RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 RRN3P1Q2M238 152 aa9.39□□□□□ -0.91
CCDC7-202ENST00000302316 MRAP2Q96G30 205 aa9.39□□□□□ -0.91
CCDC7-202ENST00000302316 C16orf74Q96GX8 76 aa9.39□□□□□ -0.91
CCDC7-202ENST00000302316 KIF25-AS1Q9Y6Z4 181 aa9.39□□□□□ -0.91
CCDC7-202ENST00000302316 IFITM10A6NMD0 228 aa9.38□□□□□ -0.91
CCDC7-202ENST00000302316 RNASEKQ6P5S7 137 aaKnown RBP9.38□□□□□ -0.91
CCDC7-202ENST00000302316 IL17DQ8TAD2 202 aa9.38□□□□□ -0.91
CCDC7-202ENST00000302316 MRPL16Q9NX20 251 aaKnown RBP9.38□□□□□ -0.91
CCDC7-202ENST00000302316 ESDP10768 282 aa9.38□□□□□ -0.91
CCDC7-202ENST00000302316 FABP4P15090 132 aa9.38□□□□□ -0.91
CCDC7-202ENST00000302316 GATA1P15976 413 aaPredicted RBP9.38□□□□□ -0.91
CCDC7-202ENST00000302316 PTH2Q96A98 100 aa9.38□□□□□ -0.91
CCDC7-202ENST00000302316 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
CCDC7-202ENST00000302316 LAMTOR2Q9Y2Q5 125 aa9.38□□□□□ -0.91
CCDC7-202ENST00000302316 CMYA5Q8N3K9 4069 aa9.38□□□□□ -0.91
CCDC7-202ENST00000302316 LOC389332A0A1B0GUA5 103 aa9.37□□□□□ -0.91
CCDC7-202ENST00000302316 TNFRSF6BO95407 300 aa9.37□□□□□ -0.91
CCDC7-202ENST00000302316 PIK3CD-AS1Q5SR53 167 aa9.37□□□□□ -0.91
CCDC7-202ENST00000302316 SAMD5Q5TGI4 173 aa9.37□□□□□ -0.91
CCDC7-202ENST00000302316 NIT1Q86X76 327 aa9.37□□□□□ -0.91
CCDC7-202ENST00000302316 HIST1H2BLQ99880 126 aa9.37□□□□□ -0.91
CCDC7-202ENST00000302316 CRYGDP07320 174 aa9.37□□□□□ -0.91
CCDC7-202ENST00000302316 LINC00315P59091 139 aa9.37□□□□□ -0.91
CCDC7-202ENST00000302316 ZNF56Q15929 161 aa9.37□□□□□ -0.91
CCDC7-202ENST00000302316 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
CCDC7-202ENST00000302316 TMEM18Q96B42 140 aa9.37□□□□□ -0.91
CCDC7-202ENST00000302316 URB1-AS1Q96HZ7 61 aa9.37□□□□□ -0.91
CCDC7-202ENST00000302316 TRGV1A0A0A0MS02 117 aa9.36□□□□□ -0.91
CCDC7-202ENST00000302316 A8MWV9 139 aa9.36□□□□□ -0.91
CCDC7-202ENST00000302316 F5H697 171 aa9.36□□□□□ -0.91
CCDC7-202ENST00000302316 HSBP1O75506 76 aa9.36□□□□□ -0.91
CCDC7-202ENST00000302316 LURAP1LQ8IV03 231 aa9.36□□□□□ -0.91
CCDC7-202ENST00000302316 POM121L12Q8N7R1 296 aa9.36□□□□□ -0.91
CCDC7-202ENST00000302316 PRSS3P2Q8NHM4 247 aa9.36□□□□□ -0.91
CCDC7-202ENST00000302316 MAP1LC3AQ9H492 121 aa9.36□□□□□ -0.91
CCDC7-202ENST00000302316 PMCHP20382 165 aa9.35□□□□□ -0.91
CCDC7-202ENST00000302316 SUMO4Q6EEV6 95 aa9.35□□□□□ -0.91
CCDC7-202ENST00000302316 NRACQ8N912 160 aa9.35□□□□□ -0.91
CCDC7-202ENST00000302316 NOP10Q9NPE3 64 aaKnown RBP9.35□□□□□ -0.91
CCDC7-202ENST00000302316 PLAC8L1A1L4L8 177 aa9.35□□□□□ -0.91
CCDC7-202ENST00000302316 LINC00614P0C842 121 aa9.35□□□□□ -0.91
CCDC7-202ENST00000302316 IFI27P40305 119 aaPredicted RBP9.35□□□□□ -0.91
CCDC7-202ENST00000302316 FA2HQ7L5A8 372 aa9.35□□□□□ -0.91
CCDC7-202ENST00000302316 RASL10AQ92737 203 aa9.35□□□□□ -0.91
CCDC7-202ENST00000302316 CHCHD1Q96BP2 118 aaKnown RBP9.35□□□□□ -0.91
CCDC7-202ENST00000302316 PACRGQ96M98 296 aaPredicted RBP9.35□□□□□ -0.91
CCDC7-202ENST00000302316 AMTP48728 403 aa9.34□□□□□ -0.91
CCDC7-202ENST00000302316 DAZ2Q13117 558 aaKnown RBP9.34□□□□□ -0.91
CCDC7-202ENST00000302316 RPL39LQ96EH5 51 aaKnown RBP9.34□□□□□ -0.91
CCDC7-202ENST00000302316 NDUFAF3Q9BU61 184 aa9.34□□□□□ -0.91
CCDC7-202ENST00000302316 X6R8D5 127 aa9.34□□□□□ -0.91
CCDC7-202ENST00000302316 IGHV3-73A0A0B4J1V6 119 aa9.34□□□□□ -0.91
CCDC7-202ENST00000302316 CFAP126Q5VTH2 177 aa9.34□□□□□ -0.91
CCDC7-202ENST00000302316 Q6ZTI0 123 aa9.34□□□□□ -0.91
CCDC7-202ENST00000302316 OR10D4PQ8NGN7 298 aa9.34□□□□□ -0.91
CCDC7-202ENST00000302316 EMP1P54849 157 aa9.33□□□□□ -0.92
CCDC7-202ENST00000302316 LGALS9BQ3B8N2 356 aa9.33□□□□□ -0.92
CCDC7-202ENST00000302316 FAM19A2Q8N3H0 131 aa9.33□□□□□ -0.92
CCDC7-202ENST00000302316 AP5S1Q9NUS5 200 aa9.33□□□□□ -0.92
CCDC7-202ENST00000302316 SMIM9A6NGZ8 99 aa9.32□□□□□ -0.92
CCDC7-202ENST00000302316 A8MZ25 164 aa9.32□□□□□ -0.92
CCDC7-202ENST00000302316 RHODO00212 210 aa9.32□□□□□ -0.92
CCDC7-202ENST00000302316 RS1O15537 224 aa9.32□□□□□ -0.92
CCDC7-202ENST00000302316 PPP1R17O96001 155 aa9.32□□□□□ -0.92
CCDC7-202ENST00000302316 PMCHL1Q16048 86 aa9.32□□□□□ -0.92
CCDC7-202ENST00000302316 UFSP1Q6NVU6 142 aa9.32□□□□□ -0.92
CCDC7-202ENST00000302316 OR11H2Q8NH07 326 aa9.32□□□□□ -0.92
CCDC7-202ENST00000302316 OVOL2Q9BRP0 275 aa9.32□□□□□ -0.92
CCDC7-202ENST00000302316 NXT2Q9NPJ8 142 aaKnown RBP9.32□□□□□ -0.92
CCDC7-202ENST00000302316 IGHV1-24A0A0C4DH33 117 aa9.31□□□□□ -0.92
CCDC7-202ENST00000302316 SUMO2P61956 95 aaKnown RBP9.31□□□□□ -0.92
CCDC7-202ENST00000302316 Q6ZWC4 215 aa9.31□□□□□ -0.92
CCDC7-202ENST00000302316 M0QY20 66 aa9.31□□□□□ -0.92
CCDC7-202ENST00000302316 OR4C5Q8NGB2 326 aa9.31□□□□□ -0.92
CCDC7-202ENST00000302316 C20orf78Q9BR46 151 aa9.31□□□□□ -0.92
CCDC7-202ENST00000302316 GAGE12BA1L429 117 aa9.3□□□□□ -0.92
CCDC7-202ENST00000302316 PRSS47A8MTI9 375 aa9.3□□□□□ -0.92
CCDC7-202ENST00000302316 GAGE7O76087 117 aa9.3□□□□□ -0.92
CCDC7-202ENST00000302316 GAGE12FP0CL80 117 aa9.3□□□□□ -0.92
CCDC7-202ENST00000302316 GAGE12GP0CL81 117 aa9.3□□□□□ -0.92
CCDC7-202ENST00000302316 GAGE12IP0CL82 117 aa9.3□□□□□ -0.92
CCDC7-202ENST00000302316 Q8N8P6 123 aa9.3□□□□□ -0.92
CCDC7-202ENST00000302316 RNF183Q96D59 192 aa9.3□□□□□ -0.92
CCDC7-202ENST00000302316 SMIM2Q9BVW6 85 aa9.3□□□□□ -0.92
CCDC7-202ENST00000302316 TRGV2A0A075B6R0 118 aa9.29□□□□□ -0.92
CCDC7-202ENST00000302316 TRAV4A0A0B4J268 109 aa9.29□□□□□ -0.92
CCDC7-202ENST00000302316 H7C1H1 209 aa9.29□□□□□ -0.92
CCDC7-202ENST00000302316 IGHV3-53P01767 116 aa9.29□□□□□ -0.92
CCDC7-202ENST00000302316 ZFP2Q6ZN57 461 aa9.29□□□□□ -0.92
CCDC7-202ENST00000302316 ST20Q9HBF5 79 aa9.29□□□□□ -0.92
CCDC7-202ENST00000302316 IGLV2-18A0A075B6J9 118 aa9.29□□□□□ -0.92
CCDC7-202ENST00000302316 ZNF479Q96JC4 524 aa9.29□□□□□ -0.92
CCDC7-202ENST00000302316 NBEAL2Q6ZNJ1 2754 aa9.28□□□□□ -0.92
CCDC7-202ENST00000302316 NACAE9PAV3 2078 aa9.28□□□□□ -0.92
CCDC7-202ENST00000302316 IGHV4-28A0A0C4DH34 117 aa9.28□□□□□ -0.92
CCDC7-202ENST00000302316 EDA2RQ9HAV5 297 aa9.28□□□□□ -0.92
CCDC7-202ENST00000302316 DNAH3Q8TD57 4116 aa9.28□□□□□ -0.92
CCDC7-202ENST00000302316 PRB2P02812 416 aaPredicted RBP9.28□□□□□ -0.92
CCDC7-202ENST00000302316 MIFP14174 115 aa9.28□□□□□ -0.92
CCDC7-202ENST00000302316 RIPPLY3P57055 190 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms