RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 WNK1Q9H4A3 2382 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 TRAV2A0A0B4J234 112 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 IGHV3-16A0A0C4DH30 117 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 A8MTW9 85 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 H3BMM0 161 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 CCL24O00175 119 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 DUSP14O95147 198 aaKnown RBP4.83□□□□□ -1.64
USP47-201ENST00000305481 LY6G6DO95868 133 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 HBDP02042 147 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 BATFQ16520 125 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 ZNF705AQ6ZN79 300 aaPredicted RBP4.83□□□□□ -1.64
USP47-201ENST00000305481 Q8N1Y9 231 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 Q8N8P6 123 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 NXT2Q9NPJ8 142 aaKnown RBP4.83□□□□□ -1.64
USP47-201ENST00000305481 ZNF256Q9Y2P7 627 aaPredicted RBP4.83□□□□□ -1.64
USP47-201ENST00000305481 HLA-DRB4P13762 266 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 RASL10AQ92737 203 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 MRAP2Q96G30 205 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 C9orf85Q96MD7 179 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 DPH3P1Q9H4G8 78 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 HLA-DRB4X5D2U9 266 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 hDV102S1A0JD36 115 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 POM121L12Q8N7R1 296 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 MAP6D1Q9H9H5 199 aa4.83□□□□□ -1.64
USP47-201ENST00000305481 IGHV1OR15-1A0A075B7D0 117 aa4.82□□□□□ -1.64
USP47-201ENST00000305481 TSPOP30536 169 aa4.82□□□□□ -1.64
USP47-201ENST00000305481 DYNLRB2Q8TF09 96 aa4.82□□□□□ -1.64
USP47-201ENST00000305481 RPL39LQ96EH5 51 aaKnown RBP4.82□□□□□ -1.64
USP47-201ENST00000305481 ADARB2-AS1A8MUL3 147 aa4.82□□□□□ -1.64
USP47-201ENST00000305481 K7EP13 123 aa4.82□□□□□ -1.64
USP47-201ENST00000305481 FCER1GP30273 86 aa4.82□□□□□ -1.64
USP47-201ENST00000305481 ZNF418Q8TF45 676 aaPredicted RBP4.82□□□□□ -1.64
USP47-201ENST00000305481 TP73-AS1Q9UF72 201 aa4.82□□□□□ -1.64
USP47-201ENST00000305481 TSSC4Q9Y5U2 329 aaPredicted RBP4.82□□□□□ -1.64
USP47-201ENST00000305481 PRM2P04554 102 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 TMEM158Q8WZ71 300 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 ZNF479Q96JC4 524 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 AP1S3Q96PC3 154 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 NSD1Q96L73 2696 aaPredicted RBP4.81□□□□□ -1.64
USP47-201ENST00000305481 C20orf202A1L168 122 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 MGPP08493 103 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 PROK1P58294 105 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 SCGB2A2Q13296 93 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 IFI27L1Q96BM0 104 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 C18orf15Q96N68 181 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 HIVEP1P15822 2718 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 A0A087WWL8 130 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 ODF3L2Q3SX64 289 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 SPAG8Q99932 426 aaPredicted RBP4.81□□□□□ -1.64
USP47-201ENST00000305481 UQCR10Q9UDW1 63 aa4.81□□□□□ -1.64
USP47-201ENST00000305481 NDUFA7O95182 113 aa4.8□□□□□ -1.64
USP47-201ENST00000305481 KRTAP10-3P60369 221 aa4.8□□□□□ -1.64
USP47-201ENST00000305481 SUMO2P61956 95 aaKnown RBP4.8□□□□□ -1.64
USP47-201ENST00000305481 LAGE3Q14657 143 aa4.8□□□□□ -1.64
USP47-201ENST00000305481 SMIM2Q9BVW6 85 aa4.8□□□□□ -1.64
USP47-201ENST00000305481 C20orf78Q9BR46 151 aa4.8□□□□□ -1.64
USP47-201ENST00000305481 CRYGDP07320 174 aa4.8□□□□□ -1.64
USP47-201ENST00000305481 SMIM17P0DL12 118 aa4.8□□□□□ -1.64
USP47-201ENST00000305481 LGALS9BQ3B8N2 356 aa4.8□□□□□ -1.64
USP47-201ENST00000305481 LGALS9CQ6DKI2 356 aa4.8□□□□□ -1.64
USP47-201ENST00000305481 SUMO4Q6EEV6 95 aa4.8□□□□□ -1.64
USP47-201ENST00000305481 Q6ZN92 141 aa4.8□□□□□ -1.64
USP47-201ENST00000305481 ST20Q9HBF5 79 aa4.8□□□□□ -1.64
USP47-201ENST00000305481 TRAV25A0A0B4J276 109 aa4.79□□□□□ -1.64
USP47-201ENST00000305481 CRYBA4P53673 196 aa4.79□□□□□ -1.64
USP47-201ENST00000305481 ERASQ7Z444 233 aa4.79□□□□□ -1.64
USP47-201ENST00000305481 DKK2Q9UBU2 259 aa4.79□□□□□ -1.64
USP47-201ENST00000305481 JMJD1CQ15652 2540 aa4.79□□□□□ -1.64
USP47-201ENST00000305481 FN1P02751 2386 aaKnown RBP4.79□□□□□ -1.64
USP47-201ENST00000305481 TRAV26-1A0A087WT03 109 aa4.79□□□□□ -1.64
USP47-201ENST00000305481 INAFM1C9JVW0 142 aa4.79□□□□□ -1.64
USP47-201ENST00000305481 HTN1P15515 57 aa4.79□□□□□ -1.64
USP47-201ENST00000305481 NEGR1Q7Z3B1 354 aa4.79□□□□□ -1.64
USP47-201ENST00000305481 NSUN5P1Q3KNT7 163 aa4.78□□□□□ -1.64
USP47-201ENST00000305481 ZNF876PQ49A33 203 aa4.78□□□□□ -1.64
USP47-201ENST00000305481 FAM74A4Q5TZK3 123 aa4.78□□□□□ -1.64
USP47-201ENST00000305481 MORN3Q6PF18 240 aaPredicted RBP4.78□□□□□ -1.64
USP47-201ENST00000305481 VWFP04275 2813 aa4.78□□□□□ -1.64
USP47-201ENST00000305481 TRGV11A0A075B6L2 103 aa4.78□□□□□ -1.64
USP47-201ENST00000305481 POLR2KP53803 58 aaKnown RBP4.78□□□□□ -1.64
USP47-201ENST00000305481 MRPL52Q86TS9 123 aaKnown RBP4.78□□□□□ -1.64
USP47-201ENST00000305481 STPG4Q8N801 248 aa4.78□□□□□ -1.64
USP47-201ENST00000305481 ZMAT4Q9H898 229 aa4.78□□□□□ -1.64
USP47-201ENST00000305481 TENM1Q9UKZ4 2725 aa4.78□□□□□ -1.64
USP47-201ENST00000305481 C2CD3Q4AC94 2353 aa4.78□□□□□ -1.64
USP47-201ENST00000305481 M0QY20 66 aa4.78□□□□□ -1.64
USP47-201ENST00000305481 NUDT3O95989 172 aa4.78□□□□□ -1.64
USP47-201ENST00000305481 HNRNPA3P51991 378 aaKnown RBP4.78□□□□□ -1.64
USP47-201ENST00000305481 SYT8Q8NBV8 401 aa4.78□□□□□ -1.64
USP47-201ENST00000305481 DEFB104AQ8WTQ1 72 aa4.78□□□□□ -1.64
USP47-201ENST00000305481 MRPS16Q9Y3D3 137 aaKnown RBP4.78□□□□□ -1.64
USP47-201ENST00000305481 F5H697 171 aa4.77□□□□□ -1.65
USP47-201ENST00000305481 SAP30O75446 220 aa4.77□□□□□ -1.65
USP47-201ENST00000305481 CITED1Q99966 193 aa4.77□□□□□ -1.65
USP47-201ENST00000305481 PPP1R17O96001 155 aa4.77□□□□□ -1.65
USP47-201ENST00000305481 IGLV1-51P01701 117 aa4.77□□□□□ -1.65
USP47-201ENST00000305481 PRSS1P07477 247 aa4.77□□□□□ -1.65
USP47-201ENST00000305481 TRPT1Q86TN4 253 aaKnown RBP4.77□□□□□ -1.65
USP47-201ENST00000305481 C11orf72Q8NBR9 251 aa4.77□□□□□ -1.65
USP47-201ENST00000305481 TOMM6Q96B49 74 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms