RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 CD7P09564 240 aa11.32□□□□□ -0.6
CSDC2-201ENST00000306149 RPL24P83731 157 aaKnown RBP11.32□□□□□ -0.6
CSDC2-201ENST00000306149 FAM159AQ6UWV7 190 aa11.32□□□□□ -0.6
CSDC2-201ENST00000306149 PTPN13Q12923 2485 aa11.32□□□□□ -0.6
CSDC2-201ENST00000306149 PRSS29PA6NIE9 313 aa11.32□□□□□ -0.6
CSDC2-201ENST00000306149 DUSP14O95147 198 aaKnown RBP11.32□□□□□ -0.6
CSDC2-201ENST00000306149 DCANP1Q8TF63 244 aa11.32□□□□□ -0.6
CSDC2-201ENST00000306149 F5H697 171 aa11.31□□□□□ -0.6
CSDC2-201ENST00000306149 NDUFS8O00217 210 aa11.31□□□□□ -0.6
CSDC2-201ENST00000306149 LINC00315P59091 139 aa11.31□□□□□ -0.6
CSDC2-201ENST00000306149 RRN3P1Q2M238 152 aa11.31□□□□□ -0.6
CSDC2-201ENST00000306149 FBN2P35556 2912 aa11.31□□□□□ -0.6
CSDC2-201ENST00000306149 CFHR3Q02985 330 aa11.31□□□□□ -0.6
CSDC2-201ENST00000306149 TLN2Q9Y4G6 2542 aa11.31□□□□□ -0.6
CSDC2-201ENST00000306149 KLLNB2CW77 178 aa11.3□□□□□ -0.6
CSDC2-201ENST00000306149 LGALS1P09382 135 aaKnown RBP11.3□□□□□ -0.6
CSDC2-201ENST00000306149 DEFB112Q30KQ8 113 aa11.3□□□□□ -0.6
CSDC2-201ENST00000306149 FAM74A4Q5TZK3 123 aa11.3□□□□□ -0.6
CSDC2-201ENST00000306149 DUX5Q96PT3 197 aa11.3□□□□□ -0.6
CSDC2-201ENST00000306149 KIF25-AS1Q9Y6Z4 181 aa11.3□□□□□ -0.6
CSDC2-201ENST00000306149 SAMD13Q5VXD3 122 aa11.3□□□□□ -0.6
CSDC2-201ENST00000306149 SPANXB1Q9NS25 103 aaPredicted RBP11.3□□□□□ -0.6
CSDC2-201ENST00000306149 RPL39P62891 51 aaKnown RBP11.29□□□□□ -0.6
CSDC2-201ENST00000306149 RPL32P62910 135 aaKnown RBP11.29□□□□□ -0.6
CSDC2-201ENST00000306149 PRADC1Q9BSG0 188 aa11.29□□□□□ -0.6
CSDC2-201ENST00000306149 CYSLTR1Q9Y271 337 aa11.29□□□□□ -0.6
CSDC2-201ENST00000306149 B4DSR2 109 aa11.29□□□□□ -0.6
CSDC2-201ENST00000306149 SUMO4Q6EEV6 95 aa11.29□□□□□ -0.6
CSDC2-201ENST00000306149 MDFICQ9P1T7 246 aa11.28□□□□□ -0.6
CSDC2-201ENST00000306149 PSMB8P28062 276 aa11.28□□□□□ -0.6
CSDC2-201ENST00000306149 ID1P41134 155 aa11.28□□□□□ -0.6
CSDC2-201ENST00000306149 TP53TG1Q9Y2A0 90 aa11.28□□□□□ -0.6
CSDC2-201ENST00000306149 TEX15Q9BXT5 2789 aa11.28□□□□□ -0.6
CSDC2-201ENST00000306149 ZNF462Q96JM2 2506 aa11.28□□□□□ -0.6
CSDC2-201ENST00000306149 H3BMG7 143 aa11.28□□□□□ -0.6
CSDC2-201ENST00000306149 WFDC2Q14508 124 aa11.28□□□□□ -0.6
CSDC2-201ENST00000306149 CD300EQ496F6 205 aaPredicted RBP11.28□□□□□ -0.6
CSDC2-201ENST00000306149 KLHL30-AS1Q8NEE0 82 aa11.28□□□□□ -0.6
CSDC2-201ENST00000306149 IGHV4OR15-8A0A075B7B6 117 aa11.27□□□□□ -0.61
CSDC2-201ENST00000306149 A0A087WW49 117 aa11.27□□□□□ -0.61
CSDC2-201ENST00000306149 LINC01549A6NIU2 74 aa11.27□□□□□ -0.61
CSDC2-201ENST00000306149 TSHBP01222 138 aa11.27□□□□□ -0.61
CSDC2-201ENST00000306149 CRYGDP07320 174 aa11.27□□□□□ -0.61
CSDC2-201ENST00000306149 COX6B1P14854 86 aa11.27□□□□□ -0.61
CSDC2-201ENST00000306149 ZNF815PA8K554 130 aa11.26□□□□□ -0.61
CSDC2-201ENST00000306149 K7EMT4 169 aa11.26□□□□□ -0.61
CSDC2-201ENST00000306149 SYNJ2BPP57105 145 aa11.26□□□□□ -0.61
CSDC2-201ENST00000306149 MORN3Q6PF18 240 aaPredicted RBP11.26□□□□□ -0.61
CSDC2-201ENST00000306149 SPINK13Q1W4C9 94 aa11.26□□□□□ -0.61
CSDC2-201ENST00000306149 AMTNQ6UX39 209 aa11.26□□□□□ -0.61
CSDC2-201ENST00000306149 ZFP2Q6ZN57 461 aa11.26□□□□□ -0.61
CSDC2-201ENST00000306149 PRO0461Q9UI25 63 aa11.26□□□□□ -0.61
CSDC2-201ENST00000306149 ZNF256Q9Y2P7 627 aaPredicted RBP11.26□□□□□ -0.61
CSDC2-201ENST00000306149 SCGB2A2Q13296 93 aa11.25□□□□□ -0.61
CSDC2-201ENST00000306149 MTURNQ8N3F0 131 aa11.25□□□□□ -0.61
CSDC2-201ENST00000306149 PLEKHB2Q96CS7 222 aa11.25□□□□□ -0.61
CSDC2-201ENST00000306149 SDHAF1A6NFY7 115 aa11.25□□□□□ -0.61
CSDC2-201ENST00000306149 J3QR89 54 aa11.25□□□□□ -0.61
CSDC2-201ENST00000306149 HOXA3O43365 443 aaPredicted RBP11.25□□□□□ -0.61
CSDC2-201ENST00000306149 POLR2KP53803 58 aaKnown RBP11.25□□□□□ -0.61
CSDC2-201ENST00000306149 GAGE13Q4V321 117 aa11.25□□□□□ -0.61
CSDC2-201ENST00000306149 NAV2Q8IVL1 2488 aa11.25□□□□□ -0.61
CSDC2-201ENST00000306149 IGLV4-69A0A075B6H9 119 aa11.24□□□□□ -0.61
CSDC2-201ENST00000306149 C11orf86A6NJI1 115 aa11.24□□□□□ -0.61
CSDC2-201ENST00000306149 PAPPA-AS1Q5QFB9 102 aa11.24□□□□□ -0.61
CSDC2-201ENST00000306149 Q8N1Y9 231 aa11.24□□□□□ -0.61
CSDC2-201ENST00000306149 GTSF1LQ9H1H1 148 aa11.24□□□□□ -0.61
CSDC2-201ENST00000306149 IGIPA6NJ69 53 aa11.23□□□□□ -0.61
CSDC2-201ENST00000306149 TGFAP01135 160 aa11.23□□□□□ -0.61
CSDC2-201ENST00000306149 SMAGPQ0VAQ4 97 aa11.23□□□□□ -0.61
CSDC2-201ENST00000306149 SCGB1D4Q6XE38 83 aa11.23□□□□□ -0.61
CSDC2-201ENST00000306149 UBE2D1P51668 147 aa11.23□□□□□ -0.61
CSDC2-201ENST00000306149 OPRPNQ99935 248 aaPredicted RBP11.23□□□□□ -0.61
CSDC2-201ENST00000306149 IGHV3-16A0A0C4DH30 117 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 A0A0J9YX75 114 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 HTN1P15515 57 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 AZU1P20160 251 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 HERVK_113P61574 105 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 ZNF56Q15929 161 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 TMEM141Q96I45 108 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 KIR2DL4Q99706 377 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 PGPEP1Q9NXJ5 209 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 VCYO14598 125 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 PMVKQ15126 192 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 SFTA2Q6UW10 78 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 TIMM17AQ99595 171 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 SONP18583 2426 aaKnown RBP11.22□□□□□ -0.61
CSDC2-201ENST00000306149 SCGB1A1P11684 91 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 SNRPD3P62318 126 aaKnown RBP11.22□□□□□ -0.61
CSDC2-201ENST00000306149 ETDBQ3ZM63 59 aa11.22□□□□□ -0.61
CSDC2-201ENST00000306149 TSSC4Q9Y5U2 329 aaPredicted RBP11.22□□□□□ -0.61
CSDC2-201ENST00000306149 SH2D6Q7Z4S9 175 aa11.21□□□□□ -0.61
CSDC2-201ENST00000306149 SPATA25Q9BR10 227 aa11.21□□□□□ -0.61
CSDC2-201ENST00000306149 MRPL16Q9NX20 251 aaKnown RBP11.21□□□□□ -0.61
CSDC2-201ENST00000306149 NOTCH3Q9UM47 2321 aa11.2□□□□□ -0.62
CSDC2-201ENST00000306149 SETD2Q9BYW2 2564 aaPredicted RBP11.2□□□□□ -0.62
CSDC2-201ENST00000306149 GAGE12HA6NDE8 117 aa11.2□□□□□ -0.62
CSDC2-201ENST00000306149 K7EQG2 157 aa11.2□□□□□ -0.62
CSDC2-201ENST00000306149 PRM2P04554 102 aa11.2□□□□□ -0.62
CSDC2-201ENST00000306149 SRSF9Q13242 221 aaKnown RBP eCLIP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms