□□□□□ -0.27
CCDC43-201ENST00000315286 TCTAP57738 103 aa13.36□□□□□ -0.27
CCDC43-201ENST00000315286 BEAN1Q3B7T3 259 aa13.36□□□□□ -0.27
CCDC43-201ENST00000315286 WFDC10AQ9H1F0 79 aa13.36□□□□□ -0.27
CCDC43-201ENST00000315286 COX8AP10176 69 aa13.35□□□□□ -0.27
CCDC43-201ENST00000315286 FOSL1P15407 271 aa13.35□□□□□ -0.27
CCDC43-201ENST00000315286 AZU1P20160 251 aa13.35□□□□□ -0.27
CCDC43-201ENST00000315286 TMEM208Q9BTX3 173 aa13.35□□□□□ -0.27
CCDC43-201ENST00000315286 C19orf73Q9NVV2 129 aa13.35□□□□□ -0.27
CCDC43-201ENST00000315286 IGHV3-73A0A0B4J1V6 119 aa13.35□□□□□ -0.27
CCDC43-201ENST00000315286 TRBV27A0A0K0K1C4 114 aa13.35□□□□□ -0.27
CCDC43-201ENST00000315286 ZFP2Q6ZN57 461 aa13.35□□□□□ -0.27
CCDC43-201ENST00000315286 HHLA3Q9XRX5 114 aa13.35□□□□□ -0.27
CCDC43-201ENST00000315286 IGHV3OR16-12A0A075B7B8 117 aa13.34□□□□□ -0.27
CCDC43-201ENST00000315286 NUTF2P61970 127 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms