RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 PSMG4Q5JS54 123 aa13.4□□□□□ -0.26
TSPAN17-201ENST00000298564 XGP55808 180 aa13.4□□□□□ -0.26
TSPAN17-201ENST00000298564 DLX4Q92988 240 aaPredicted RBP13.4□□□□□ -0.26
TSPAN17-201ENST00000298564 GEMIN7Q9H840 131 aaKnown RBP13.4□□□□□ -0.26
TSPAN17-201ENST00000298564 IGHV3-64A0A075B6Q5 118 aa13.4□□□□□ -0.27
TSPAN17-201ENST00000298564 C11orf86A6NJI1 115 aa13.4□□□□□ -0.27
TSPAN17-201ENST00000298564 C1QTNF4Q9BXJ3 329 aa13.4□□□□□ -0.27
TSPAN17-201ENST00000298564 DOPEY1Q5JWR5 2465 aa13.39□□□□□ -0.27
TSPAN17-201ENST00000298564 NDUFA4O00483 81 aa13.39□□□□□ -0.27
TSPAN17-201ENST00000298564 SCGB1A1P11684 91 aa13.39□□□□□ -0.27
TSPAN17-201ENST00000298564 CRYBA4P53673 196 aa13.39□□□□□ -0.27
TSPAN17-201ENST00000298564 GPHB5Q86YW7 130 aa13.39□□□□□ -0.27
TSPAN17-201ENST00000298564 RAX2Q96IS3 184 aa13.39□□□□□ -0.27
TSPAN17-201ENST00000298564 CARD19Q96LW7 228 aa13.39□□□□□ -0.27
TSPAN17-201ENST00000298564 A0A087WWL8 130 aa13.38□□□□□ -0.27
TSPAN17-201ENST00000298564 RNF223E7ERA6 249 aa13.38□□□□□ -0.27
TSPAN17-201ENST00000298564 CRYGDP07320 174 aa13.38□□□□□ -0.27
TSPAN17-201ENST00000298564 GATA3P23771 443 aa13.38□□□□□ -0.27
TSPAN17-201ENST00000298564 ORMDL2Q53FV1 153 aa13.38□□□□□ -0.27
TSPAN17-201ENST00000298564 TRAV12-1A0A0B4J245 112 aa13.38□□□□□ -0.27
TSPAN17-201ENST00000298564 TCL1BO95988 128 aa13.38□□□□□ -0.27
TSPAN17-201ENST00000298564 C9orf139Q6ZV77 190 aa13.38□□□□□ -0.27
TSPAN17-201ENST00000298564 USMG5Q96IX5 58 aa13.38□□□□□ -0.27
TSPAN17-201ENST00000298564 OPRPNQ99935 248 aaPredicted RBP13.38□□□□□ -0.27
TSPAN17-201ENST00000298564 CREBBPQ92793 2442 aa13.38□□□□□ -0.27
TSPAN17-201ENST00000298564 MUC4Q99102 2169 aa13.37□□□□□ -0.27
TSPAN17-201ENST00000298564 TSPEAR-AS2P59090 65 aa13.37□□□□□ -0.27
TSPAN17-201ENST00000298564 TMEM170BQ5T4T1 132 aa13.37□□□□□ -0.27
TSPAN17-201ENST00000298564 CSPG4Q6UVK1 2322 aa13.37□□□□□ -0.27
TSPAN17-201ENST00000298564 SCGB1C2P0DMR2 95 aa13.37□□□□□ -0.27
TSPAN17-201ENST00000298564 TP53TG1Q9Y2A0 90 aa13.37□□□□□ -0.27
TSPAN17-201ENST00000298564 TSHBP01222 138 aa13.36□□□□□ -0.27
TSPAN17-201ENST00000298564 MRAP2Q96G30 205 aa13.36□□□□□ -0.27
TSPAN17-201ENST00000298564 PRSS47A8MTI9 375 aa13.36□□□□□ -0.27
TSPAN17-201ENST00000298564 ZFAND2AQ8N6M9 145 aa13.36□□□□□ -0.27
TSPAN17-201ENST00000298564 DOPEY2Q9Y3R5 2298 aa13.36□□□□□ -0.27
TSPAN17-201ENST00000298564 B4DSR2 109 aa13.35□□□□□ -0.27
TSPAN17-201ENST00000298564 F5H697 171 aa13.35□□□□□ -0.27
TSPAN17-201ENST00000298564 H3BUA1 57 aa13.35□□□□□ -0.27
TSPAN17-201ENST00000298564 DPH3P1Q9H4G8 78 aa13.35□□□□□ -0.27
TSPAN17-201ENST00000298564 SOCS3O14543 225 aa13.34□□□□□ -0.27
TSPAN17-201ENST00000298564 COX6B1P14854 86 aa13.34□□□□□ -0.27
TSPAN17-201ENST00000298564 ASIPP42127 132 aa13.34□□□□□ -0.27
TSPAN17-201ENST00000298564 TMEM95Q3KNT9 176 aa13.34□□□□□ -0.27
TSPAN17-201ENST00000298564 FAM74A4Q5TZK3 123 aa13.34□□□□□ -0.27
TSPAN17-201ENST00000298564 CD7P09564 240 aa13.34□□□□□ -0.27
TSPAN17-201ENST00000298564 EDN2P20800 178 aa13.34□□□□□ -0.27
TSPAN17-201ENST00000298564 NDUFA11Q86Y39 141 aa13.34□□□□□ -0.27
TSPAN17-201ENST00000298564 IGHV4-4A0A075B6R2 117 aa13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 BRI3O95415 125 aa13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 IGLV1-40P01703 118 aa13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 UBE2D1P51668 147 aa13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 Q6ZUT4 128 aa13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 OR10J6PQ8NGY7 276 aa13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 ZANQ9Y493 2812 aa13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 CFC1BP0CG36 223 aa13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 CFC1P0CG37 223 aa13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 TRPT1Q86TN4 253 aaKnown RBP13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 LINC00477Q96M19 166 aa13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 RHPN1-AS1Q9BWJ2 59 aa13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 ZNF256Q9Y2P7 627 aaPredicted RBP13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 ACACBO00763 2458 aa13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 MYO18BQ8IUG5 2567 aa13.33□□□□□ -0.28
TSPAN17-201ENST00000298564 IGLV4-69A0A075B6H9 119 aa13.32□□□□□ -0.28
TSPAN17-201ENST00000298564 A0A0J9YY99 117 aa13.32□□□□□ -0.28
TSPAN17-201ENST00000298564 TMEM238LA0A1B0GVL6 79 aa13.31□□□□□ -0.28
TSPAN17-201ENST00000298564 A6NJY4 79 aa13.31□□□□□ -0.28
TSPAN17-201ENST00000298564 IGKV3-20P01619 116 aa13.31□□□□□ -0.28
TSPAN17-201ENST00000298564 RNASE3P12724 160 aaKnown RBP13.31□□□□□ -0.28
TSPAN17-201ENST00000298564 RNF183Q96D59 192 aa13.31□□□□□ -0.28
TSPAN17-201ENST00000298564 ZNRF2Q8NHG8 242 aa13.31□□□□□ -0.28
TSPAN17-201ENST00000298564 LENEPQ9Y5L5 61 aa13.31□□□□□ -0.28
TSPAN17-201ENST00000298564 OVOL1O14753 267 aa13.31□□□□□ -0.28
TSPAN17-201ENST00000298564 IGHV4-59P01825 116 aa13.31□□□□□ -0.28
TSPAN17-201ENST00000298564 MAPK1IP1LQ8NDC0 245 aa13.31□□□□□ -0.28
TSPAN17-201ENST00000298564 BEX4Q9NWD9 120 aaPredicted RBP13.31□□□□□ -0.28
TSPAN17-201ENST00000298564 POLQO75417 2590 aa13.3□□□□□ -0.28
TSPAN17-201ENST00000298564 TRAV21A0A0B4J279 112 aa13.3□□□□□ -0.28
TSPAN17-201ENST00000298564 ANKRD29Q8N6D5 301 aa13.3□□□□□ -0.28
TSPAN17-201ENST00000298564 ZNF580Q9UK33 172 aa13.3□□□□□ -0.28
TSPAN17-201ENST00000298564 PRB1P04280 392 aa13.3□□□□□ -0.28
TSPAN17-201ENST00000298564 CFHR3Q02985 330 aa13.3□□□□□ -0.28
TSPAN17-201ENST00000298564 DEFB112Q30KQ8 113 aa13.3□□□□□ -0.28
TSPAN17-201ENST00000298564 DAZ1Q9NQZ3 744 aaKnown RBP13.29□□□□□ -0.28
TSPAN17-201ENST00000298564 ADARB2-AS1A8MUL3 147 aa13.29□□□□□ -0.28
TSPAN17-201ENST00000298564 UBE2D3P61077 147 aa13.29□□□□□ -0.28
TSPAN17-201ENST00000298564 UBE2D2P62837 147 aa13.29□□□□□ -0.28
TSPAN17-201ENST00000298564 C10orf99Q6UWK7 81 aa13.28□□□□□ -0.28
TSPAN17-201ENST00000298564 TCTEX1D4Q5JR98 221 aa13.28□□□□□ -0.28
TSPAN17-201ENST00000298564 FBN2P35556 2912 aa13.27□□□□□ -0.28
TSPAN17-201ENST00000298564 TRAV2A0A0B4J234 112 aa13.27□□□□□ -0.29
TSPAN17-201ENST00000298564 C9JAW5 83 aa13.27□□□□□ -0.29
TSPAN17-201ENST00000298564 IGHV3-30P01768 117 aa13.27□□□□□ -0.29
TSPAN17-201ENST00000298564 ELANEP08246 267 aa13.27□□□□□ -0.29
TSPAN17-201ENST00000298564 IGHV3-30-5P0DP03 117 aa13.27□□□□□ -0.29
TSPAN17-201ENST00000298564 DSCR9P59020 149 aa13.27□□□□□ -0.29
TSPAN17-201ENST00000298564 TEN1Q86WV5 123 aa13.27□□□□□ -0.29
TSPAN17-201ENST00000298564 SUMO4Q6EEV6 95 aa13.26□□□□□ -0.29
TSPAN17-201ENST00000298564 USP9YO00507 2555 aaPredicted RBP13.26□□□□□ -0.29
TSPAN17-201ENST00000298564 A8MWV9 139 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms