RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 C14orf178Q8N769 122 aaPredicted RBP9.33□□□□□ -0.92
TPM1-202ENST00000288398 SAMD10Q9BYL1 202 aa9.33□□□□□ -0.92
TPM1-202ENST00000288398 JPT2Q9H910 190 aa9.33□□□□□ -0.92
TPM1-202ENST00000288398 A0A087WWL8 130 aa9.32□□□□□ -0.92
TPM1-202ENST00000288398 MAP1LC3B2A6NCE7 125 aa9.32□□□□□ -0.92
TPM1-202ENST00000288398 RBFOX3A6NFN3 312 aa9.32□□□□□ -0.92
TPM1-202ENST00000288398 KRBOX1C9JBD0 128 aa9.32□□□□□ -0.92
TPM1-202ENST00000288398 LINC00694P0DN24 101 aa9.32□□□□□ -0.92
TPM1-202ENST00000288398 RPL36AP83881 106 aaKnown RBP9.32□□□□□ -0.92
TPM1-202ENST00000288398 ZNF726P1Q15940 193 aa9.32□□□□□ -0.92
TPM1-202ENST00000288398 Q5BKY6 102 aa9.32□□□□□ -0.92
TPM1-202ENST00000288398 CST9LP1Q5W188 147 aa9.32□□□□□ -0.92
TPM1-202ENST00000288398 ZFP82Q8N141 532 aa9.32□□□□□ -0.92
TPM1-202ENST00000288398 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.32□□□□□ -0.92
TPM1-202ENST00000288398 BAALCQ8WXS3 180 aa9.32□□□□□ -0.92
TPM1-202ENST00000288398 RPL36ALQ969Q0 106 aaKnown RBP9.32□□□□□ -0.92
TPM1-202ENST00000288398 ZC2HC1AQ96GY0 325 aa9.32□□□□□ -0.92
TPM1-202ENST00000288398 TCEAL7Q9BRU2 100 aa9.32□□□□□ -0.92
TPM1-202ENST00000288398 MAP1LC3BQ9GZQ8 125 aa9.32□□□□□ -0.92
TPM1-202ENST00000288398 SRRM2Q9UQ35 2752 aaKnown RBP9.32□□□□□ -0.92
TPM1-202ENST00000288398 TMSB15BA0A087X1C1 80 aa9.31□□□□□ -0.92
TPM1-202ENST00000288398 RNF222A6NCQ9 220 aa9.31□□□□□ -0.92
TPM1-202ENST00000288398 AKR1C3P42330 323 aa9.31□□□□□ -0.92
TPM1-202ENST00000288398 DNLZQ5SXM8 178 aa9.31□□□□□ -0.92
TPM1-202ENST00000288398 Q8N976 141 aa9.31□□□□□ -0.92
TPM1-202ENST00000288398 UFSP1Q6NVU6 142 aa9.3□□□□□ -0.92
TPM1-202ENST00000288398 UBE2WQ96B02 151 aa9.3□□□□□ -0.92
TPM1-202ENST00000288398 SFRP2Q96HF1 295 aa9.3□□□□□ -0.92
TPM1-202ENST00000288398 FAM30AQ9NZY2 134 aa9.3□□□□□ -0.92
TPM1-202ENST00000288398 KLK12Q9UKR0 248 aa9.3□□□□□ -0.92
TPM1-202ENST00000288398 FAT1Q14517 4588 aa9.29□□□□□ -0.92
TPM1-202ENST00000288398 HERC1Q15751 4861 aa9.29□□□□□ -0.92
TPM1-202ENST00000288398 TRBV10-1A0A0K0K1A3 114 aa9.29□□□□□ -0.92
TPM1-202ENST00000288398 TMEM262E9PQX1 116 aa9.29□□□□□ -0.92
TPM1-202ENST00000288398 ARPC5O15511 151 aa9.29□□□□□ -0.92
TPM1-202ENST00000288398 CRPP02741 224 aa9.29□□□□□ -0.92
TPM1-202ENST00000288398 WFDC2Q14508 124 aa9.29□□□□□ -0.92
TPM1-202ENST00000288398 NIT1Q86X76 327 aa9.29□□□□□ -0.92
TPM1-202ENST00000288398 LINC00528Q8N1L1 170 aa9.29□□□□□ -0.92
TPM1-202ENST00000288398 CHCHD7Q9BUK0 85 aa9.29□□□□□ -0.92
TPM1-202ENST00000288398 PFDN1O60925 122 aa9.28□□□□□ -0.92
TPM1-202ENST00000288398 FHITP49789 147 aa9.28□□□□□ -0.92
TPM1-202ENST00000288398 CRIP1P50238 77 aa9.28□□□□□ -0.92
TPM1-202ENST00000288398 Q0VG73 95 aa9.28□□□□□ -0.92
TPM1-202ENST00000288398 ZNF56Q15929 161 aa9.28□□□□□ -0.92
TPM1-202ENST00000288398 LINC01559Q495D7 138 aa9.28□□□□□ -0.92
TPM1-202ENST00000288398 COX8CQ7Z4L0 72 aa9.28□□□□□ -0.92
TPM1-202ENST00000288398 Q9UF83 564 aa9.28□□□□□ -0.92
TPM1-202ENST00000288398 FLG2Q5D862 2391 aaPredicted RBP9.27□□□□□ -0.93
TPM1-202ENST00000288398 TRBV7-3A0A075B6L6 115 aa9.27□□□□□ -0.93
TPM1-202ENST00000288398 TRBV6-1A0A0K0K1D8 114 aa9.27□□□□□ -0.93
TPM1-202ENST00000288398 LTAP01374 205 aa9.27□□□□□ -0.93
TPM1-202ENST00000288398 S100A9P06702 114 aaKnown RBP9.27□□□□□ -0.93
TPM1-202ENST00000288398 ZNF674Q2M3X9 581 aa9.27□□□□□ -0.93
TPM1-202ENST00000288398 C14orf177Q52M58 125 aa9.27□□□□□ -0.93
TPM1-202ENST00000288398 PKIAP61925 76 aa9.26□□□□□ -0.93
TPM1-202ENST00000288398 Q6ZSA8 131 aa9.26□□□□□ -0.93
TPM1-202ENST00000288398 DEFB104AQ8WTQ1 72 aa9.26□□□□□ -0.93
TPM1-202ENST00000288398 C1orf43Q9BWL3 253 aa9.26□□□□□ -0.93
TPM1-202ENST00000288398 ZNF471Q9BX82 626 aaPredicted RBP9.26□□□□□ -0.93
TPM1-202ENST00000288398 VPS13BQ7Z7G8 4022 aa9.26□□□□□ -0.93
TPM1-202ENST00000288398 F5H697 171 aa9.25□□□□□ -0.93
TPM1-202ENST00000288398 PAGE4O60829 102 aa9.25□□□□□ -0.93
TPM1-202ENST00000288398 RAB4BP61018 213 aa9.25□□□□□ -0.93
TPM1-202ENST00000288398 UBE2D3P61077 147 aa9.25□□□□□ -0.93
TPM1-202ENST00000288398 UBE2D2P62837 147 aa9.25□□□□□ -0.93
TPM1-202ENST00000288398 SPANXN1Q5VSR9 72 aa9.25□□□□□ -0.93
TPM1-202ENST00000288398 SFT2D1Q8WV19 159 aa9.25□□□□□ -0.93
TPM1-202ENST00000288398 SMIM17P0DL12 118 aa9.24□□□□□ -0.93
TPM1-202ENST00000288398 LINC01620Q4KN68 170 aa9.24□□□□□ -0.93
TPM1-202ENST00000288398 C15orf54Q8N8G6 183 aa9.24□□□□□ -0.93
TPM1-202ENST00000288398 FAM213BQ8TBF2 198 aa9.24□□□□□ -0.93
TPM1-202ENST00000288398 CHCHD5Q9BSY4 110 aa9.24□□□□□ -0.93
TPM1-202ENST00000288398 TRBV6-8A0A0A6YYG3 113 aa9.23□□□□□ -0.93
TPM1-202ENST00000288398 A0A1B0GV50 99 aa9.23□□□□□ -0.93
TPM1-202ENST00000288398 UMAD1C9J7I0 102 aa9.23□□□□□ -0.93
TPM1-202ENST00000288398 ANGP03950 147 aaKnown RBP9.23□□□□□ -0.93
TPM1-202ENST00000288398 PRR27Q6MZM9 219 aa9.23□□□□□ -0.93
TPM1-202ENST00000288398 SCXQ7RTU7 201 aa9.23□□□□□ -0.93
TPM1-202ENST00000288398 BAGE2Q86Y30 109 aa9.23□□□□□ -0.93
TPM1-202ENST00000288398 MYCBP2O75592 4640 aa9.22□□□□□ -0.93
TPM1-202ENST00000288398 CXCL1P09341 107 aa9.22□□□□□ -0.93
TPM1-202ENST00000288398 TMEM97Q5BJF2 176 aa9.22□□□□□ -0.93
TPM1-202ENST00000288398 OR10G8Q8NGN5 311 aa9.22□□□□□ -0.93
TPM1-202ENST00000288398 OR10AG1Q8NH19 301 aa9.22□□□□□ -0.93
TPM1-202ENST00000288398 CHAC1Q9BUX1 264 aa9.22□□□□□ -0.93
TPM1-202ENST00000288398 CYTL1Q9NRR1 136 aa9.22□□□□□ -0.93
TPM1-202ENST00000288398 SCO2A0A1W2PP80 73 aa9.21□□□□□ -0.94
TPM1-202ENST00000288398 KANTRA0A1W2PQU2 76 aa9.21□□□□□ -0.94
TPM1-202ENST00000288398 HLA-DQA1P01909 254 aa9.21□□□□□ -0.94
TPM1-202ENST00000288398 SSTP61278 116 aa9.21□□□□□ -0.94
TPM1-202ENST00000288398 RPL19P84098 196 aaKnown RBP9.21□□□□□ -0.94
TPM1-202ENST00000288398 DNAJC30Q96LL9 226 aa9.21□□□□□ -0.94
TPM1-202ENST00000288398 EIF5AP63241 154 aaKnown RBP9.2□□□□□ -0.94
TPM1-202ENST00000288398 ATRAIDQ6UW56 229 aa9.2□□□□□ -0.94
TPM1-202ENST00000288398 KCNRGQ8N5I3 272 aa9.2□□□□□ -0.94
TPM1-202ENST00000288398 NEXN-AS1Q8NBZ9 246 aa9.2□□□□□ -0.94
TPM1-202ENST00000288398 AP1S3Q96PC3 154 aa9.2□□□□□ -0.94
TPM1-202ENST00000288398 MUC21A0A0G2JKD1 596 aa9.19□□□□□ -0.94
TPM1-202ENST00000288398 MUC21A0A140T8X8 626 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms