RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 TP53TG1Q9Y2A0 90 aa12.6□□□□□ -0.39
CHRNE-201ENST00000293780 RPL39P62891 51 aaKnown RBP12.59□□□□□ -0.39
CHRNE-201ENST00000293780 DCANP1Q8TF63 244 aa12.59□□□□□ -0.39
CHRNE-201ENST00000293780 A0A1B0GV72 72 aa12.59□□□□□ -0.39
CHRNE-201ENST00000293780 ZNF815PA8K554 130 aa12.59□□□□□ -0.39
CHRNE-201ENST00000293780 CD7P09564 240 aa12.59□□□□□ -0.39
CHRNE-201ENST00000293780 RRN3P1Q2M238 152 aa12.59□□□□□ -0.39
CHRNE-201ENST00000293780 C10orf99Q6UWK7 81 aa12.59□□□□□ -0.39
CHRNE-201ENST00000293780 TRBV7-9A0A0J9YWB2 115 aa12.58□□□□□ -0.4
CHRNE-201ENST00000293780 IGKV3-20P01619 116 aa12.58□□□□□ -0.4
CHRNE-201ENST00000293780 C11orf86A6NJI1 115 aa12.57□□□□□ -0.4
CHRNE-201ENST00000293780 F5H697 171 aa12.57□□□□□ -0.4
CHRNE-201ENST00000293780 PPP1R17O96001 155 aa12.57□□□□□ -0.4
CHRNE-201ENST00000293780 POLR2KP53803 58 aaKnown RBP12.57□□□□□ -0.4
CHRNE-201ENST00000293780 CFHR3Q02985 330 aa12.57□□□□□ -0.4
CHRNE-201ENST00000293780 SCGB2A2Q13296 93 aa12.57□□□□□ -0.4
CHRNE-201ENST00000293780 GAGE13Q4V321 117 aa12.57□□□□□ -0.4
CHRNE-201ENST00000293780 ZFP2Q6ZN57 461 aa12.57□□□□□ -0.4
CHRNE-201ENST00000293780 IGLV4-69A0A075B6H9 119 aa12.57□□□□□ -0.4
CHRNE-201ENST00000293780 IGHV4OR15-8A0A075B7B6 117 aa12.57□□□□□ -0.4
CHRNE-201ENST00000293780 A0A087WW49 117 aa12.57□□□□□ -0.4
CHRNE-201ENST00000293780 LINC01619G3V211 115 aa12.57□□□□□ -0.4
CHRNE-201ENST00000293780 ATP5J2P56134 94 aa12.57□□□□□ -0.4
CHRNE-201ENST00000293780 SORL1Q92673 2214 aa12.57□□□□□ -0.4
CHRNE-201ENST00000293780 TRAV12-2A0A075B6T6 113 aa12.56□□□□□ -0.4
CHRNE-201ENST00000293780 A0A1B0GWB2 263 aa12.56□□□□□ -0.4
CHRNE-201ENST00000293780 IGIPA6NJ69 53 aa12.56□□□□□ -0.4
CHRNE-201ENST00000293780 COX6B1P14854 86 aa12.56□□□□□ -0.4
CHRNE-201ENST00000293780 MORN3Q6PF18 240 aaPredicted RBP12.56□□□□□ -0.4
CHRNE-201ENST00000293780 NDUFS8O00217 210 aa12.56□□□□□ -0.4
CHRNE-201ENST00000293780 HOXA3O43365 443 aaPredicted RBP12.56□□□□□ -0.4
CHRNE-201ENST00000293780 ZNF688P0C7X2 276 aa12.56□□□□□ -0.4
CHRNE-201ENST00000293780 INSL3P51460 131 aa12.56□□□□□ -0.4
CHRNE-201ENST00000293780 SCGB1D4Q6XE38 83 aa12.56□□□□□ -0.4
CHRNE-201ENST00000293780 MSMBP08118 114 aa12.55□□□□□ -0.4
CHRNE-201ENST00000293780 ID1P41134 155 aa12.55□□□□□ -0.4
CHRNE-201ENST00000293780 FAM74A4Q5TZK3 123 aa12.55□□□□□ -0.4
CHRNE-201ENST00000293780 MDFICQ9P1T7 246 aa12.55□□□□□ -0.4
CHRNE-201ENST00000293780 PRO0461Q9UI25 63 aa12.55□□□□□ -0.4
CHRNE-201ENST00000293780 DOPEY2Q9Y3R5 2298 aa12.55□□□□□ -0.4
CHRNE-201ENST00000293780 SDHAF1A6NFY7 115 aa12.54□□□□□ -0.4
CHRNE-201ENST00000293780 K7EMT4 169 aa12.54□□□□□ -0.4
CHRNE-201ENST00000293780 VCYO14598 125 aa12.53□□□□□ -0.4
CHRNE-201ENST00000293780 SRSF9Q13242 221 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHRNE-201ENST00000293780 PGPEP1Q9NXJ5 209 aa12.53□□□□□ -0.4
CHRNE-201ENST00000293780 SFTA2Q6UW10 78 aa12.53□□□□□ -0.4
CHRNE-201ENST00000293780 ZNF256Q9Y2P7 627 aaPredicted RBP12.53□□□□□ -0.4
CHRNE-201ENST00000293780 RPL32P62910 135 aaKnown RBP12.52□□□□□ -0.4
CHRNE-201ENST00000293780 PMVKQ15126 192 aa12.52□□□□□ -0.4
CHRNE-201ENST00000293780 KIR2DL4Q99706 377 aa12.52□□□□□ -0.4
CHRNE-201ENST00000293780 UTP20O75691 2785 aaKnown RBP12.52□□□□□ -0.41
CHRNE-201ENST00000293780 IGHV3-16A0A0C4DH30 117 aa12.52□□□□□ -0.41
CHRNE-201ENST00000293780 PSMB8P28062 276 aa12.52□□□□□ -0.41
CHRNE-201ENST00000293780 ZNRF2Q8NHG8 242 aa12.52□□□□□ -0.41
CHRNE-201ENST00000293780 CLUHP3Q96NS8 147 aa12.52□□□□□ -0.41
CHRNE-201ENST00000293780 LINC01549A6NIU2 74 aa12.51□□□□□ -0.41
CHRNE-201ENST00000293780 IGHV4-59P01825 116 aa12.51□□□□□ -0.41
CHRNE-201ENST00000293780 TSPEAR-AS2P59090 65 aa12.51□□□□□ -0.41
CHRNE-201ENST00000293780 CKS1BP61024 79 aa12.51□□□□□ -0.41
CHRNE-201ENST00000293780 ZNF843Q8N446 348 aa12.51□□□□□ -0.41
CHRNE-201ENST00000293780 OPRPNQ99935 248 aaPredicted RBP12.51□□□□□ -0.41
CHRNE-201ENST00000293780 MRPL16Q9NX20 251 aaKnown RBP12.51□□□□□ -0.41
CHRNE-201ENST00000293780 FLNCQ14315 2725 aa12.51□□□□□ -0.41
CHRNE-201ENST00000293780 NRGNQ92686 78 aa12.51□□□□□ -0.41
CHRNE-201ENST00000293780 TMEM170BQ5T4T1 132 aa12.5□□□□□ -0.41
CHRNE-201ENST00000293780 Q8N1Y9 231 aa12.5□□□□□ -0.41
CHRNE-201ENST00000293780 C9orf85Q96MD7 179 aa12.5□□□□□ -0.41
CHRNE-201ENST00000293780 A0A0J9YX75 114 aa12.5□□□□□ -0.41
CHRNE-201ENST00000293780 LGALS9O00182 355 aa12.5□□□□□ -0.41
CHRNE-201ENST00000293780 APOMO95445 188 aa12.5□□□□□ -0.41
CHRNE-201ENST00000293780 A0A0J9YY99 117 aa12.49□□□□□ -0.41
CHRNE-201ENST00000293780 ZNF56Q15929 161 aa12.49□□□□□ -0.41
CHRNE-201ENST00000293780 SPINK13Q1W4C9 94 aa12.49□□□□□ -0.41
CHRNE-201ENST00000293780 DUX5Q96PT3 197 aa12.49□□□□□ -0.41
CHRNE-201ENST00000293780 TRBV27A0A0K0K1C4 114 aa12.49□□□□□ -0.41
CHRNE-201ENST00000293780 UBE2D1P51668 147 aa12.49□□□□□ -0.41
CHRNE-201ENST00000293780 DEFB112Q30KQ8 113 aa12.49□□□□□ -0.41
CHRNE-201ENST00000293780 TMEM141Q96I45 108 aa12.49□□□□□ -0.41
CHRNE-201ENST00000293780 ZNF462Q96JM2 2506 aa12.49□□□□□ -0.41
CHRNE-201ENST00000293780 M0QY20 66 aa12.48□□□□□ -0.41
CHRNE-201ENST00000293780 TIMM17AQ99595 171 aa12.48□□□□□ -0.41
CHRNE-201ENST00000293780 TSPAN13O95857 204 aa12.48□□□□□ -0.41
CHRNE-201ENST00000293780 HERVK_113P61574 105 aa12.48□□□□□ -0.41
CHRNE-201ENST00000293780 TCTEX1D4Q5JR98 221 aa12.48□□□□□ -0.41
CHRNE-201ENST00000293780 Q5PR19 223 aa12.48□□□□□ -0.41
CHRNE-201ENST00000293780 ZNF876PQ49A33 203 aa12.47□□□□□ -0.41
CHRNE-201ENST00000293780 PAPPA-AS1Q5QFB9 102 aa12.47□□□□□ -0.41
CHRNE-201ENST00000293780 ZANQ9Y493 2812 aa12.47□□□□□ -0.41
CHRNE-201ENST00000293780 TRBV6-5A0A0K0K1A5 114 aa12.47□□□□□ -0.41
CHRNE-201ENST00000293780 B4DSR2 109 aa12.47□□□□□ -0.41
CHRNE-201ENST00000293780 FOXI1Q12951 378 aa12.47□□□□□ -0.41
CHRNE-201ENST00000293780 TMEM238LA0A1B0GVL6 79 aa12.46□□□□□ -0.41
CHRNE-201ENST00000293780 A6NJY4 79 aa12.46□□□□□ -0.41
CHRNE-201ENST00000293780 K7EQG2 157 aa12.46□□□□□ -0.41
CHRNE-201ENST00000293780 SYNJ2BPP57105 145 aa12.46□□□□□ -0.41
CHRNE-201ENST00000293780 USP9XQ93008 2570 aaPredicted RBP12.46□□□□□ -0.41
CHRNE-201ENST00000293780 IGHV1OR15-1A0A075B7D0 117 aa12.46□□□□□ -0.42
CHRNE-201ENST00000293780 LOC107984156A0A0G2JMH3 177 aa12.46□□□□□ -0.42
CHRNE-201ENST00000293780 P0DMU3 169 aa12.46□□□□□ -0.42
CHRNE-201ENST00000293780 FAM231AP0DMU4 169 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms