RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 FRZBQ92765 325 aa11.14□□□□□ -0.63
TRAPPC1-201ENST00000303731 SFRP2Q96HF1 295 aa11.14□□□□□ -0.63
TRAPPC1-201ENST00000303731 TMEM70Q9BUB7 260 aa11.14□□□□□ -0.63
TRAPPC1-201ENST00000303731 JPT2Q9H910 190 aa11.14□□□□□ -0.63
TRAPPC1-201ENST00000303731 COX11Q9Y6N1 276 aa11.14□□□□□ -0.63
TRAPPC1-201ENST00000303731 A0A0D9SG52 128 aa11.13□□□□□ -0.63
TRAPPC1-201ENST00000303731 HMSDA8MTL9 139 aa11.13□□□□□ -0.63
TRAPPC1-201ENST00000303731 EIF5AP63241 154 aaKnown RBP11.13□□□□□ -0.63
TRAPPC1-201ENST00000303731 FAM74A4Q5TZK3 123 aa11.13□□□□□ -0.63
TRAPPC1-201ENST00000303731 MBD3L1Q8WWY6 194 aa11.13□□□□□ -0.63
TRAPPC1-201ENST00000303731 SAMD10Q9BYL1 202 aa11.13□□□□□ -0.63
TRAPPC1-201ENST00000303731 TRBV10-1A0A0K0K1A3 114 aa11.12□□□□□ -0.63
TRAPPC1-201ENST00000303731 GRIFINA4D1Z8 144 aa11.12□□□□□ -0.63
TRAPPC1-201ENST00000303731 PAGE4O60829 102 aa11.12□□□□□ -0.63
TRAPPC1-201ENST00000303731 PFDN1O60925 122 aa11.12□□□□□ -0.63
TRAPPC1-201ENST00000303731 C14orf178Q8N769 122 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC1-201ENST00000303731 SFT2D1Q8WV19 159 aa11.12□□□□□ -0.63
TRAPPC1-201ENST00000303731 URGCP-MRPS24S4R325 110 aa11.12□□□□□ -0.63
TRAPPC1-201ENST00000303731 KANTRA0A1W2PQU2 76 aa11.11□□□□□ -0.63
TRAPPC1-201ENST00000303731 M0R381 172 aa11.11□□□□□ -0.63
TRAPPC1-201ENST00000303731 CXCL1P09341 107 aa11.11□□□□□ -0.63
TRAPPC1-201ENST00000303731 FAM213BQ8TBF2 198 aa11.11□□□□□ -0.63
TRAPPC1-201ENST00000303731 RMI2Q96E14 147 aa11.11□□□□□ -0.63
TRAPPC1-201ENST00000303731 CHCHD7Q9BUK0 85 aa11.11□□□□□ -0.63
TRAPPC1-201ENST00000303731 FAT1Q14517 4588 aa11.1□□□□□ -0.63
TRAPPC1-201ENST00000303731 C1QBP02746 253 aa11.1□□□□□ -0.63
TRAPPC1-201ENST00000303731 Q5VSD8 79 aa11.1□□□□□ -0.63
TRAPPC1-201ENST00000303731 ZNF471Q9BX82 626 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-201ENST00000303731 A0A087WWL8 130 aa11.09□□□□□ -0.63
TRAPPC1-201ENST00000303731 TMSB15BA0A087X1C1 80 aa11.09□□□□□ -0.63
TRAPPC1-201ENST00000303731 SMLR1H3BR10 107 aa11.09□□□□□ -0.63
TRAPPC1-201ENST00000303731 BCL2L11O43521 198 aa11.09□□□□□ -0.63
TRAPPC1-201ENST00000303731 RPL36AP83881 106 aaKnown RBP11.09□□□□□ -0.63
TRAPPC1-201ENST00000303731 KCNIP4Q6PIL6 250 aa11.09□□□□□ -0.63
TRAPPC1-201ENST00000303731 RPL36ALQ969Q0 106 aaKnown RBP11.09□□□□□ -0.63
TRAPPC1-201ENST00000303731 H2AFB1P0C5Y9 115 aa11.08□□□□□ -0.64
TRAPPC1-201ENST00000303731 ELOBQ15370 118 aa11.08□□□□□ -0.64
TRAPPC1-201ENST00000303731 DAZ4Q86SG3 579 aaKnown RBP11.08□□□□□ -0.64
TRAPPC1-201ENST00000303731 DAZ3Q9NR90 486 aaKnown RBP11.08□□□□□ -0.64
TRAPPC1-201ENST00000303731 Q9UF83 564 aa11.08□□□□□ -0.64
TRAPPC1-201ENST00000303731 TRBV7-3A0A075B6L6 115 aa11.07□□□□□ -0.64
TRAPPC1-201ENST00000303731 FAM229AH3BQW9 127 aa11.07□□□□□ -0.64
TRAPPC1-201ENST00000303731 INAFM2P0DMQ5 153 aa11.07□□□□□ -0.64
TRAPPC1-201ENST00000303731 RAB4BP61018 213 aa11.07□□□□□ -0.64
TRAPPC1-201ENST00000303731 NIT1Q86X76 327 aa11.07□□□□□ -0.64
TRAPPC1-201ENST00000303731 BAGE2Q86Y30 109 aa11.07□□□□□ -0.64
TRAPPC1-201ENST00000303731 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC1-201ENST00000303731 MLST8Q9BVC4 326 aa11.07□□□□□ -0.64
TRAPPC1-201ENST00000303731 A0A087WX48 190 aa11.06□□□□□ -0.64
TRAPPC1-201ENST00000303731 SCO2A0A1W2PP80 73 aa11.06□□□□□ -0.64
TRAPPC1-201ENST00000303731 Q8N3U1 123 aa11.06□□□□□ -0.64
TRAPPC1-201ENST00000303731 OR10G8Q8NGN5 311 aa11.06□□□□□ -0.64
TRAPPC1-201ENST00000303731 DMBT1Q9UGM3 2413 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC1-201ENST00000303731 OR5AL1P0C617 328 aa11.05□□□□□ -0.64
TRAPPC1-201ENST00000303731 UBE2D3P61077 147 aa11.05□□□□□ -0.64
TRAPPC1-201ENST00000303731 UBE2D2P62837 147 aa11.05□□□□□ -0.64
TRAPPC1-201ENST00000303731 MANBALQ9NQG1 85 aa11.05□□□□□ -0.64
TRAPPC1-201ENST00000303731 A0A1B0GV50 99 aa11.04□□□□□ -0.64
TRAPPC1-201ENST00000303731 TEX46H3BTG2 121 aa11.04□□□□□ -0.64
TRAPPC1-201ENST00000303731 SNAI2O43623 268 aa11.04□□□□□ -0.64
TRAPPC1-201ENST00000303731 RAB5CP51148 216 aa11.04□□□□□ -0.64
TRAPPC1-201ENST00000303731 ZNF56Q15929 161 aa11.04□□□□□ -0.64
TRAPPC1-201ENST00000303731 EIF5AL1Q6IS14 154 aaKnown RBP11.04□□□□□ -0.64
TRAPPC1-201ENST00000303731 TMUB2Q71RG4 321 aa11.04□□□□□ -0.64
TRAPPC1-201ENST00000303731 SSBP4Q9BWG4 385 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC1-201ENST00000303731 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
TRAPPC1-201ENST00000303731 PKIAP61925 76 aa11.03□□□□□ -0.64
TRAPPC1-201ENST00000303731 Q0VG73 95 aa11.03□□□□□ -0.64
TRAPPC1-201ENST00000303731 SPANXN1Q5VSR9 72 aa11.03□□□□□ -0.64
TRAPPC1-201ENST00000303731 Q8N976 141 aa11.03□□□□□ -0.64
TRAPPC1-201ENST00000303731 OR10AG1Q8NH19 301 aa11.03□□□□□ -0.64
TRAPPC1-201ENST00000303731 TRAV1-1A0A0B4J248 108 aa11.02□□□□□ -0.65
TRAPPC1-201ENST00000303731 SMR3BP02814 79 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC1-201ENST00000303731 RPL19P84098 196 aaKnown RBP11.02□□□□□ -0.65
TRAPPC1-201ENST00000303731 TMEM97Q5BJF2 176 aa11.02□□□□□ -0.65
TRAPPC1-201ENST00000303731 PRR27Q6MZM9 219 aa11.02□□□□□ -0.65
TRAPPC1-201ENST00000303731 KLK12Q9UKR0 248 aa11.02□□□□□ -0.65
TRAPPC1-201ENST00000303731 DNAH8Q96JB1 4490 aa11.01□□□□□ -0.65
TRAPPC1-201ENST00000303731 SRRM2Q9UQ35 2752 aaKnown RBP11.01□□□□□ -0.65
TRAPPC1-201ENST00000303731 IGKV2D-24A0A075B6R9 120 aa11.01□□□□□ -0.65
TRAPPC1-201ENST00000303731 TRBV6-8A0A0A6YYG3 113 aa11.01□□□□□ -0.65
TRAPPC1-201ENST00000303731 RPL35P42766 123 aaKnown RBP11.01□□□□□ -0.65
TRAPPC1-201ENST00000303731 WFDC2Q14508 124 aa11.01□□□□□ -0.65
TRAPPC1-201ENST00000303731 ATRAIDQ6UW56 229 aa11.01□□□□□ -0.65
TRAPPC1-201ENST00000303731 C11orf52Q96A22 123 aa11.01□□□□□ -0.65
TRAPPC1-201ENST00000303731 SMIM12Q96EX1 92 aa11.01□□□□□ -0.65
TRAPPC1-201ENST00000303731 RBFOX3A6NFN3 312 aa11□□□□□ -0.65
TRAPPC1-201ENST00000303731 SMIM17P0DL12 118 aa11□□□□□ -0.65
TRAPPC1-201ENST00000303731 NEXN-AS1Q8NBZ9 246 aa11□□□□□ -0.65
TRAPPC1-201ENST00000303731 UBE2WQ96B02 151 aa11□□□□□ -0.65
TRAPPC1-201ENST00000303731 AP1S3Q96PC3 154 aa11□□□□□ -0.65
TRAPPC1-201ENST00000303731 GNG13Q9P2W3 67 aa11□□□□□ -0.65
TRAPPC1-201ENST00000303731 TMEM262E9PQX1 116 aa10.99□□□□□ -0.65
TRAPPC1-201ENST00000303731 LECT2O14960 151 aa10.99□□□□□ -0.65
TRAPPC1-201ENST00000303731 Q6ZSA8 131 aa10.99□□□□□ -0.65
TRAPPC1-201ENST00000303731 BAALCQ8WXS3 180 aa10.99□□□□□ -0.65
TRAPPC1-201ENST00000303731 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC1-201ENST00000303731 F5H697 171 aa10.98□□□□□ -0.65
TRAPPC1-201ENST00000303731 CRPP02741 224 aa10.98□□□□□ -0.65
TRAPPC1-201ENST00000303731 RPS20P60866 119 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms