RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 RASL10AQ92737 203 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 SPXQ9BT56 116 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 JPT2Q9H910 190 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 IL36BQ9NZH7 164 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 NAT8Q9UHE5 227 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 V9GYV3 84 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 M0R2P5 195 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 TRIAP1O43715 76 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 P01737 135 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 ARMS2P0C7Q2 107 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 ASIPP42127 132 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 FOXI1Q12951 378 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 ADIRFQ15847 76 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 LGALS9BQ3B8N2 356 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 CASC10Q5T4H9 136 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 OR10AG1Q8NH19 301 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 PTH2Q96A98 100 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 ZNF479Q96JC4 524 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 C18orf15Q96N68 181 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 SAMD10Q9BYL1 202 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 RPP21Q9H633 154 aaKnown RBP4.13□□□□□ -1.75
SSX3-201ENST00000298396 OSTCQ9NRP0 149 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 DNAH10Q8IVF4 4471 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 DNAH2Q9P225 4427 aa4.13□□□□□ -1.75
SSX3-201ENST00000298396 TRAV10A0A0B4J240 114 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 TEX48A0A1B0GUV7 120 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 RS1O15537 224 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 GATCO43716 136 aaKnown RBP4.12□□□□□ -1.75
SSX3-201ENST00000298396 IGHV3-53P01767 116 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 OR5AL1P0C617 328 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 HTN3P15516 51 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 CTRLP40313 264 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 FHL2Q14192 279 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 ZNF876PQ49A33 203 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 CFAP126Q5VTH2 177 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 CEMP1Q6PRD7 247 aaPredicted RBP4.12□□□□□ -1.75
SSX3-201ENST00000298396 LYZL1Q6UWQ5 148 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 SLC7A5P1Q8MH63 180 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 DAZAP1Q96EP5 407 aaKnown RBP4.12□□□□□ -1.75
SSX3-201ENST00000298396 SFRP2Q96HF1 295 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 BIN3Q9NQY0 253 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 MSRB1Q9NZV6 116 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 DNAH17Q9UFH2 4485 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 RYR3Q15413 4870 aa4.12□□□□□ -1.75
SSX3-201ENST00000298396 TRGV2A0A075B6R0 118 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 DEFB131BA0A096LNP1 70 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 TRAV4A0A0B4J268 109 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 F5H697 171 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 C3orf84H3BNL1 204 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 M0R381 172 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 ATP5G1P05496 136 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 CRYGDP07320 174 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 S100A4P26447 101 aaKnown RBP4.11□□□□□ -1.75
SSX3-201ENST00000298396 LINC00315P59091 139 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 ERVFC1-1P60608 527 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 RNF212Q495C1 297 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 PIK3CD-AS1Q5SR53 167 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 TMEM88Q6PEY1 159 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 FER1L6-AS1Q8NA97 138 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 OR10G8Q8NGN5 311 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 TSKUQ8WUA8 353 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 VSIG2Q96IQ7 327 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 SEC11CQ9BY50 192 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 CNFNQ9BYD5 112 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 Q9UF83 564 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 APLNQ9ULZ1 77 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 CARHSP1Q9Y2V2 147 aaKnown RBP4.11□□□□□ -1.75
SSX3-201ENST00000298396 KIF25-AS1Q9Y6Z4 181 aa4.11□□□□□ -1.75
SSX3-201ENST00000298396 IGHV4-4A0A075B6R2 117 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 IGHV3-73A0A0B4J1V6 119 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 LOC100131303A0A0U1RQF7 123 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 SMIM27A0A1W2PRY6 76 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 NUPR2A6NF83 97 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 F5H768 121 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 F8W036 122 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 SLPIP03973 132 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 GATA1P15976 413 aaPredicted RBP4.1□□□□□ -1.75
SSX3-201ENST00000298396 BTF3P20290 206 aaKnown RBP4.1□□□□□ -1.75
SSX3-201ENST00000298396 FOXA3P55318 350 aaPredicted RBP4.1□□□□□ -1.75
SSX3-201ENST00000298396 RPS20P60866 119 aaKnown RBP4.1□□□□□ -1.75
SSX3-201ENST00000298396 ZFP82Q8N141 532 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 C14orf178Q8N769 122 aaPredicted RBP4.1□□□□□ -1.75
SSX3-201ENST00000298396 PGLYRP4Q96LB8 373 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 NDUFAF3Q9BU61 184 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 TPPP3Q9BW30 176 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 PHLDA3Q9Y5J5 127 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 HECTD4Q9Y4D8 3996 aa4.1□□□□□ -1.75
SSX3-201ENST00000298396 TRAV26-1A0A087WT03 109 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 A0A0J9YY99 117 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 A0A1W2PPQ1 181 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 HIGD1CA8MV81 97 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 A8MWL6 223 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 IGLL5B9A064 214 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 P0DMU3 169 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 FAM231AP0DMU4 169 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 FAM231CP0DMU5 169 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 LINC00694P0DN24 101 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 NTF3P20783 257 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 CRYBA4P53673 196 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 SSTP61278 116 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms