RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 LINC00587B1AMM8 73 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 HBDP02042 147 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 FABP2P12104 132 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 PFN2P35080 140 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 MRPL53Q96EL3 112 aaKnown RBP6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 CMYA5Q8N3K9 4069 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 A0A1W2PRE2 83 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 FAM90A2PQ658T7 463 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 TMEM256Q8N2U0 113 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 LINC00479Q96M42 142 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 MRPL16Q9NX20 251 aaKnown RBP6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 IGLV10-54A0A075B6I4 117 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 SMIM6P0DI80 62 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 INSL3P51460 131 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 CTAG1AP78358 180 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 MORN5Q5VZ52 161 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 FAM110AQ9BQ89 295 aa6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 MRPS16Q9Y3D3 137 aaKnown RBP6.37□□□□□ -1.39
PTPDC1-201ENST00000288976 C8orf49Q96NF6 230 aa6.36□□□□□ -1.39
PTPDC1-201ENST00000288976 TRBV19A0A075B6N1 114 aa6.36□□□□□ -1.39
PTPDC1-201ENST00000288976 GSN-AS1Q9NRJ2 163 aa6.36□□□□□ -1.39
PTPDC1-201ENST00000288976 GATD1Q8NB37 220 aa6.36□□□□□ -1.39
PTPDC1-201ENST00000288976 FMC1Q96HJ9 113 aa6.36□□□□□ -1.39
PTPDC1-201ENST00000288976 CDK2AP2O75956 126 aa6.35□□□□□ -1.39
PTPDC1-201ENST00000288976 LINC00614P0C842 121 aa6.35□□□□□ -1.39
PTPDC1-201ENST00000288976 SOCS3O14543 225 aa6.35□□□□□ -1.39
PTPDC1-201ENST00000288976 WIPF1O43516 503 aa6.35□□□□□ -1.39
PTPDC1-201ENST00000288976 RNF183Q96D59 192 aa6.35□□□□□ -1.39
PTPDC1-201ENST00000288976 SMKR1H3BMG3 65 aa6.34□□□□□ -1.39
PTPDC1-201ENST00000288976 IGHV3-30P01768 117 aa6.34□□□□□ -1.39
PTPDC1-201ENST00000288976 IGHV3-33P01772 117 aa6.34□□□□□ -1.39
PTPDC1-201ENST00000288976 IGHV3-30-3P0DP02 117 aa6.34□□□□□ -1.39
PTPDC1-201ENST00000288976 IGHV3-30-5P0DP03 117 aa6.34□□□□□ -1.39
PTPDC1-201ENST00000288976 SS18Q15532 418 aa6.34□□□□□ -1.39
PTPDC1-201ENST00000288976 ADAMTSL5Q6ZMM2 481 aa6.34□□□□□ -1.39
PTPDC1-201ENST00000288976 WFDC9Q8NEX5 89 aa6.34□□□□□ -1.39
PTPDC1-201ENST00000288976 TYMSP04818 313 aa6.34□□□□□ -1.39
PTPDC1-201ENST00000288976 C17orf77Q96MU5 243 aa6.34□□□□□ -1.39
PTPDC1-201ENST00000288976 TRBV6-1A0A0K0K1D8 114 aa6.34□□□□□ -1.4
PTPDC1-201ENST00000288976 RBMY1BA6NDE4 496 aaKnown RBP6.34□□□□□ -1.4
PTPDC1-201ENST00000288976 RBMY1EA6NEQ0 496 aaKnown RBP6.34□□□□□ -1.4
PTPDC1-201ENST00000288976 RBMY1DP0C7P1 496 aaKnown RBP6.34□□□□□ -1.4
PTPDC1-201ENST00000288976 RBMY1A1P0DJD3 496 aaKnown RBP6.34□□□□□ -1.4
PTPDC1-201ENST00000288976 RBMY1CP0DJD4 496 aa6.34□□□□□ -1.4
PTPDC1-201ENST00000288976 CDKN1BP46527 198 aa6.34□□□□□ -1.4
PTPDC1-201ENST00000288976 CCL20P78556 96 aa6.34□□□□□ -1.4
PTPDC1-201ENST00000288976 LYZL1Q6UWQ5 148 aa6.34□□□□□ -1.4
PTPDC1-201ENST00000288976 OCC1Q8TAD7 63 aa6.34□□□□□ -1.4
PTPDC1-201ENST00000288976 C11orf52Q96A22 123 aa6.34□□□□□ -1.4
PTPDC1-201ENST00000288976 TMEM126AQ9H061 195 aa6.34□□□□□ -1.4
PTPDC1-201ENST00000288976 IGLV2-18A0A075B6J9 118 aa6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 RBAKDNA6NC62 111 aa6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 M0R2N4 97 aa6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 TSPAN13O95857 204 aa6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 C14orf144Q96I85 54 aa6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 SPXQ9BT56 116 aa6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 IGLV1-51P01701 117 aa6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 SPART-AS1P0CW21 52 aa6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 DEFB114Q30KQ6 69 aa6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 SPAG8Q99932 426 aaPredicted RBP6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 IGLL1P15814 213 aa6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 HLA-DMBP28068 263 aa6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 C1orf43Q9BWL3 253 aa6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 CSTL1Q9H114 145 aa6.33□□□□□ -1.4
PTPDC1-201ENST00000288976 DEFB1P60022 68 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 RNASE13Q5GAN3 156 aaKnown RBP6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 NEGR1Q7Z3B1 354 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 DCANP1Q8TF63 244 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 TIMM17AQ99595 171 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 KLK5Q9Y337 293 aaPredicted RBP6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 C21orf62-AS1Q17RA5 79 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 OXLD1Q5BKU9 147 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 COPS9Q8WXC6 57 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 F8WEM9 126 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 NKAPP1Q8N9T2 125 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 DERL1Q9BUN8 251 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 IL36BQ9NZH7 164 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 DNAH3Q8TD57 4116 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 XCL1P47992 114 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 PMCHL1Q16048 86 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 TEX43Q6ZNM6 134 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 DEFB125Q8N687 156 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 MS4A6AQ9H2W1 248 aa6.32□□□□□ -1.4
PTPDC1-201ENST00000288976 TRAV8-2A0A0B4J237 113 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 GGTLC3B5MD39 225 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 K7EQG2 157 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 TMEM75Q8N9X5 138 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 EDA2RQ9HAV5 297 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 TRBV25-1A0A075B6N4 114 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 IGHV1OR15-1A0A075B7D0 117 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 LY6G6CO95867 125 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 SLC25A34Q6PIV7 304 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 LAMTOR3Q9UHA4 124 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 PRSS29PA6NIE9 313 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 EDN2P20800 178 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 PLNP26678 52 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 STAB2Q8WWQ8 2551 aa6.31□□□□□ -1.4
PTPDC1-201ENST00000288976 SH2D1AO60880 128 aa6.3□□□□□ -1.4
PTPDC1-201ENST00000288976 Q6AWC8 147 aa6.3□□□□□ -1.4
PTPDC1-201ENST00000288976 SRP19P09132 144 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms