RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 HBDP02042 147 aa12.21□□□□□ -0.45
HIF3A-203ENST00000291300 NXT2Q9NPJ8 142 aaKnown RBP12.21□□□□□ -0.45
HIF3A-203ENST00000291300 HSPB8Q9UJY1 196 aa12.21□□□□□ -0.45
HIF3A-203ENST00000291300 FAM74A4Q5TZK3 123 aa12.2□□□□□ -0.46
HIF3A-203ENST00000291300 TRPT1Q86TN4 253 aaKnown RBP12.2□□□□□ -0.46
HIF3A-203ENST00000291300 POM121L12Q8N7R1 296 aa12.2□□□□□ -0.46
HIF3A-203ENST00000291300 LINC00482Q8N8I6 264 aa12.2□□□□□ -0.46
HIF3A-203ENST00000291300 DEFB104AQ8WTQ1 72 aa12.2□□□□□ -0.46
HIF3A-203ENST00000291300 MAP1LC3CQ9BXW4 147 aa12.2□□□□□ -0.46
HIF3A-203ENST00000291300 C19orf73Q9NVV2 129 aa12.2□□□□□ -0.46
HIF3A-203ENST00000291300 PRSS47A8MTI9 375 aa12.2□□□□□ -0.46
HIF3A-203ENST00000291300 SUMO4Q6EEV6 95 aa12.2□□□□□ -0.46
HIF3A-203ENST00000291300 STHQ8IWL8 128 aa12.2□□□□□ -0.46
HIF3A-203ENST00000291300 ATRQ13535 2644 aa12.2□□□□□ -0.46
HIF3A-203ENST00000291300 CRYGDP07320 174 aa12.19□□□□□ -0.46
HIF3A-203ENST00000291300 SPATA45Q537H7 98 aa12.19□□□□□ -0.46
HIF3A-203ENST00000291300 C18orf15Q96N68 181 aa12.19□□□□□ -0.46
HIF3A-203ENST00000291300 NOTCH3Q9UM47 2321 aa12.19□□□□□ -0.46
HIF3A-203ENST00000291300 ZNF876PQ49A33 203 aa12.19□□□□□ -0.46
HIF3A-203ENST00000291300 NEGR1Q7Z3B1 354 aa12.19□□□□□ -0.46
HIF3A-203ENST00000291300 DEFB125Q8N687 156 aa12.19□□□□□ -0.46
HIF3A-203ENST00000291300 TMEM158Q8WZ71 300 aa12.19□□□□□ -0.46
HIF3A-203ENST00000291300 LINC01587Q99440 93 aa12.19□□□□□ -0.46
HIF3A-203ENST00000291300 TRGV11A0A075B6L2 103 aa12.18□□□□□ -0.46
HIF3A-203ENST00000291300 CYSRT1A8MQ03 144 aa12.18□□□□□ -0.46
HIF3A-203ENST00000291300 PF4P02776 101 aa12.18□□□□□ -0.46
HIF3A-203ENST00000291300 BEAN1Q3B7T3 259 aa12.18□□□□□ -0.46
HIF3A-203ENST00000291300 C14orf144Q96I85 54 aa12.18□□□□□ -0.46
HIF3A-203ENST00000291300 C20orf144Q9BQM9 153 aa12.18□□□□□ -0.46
HIF3A-203ENST00000291300 GIG44P09565 113 aaPredicted RBP12.17□□□□□ -0.46
HIF3A-203ENST00000291300 AZU1P20160 251 aa12.17□□□□□ -0.46
HIF3A-203ENST00000291300 SUMO2P61956 95 aaKnown RBP12.17□□□□□ -0.46
HIF3A-203ENST00000291300 C1orf158Q8N1D5 194 aa12.17□□□□□ -0.46
HIF3A-203ENST00000291300 SMIM2Q9BVW6 85 aa12.17□□□□□ -0.46
HIF3A-203ENST00000291300 SMIM17P0DL12 118 aa12.17□□□□□ -0.46
HIF3A-203ENST00000291300 FCER1GP30273 86 aa12.17□□□□□ -0.46
HIF3A-203ENST00000291300 PET117Q6UWS5 81 aa12.17□□□□□ -0.46
HIF3A-203ENST00000291300 TEP1Q99973 2627 aaKnown RBP12.16□□□□□ -0.46
HIF3A-203ENST00000291300 TRRAPQ9Y4A5 3859 aa12.16□□□□□ -0.46
HIF3A-203ENST00000291300 NACAE9PAV3 2078 aa12.16□□□□□ -0.46
HIF3A-203ENST00000291300 IGHV3OR16-12A0A075B7B8 117 aa12.16□□□□□ -0.46
HIF3A-203ENST00000291300 hDV102S1A0JD36 115 aa12.16□□□□□ -0.46
HIF3A-203ENST00000291300 F5H697 171 aa12.16□□□□□ -0.46
HIF3A-203ENST00000291300 INSP01308 110 aa12.16□□□□□ -0.46
HIF3A-203ENST00000291300 LINC01545Q5VT33 79 aa12.16□□□□□ -0.46
HIF3A-203ENST00000291300 MORN3Q6PF18 240 aaPredicted RBP12.16□□□□□ -0.46
HIF3A-203ENST00000291300 C11orf72Q8NBR9 251 aa12.16□□□□□ -0.46
HIF3A-203ENST00000291300 CLUHP3Q96NS8 147 aa12.16□□□□□ -0.46
HIF3A-203ENST00000291300 IGLL1P15814 213 aa12.16□□□□□ -0.46
HIF3A-203ENST00000291300 ZNF705AQ6ZN79 300 aaPredicted RBP12.16□□□□□ -0.46
HIF3A-203ENST00000291300 TP73-AS1Q9UF72 201 aa12.16□□□□□ -0.46
HIF3A-203ENST00000291300 SYT8Q8NBV8 401 aa12.15□□□□□ -0.46
HIF3A-203ENST00000291300 IFI27L1Q96BM0 104 aa12.15□□□□□ -0.46
HIF3A-203ENST00000291300 TRAV9-2A0A087WT02 112 aa12.14□□□□□ -0.47
HIF3A-203ENST00000291300 IGHV3-73A0A0B4J1V6 119 aa12.14□□□□□ -0.47
HIF3A-203ENST00000291300 RPL35AP18077 110 aaKnown RBP12.14□□□□□ -0.47
HIF3A-203ENST00000291300 LAGE3Q14657 143 aa12.14□□□□□ -0.47
HIF3A-203ENST00000291300 NDUFAF3Q9BU61 184 aa12.14□□□□□ -0.47
HIF3A-203ENST00000291300 DEFA6Q01524 100 aa12.14□□□□□ -0.47
HIF3A-203ENST00000291300 C20orf78Q9BR46 151 aa12.14□□□□□ -0.47
HIF3A-203ENST00000291300 CSTL1Q9H114 145 aa12.14□□□□□ -0.47
HIF3A-203ENST00000291300 ZNF56Q15929 161 aa12.13□□□□□ -0.47
HIF3A-203ENST00000291300 M0QY20 66 aa12.12□□□□□ -0.47
HIF3A-203ENST00000291300 MIEN1Q9BRT3 115 aa12.12□□□□□ -0.47
HIF3A-203ENST00000291300 MRPL16Q9NX20 251 aaKnown RBP12.12□□□□□ -0.47
HIF3A-203ENST00000291300 IGLC3P0DOY3 106 aa12.11□□□□□ -0.47
HIF3A-203ENST00000291300 CITED1Q99966 193 aa12.11□□□□□ -0.47
HIF3A-203ENST00000291300 LINC00467Q9BRT7 94 aa12.11□□□□□ -0.47
HIF3A-203ENST00000291300 TMEM208Q9BTX3 173 aa12.11□□□□□ -0.47
HIF3A-203ENST00000291300 DKK2Q9UBU2 259 aa12.11□□□□□ -0.47
HIF3A-203ENST00000291300 Q9UF83 564 aa12.11□□□□□ -0.47
HIF3A-203ENST00000291300 BAHCC1Q9P281 2608 aa12.11□□□□□ -0.47
HIF3A-203ENST00000291300 C20orf202A1L168 122 aa12.11□□□□□ -0.47
HIF3A-203ENST00000291300 NUDT3O95989 172 aa12.11□□□□□ -0.47
HIF3A-203ENST00000291300 ZNF415Q09FC8 603 aa12.11□□□□□ -0.47
HIF3A-203ENST00000291300 Q6ZSN1 163 aa12.11□□□□□ -0.47
HIF3A-203ENST00000291300 M0R2P5 195 aa12.1□□□□□ -0.47
HIF3A-203ENST00000291300 P0DMU3 169 aa12.1□□□□□ -0.47
HIF3A-203ENST00000291300 FAM231AP0DMU4 169 aa12.1□□□□□ -0.47
HIF3A-203ENST00000291300 FAM231CP0DMU5 169 aa12.1□□□□□ -0.47
HIF3A-203ENST00000291300 POLR2KP53803 58 aaKnown RBP12.1□□□□□ -0.47
HIF3A-203ENST00000291300 ST20Q9HBF5 79 aa12.1□□□□□ -0.47
HIF3A-203ENST00000291300 UFSP1Q6NVU6 142 aa12.1□□□□□ -0.47
HIF3A-203ENST00000291300 FAM110AQ9BQ89 295 aa12.08□□□□□ -0.47
HIF3A-203ENST00000291300 SDHAF1A6NFY7 115 aa12.08□□□□□ -0.48
HIF3A-203ENST00000291300 EREGO14944 169 aa12.08□□□□□ -0.48
HIF3A-203ENST00000291300 TCTAP57738 103 aa12.08□□□□□ -0.48
HIF3A-203ENST00000291300 LGALS9BQ3B8N2 356 aa12.08□□□□□ -0.48
HIF3A-203ENST00000291300 LGALS9CQ6DKI2 356 aa12.08□□□□□ -0.48
HIF3A-203ENST00000291300 NUTF2P61970 127 aaKnown RBP12.07□□□□□ -0.48
HIF3A-203ENST00000291300 CFAP126Q5VTH2 177 aa12.07□□□□□ -0.48
HIF3A-203ENST00000291300 GOLT1BQ9Y3E0 138 aa12.07□□□□□ -0.48
HIF3A-203ENST00000291300 CMC4P56277 68 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-203ENST00000291300 CSNK1G2-AS1Q8NCQ2 148 aa12.07□□□□□ -0.48
HIF3A-203ENST00000291300 RNASE8Q8TDE3 154 aaKnown RBP12.07□□□□□ -0.48
HIF3A-203ENST00000291300 PPP1R17O96001 155 aa12.06□□□□□ -0.48
HIF3A-203ENST00000291300 ODF1Q14990 250 aa12.06□□□□□ -0.48
HIF3A-203ENST00000291300 IL17DQ8TAD2 202 aa12.06□□□□□ -0.48
HIF3A-203ENST00000291300 TRBV6-5A0A0K0K1A5 114 aa12.05□□□□□ -0.48
HIF3A-203ENST00000291300 PRSS1P07477 247 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms