RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 Q8N1Y9 231 aa13.86□□□□□ -0.19
RNF139-201ENST00000303545 KIF25-AS1Q9Y6Z4 181 aa13.85□□□□□ -0.19
RNF139-201ENST00000303545 MED14OSP0DP75 135 aa13.85□□□□□ -0.19
RNF139-201ENST00000303545 AMMECR1LQ6DCA0 310 aa13.85□□□□□ -0.19
RNF139-201ENST00000303545 SUMO4Q6EEV6 95 aa13.85□□□□□ -0.19
RNF139-201ENST00000303545 C11orf44Q8N8P7 122 aa13.85□□□□□ -0.19
RNF139-201ENST00000303545 C2orf66Q6UXQ4 117 aa13.84□□□□□ -0.19
RNF139-201ENST00000303545 A0A087WX48 190 aa13.84□□□□□ -0.19
RNF139-201ENST00000303545 TRAV8-6A0A0B4J262 113 aa13.84□□□□□ -0.19
RNF139-201ENST00000303545 K7EMI3 77 aa13.84□□□□□ -0.19
RNF139-201ENST00000303545 KRTAP1-3Q8IUG1 177 aa13.84□□□□□ -0.19
RNF139-201ENST00000303545 WFDC11Q8NEX6 87 aa13.84□□□□□ -0.19
RNF139-201ENST00000303545 OR11H1Q8NG94 326 aa13.84□□□□□ -0.19
RNF139-201ENST00000303545 RAB37Q96AX2 223 aa13.84□□□□□ -0.19
RNF139-201ENST00000303545 C20orf78Q9BR46 151 aa13.84□□□□□ -0.19
RNF139-201ENST00000303545 NIPBLQ6KC79 2804 aaeCLIP13.84□□□□□ -0.19
RNF139-201ENST00000303545 ORMDL2Q53FV1 153 aa13.83□□□□□ -0.19
RNF139-201ENST00000303545 IGHV3-16A0A0C4DH30 117 aa13.83□□□□□ -0.2
RNF139-201ENST00000303545 TOMM6Q96B49 74 aa13.83□□□□□ -0.2
RNF139-201ENST00000303545 ACANP16112 2415 aa13.82□□□□□ -0.2
RNF139-201ENST00000303545 NXPH4O95158 308 aa13.82□□□□□ -0.2
RNF139-201ENST00000303545 MAPKAPK5-AS1Q8N8E1 139 aa13.82□□□□□ -0.2
RNF139-201ENST00000303545 OR9G4Q8NGQ1 327 aa13.82□□□□□ -0.2
RNF139-201ENST00000303545 LGALS9O00182 355 aa13.81□□□□□ -0.2
RNF139-201ENST00000303545 DEFB131AP59861 70 aa13.81□□□□□ -0.2
RNF139-201ENST00000303545 DUSP14O95147 198 aaKnown RBP13.81□□□□□ -0.2
RNF139-201ENST00000303545 SAMD13Q5VXD3 122 aa13.81□□□□□ -0.2
RNF139-201ENST00000303545 RBMY1A1P0DJD3 496 aaKnown RBP13.8□□□□□ -0.2
RNF139-201ENST00000303545 RBMY1CP0DJD4 496 aa13.8□□□□□ -0.2
RNF139-201ENST00000303545 EMP1P54849 157 aa13.8□□□□□ -0.2
RNF139-201ENST00000303545 RPL39P62891 51 aaKnown RBP13.8□□□□□ -0.2
RNF139-201ENST00000303545 RBMY1FQ15415 496 aaKnown RBP13.8□□□□□ -0.2
RNF139-201ENST00000303545 ZNF56Q15929 161 aa13.8□□□□□ -0.2
RNF139-201ENST00000303545 CHTOPQ9Y3Y2 248 aaKnown RBP13.8□□□□□ -0.2
RNF139-201ENST00000303545 IGHV1OR15-1A0A075B7D0 117 aa13.8□□□□□ -0.2
RNF139-201ENST00000303545 GCSHP23434 173 aa13.8□□□□□ -0.2
RNF139-201ENST00000303545 HSD52Q0P140 79 aa13.8□□□□□ -0.2
RNF139-201ENST00000303545 ZNF256Q9Y2P7 627 aaPredicted RBP13.8□□□□□ -0.2
RNF139-201ENST00000303545 BAALCQ8WXS3 180 aa13.79□□□□□ -0.2
RNF139-201ENST00000303545 TRBV25-1A0A075B6N4 114 aa13.78□□□□□ -0.2
RNF139-201ENST00000303545 IGHV3-73A0A0B4J1V6 119 aa13.78□□□□□ -0.2
RNF139-201ENST00000303545 A0A1W2PRX2 142 aa13.78□□□□□ -0.2
RNF139-201ENST00000303545 C9orf85Q96MD7 179 aa13.78□□□□□ -0.2
RNF139-201ENST00000303545 H7C1H1 209 aa13.78□□□□□ -0.2
RNF139-201ENST00000303545 SEC11AP67812 179 aa13.78□□□□□ -0.2
RNF139-201ENST00000303545 AMTNQ6UX39 209 aa13.78□□□□□ -0.2
RNF139-201ENST00000303545 TMEM61Q8N0U2 210 aa13.78□□□□□ -0.2
RNF139-201ENST00000303545 NEXN-AS1Q8NBZ9 246 aa13.78□□□□□ -0.2
RNF139-201ENST00000303545 KLHL30-AS1Q8NEE0 82 aa13.78□□□□□ -0.2
RNF139-201ENST00000303545 DLX4Q92988 240 aaPredicted RBP13.78□□□□□ -0.2
RNF139-201ENST00000303545 CHAC1Q9BUX1 264 aa13.78□□□□□ -0.2
RNF139-201ENST00000303545 TP53TG1Q9Y2A0 90 aa13.78□□□□□ -0.2
RNF139-201ENST00000303545 LINC01619G3V211 115 aa13.77□□□□□ -0.2
RNF139-201ENST00000303545 SDHAF1A6NFY7 115 aa13.77□□□□□ -0.21
RNF139-201ENST00000303545 F8VRH5 84 aa13.77□□□□□ -0.21
RNF139-201ENST00000303545 SIVA1O15304 175 aa13.77□□□□□ -0.21
RNF139-201ENST00000303545 FOXI2Q6ZQN5 318 aa13.77□□□□□ -0.21
RNF139-201ENST00000303545 RNF152Q8N8N0 203 aa13.77□□□□□ -0.21
RNF139-201ENST00000303545 ITPR2Q14571 2701 aa13.77□□□□□ -0.21
RNF139-201ENST00000303545 PRSS29PA6NIE9 313 aa13.77□□□□□ -0.21
RNF139-201ENST00000303545 FXYD2P54710 66 aa13.77□□□□□ -0.21
RNF139-201ENST00000303545 ZNF876PQ49A33 203 aa13.77□□□□□ -0.21
RNF139-201ENST00000303545 CST9LQ9H4G1 147 aa13.77□□□□□ -0.21
RNF139-201ENST00000303545 H3BUT2 72 aa13.76□□□□□ -0.21
RNF139-201ENST00000303545 LRRC75A-AS1Q8N1F1 130 aa13.76□□□□□ -0.21
RNF139-201ENST00000303545 POM121L12Q8N7R1 296 aa13.76□□□□□ -0.21
RNF139-201ENST00000303545 PLNP26678 52 aa13.76□□□□□ -0.21
RNF139-201ENST00000303545 ZFP2Q6ZN57 461 aa13.76□□□□□ -0.21
RNF139-201ENST00000303545 ODF3Q96PU9 254 aa13.76□□□□□ -0.21
RNF139-201ENST00000303545 JMJD8Q96S16 334 aa13.76□□□□□ -0.21
RNF139-201ENST00000303545 MTORP42345 2549 aa13.75□□□□□ -0.21
RNF139-201ENST00000303545 RBMY1BA6NDE4 496 aaKnown RBP13.75□□□□□ -0.21
RNF139-201ENST00000303545 A6NDN8 102 aa13.75□□□□□ -0.21
RNF139-201ENST00000303545 RBMY1EA6NEQ0 496 aaKnown RBP13.75□□□□□ -0.21
RNF139-201ENST00000303545 K7ERJ3 54 aa13.75□□□□□ -0.21
RNF139-201ENST00000303545 CRYGDP07320 174 aa13.75□□□□□ -0.21
RNF139-201ENST00000303545 RBMY1DP0C7P1 496 aaKnown RBP13.75□□□□□ -0.21
RNF139-201ENST00000303545 OCIAD2Q56VL3 154 aa13.75□□□□□ -0.21
RNF139-201ENST00000303545 MORN3Q6PF18 240 aaPredicted RBP13.75□□□□□ -0.21
RNF139-201ENST00000303545 HLA-DRB4P13762 266 aa13.75□□□□□ -0.21
RNF139-201ENST00000303545 POLR2KP53803 58 aaKnown RBP13.75□□□□□ -0.21
RNF139-201ENST00000303545 VPS25Q9BRG1 176 aa13.75□□□□□ -0.21
RNF139-201ENST00000303545 HLA-DRB4X5D2U9 266 aa13.75□□□□□ -0.21
RNF139-201ENST00000303545 TRAV12-1A0A0B4J245 112 aa13.74□□□□□ -0.21
RNF139-201ENST00000303545 TSHBP01222 138 aa13.74□□□□□ -0.21
RNF139-201ENST00000303545 PPP1R17O96001 155 aa13.74□□□□□ -0.21
RNF139-201ENST00000303545 SYT8Q8NBV8 401 aa13.74□□□□□ -0.21
RNF139-201ENST00000303545 PROK1P58294 105 aa13.73□□□□□ -0.21
RNF139-201ENST00000303545 Q6ZSV7 163 aa13.73□□□□□ -0.21
RNF139-201ENST00000303545 Q8N2B8 174 aa13.73□□□□□ -0.21
RNF139-201ENST00000303545 DYNLRB2Q8TF09 96 aa13.73□□□□□ -0.21
RNF139-201ENST00000303545 CYSLTR1Q9Y271 337 aa13.73□□□□□ -0.21
RNF139-201ENST00000303545 KIR2DL4Q99706 377 aa13.73□□□□□ -0.21
RNF139-201ENST00000303545 PDZD2O15018 2839 aa13.73□□□□□ -0.21
RNF139-201ENST00000303545 P0DMU3 169 aa13.72□□□□□ -0.21
RNF139-201ENST00000303545 FAM231AP0DMU4 169 aa13.72□□□□□ -0.21
RNF139-201ENST00000303545 FAM231CP0DMU5 169 aa13.72□□□□□ -0.21
RNF139-201ENST00000303545 OPRPNQ99935 248 aaPredicted RBP13.72□□□□□ -0.21
RNF139-201ENST00000303545 DNAJC9-AS1A6NH13 148 aa13.72□□□□□ -0.21
RNF139-201ENST00000303545 M0QY20 66 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 273.8 ms