RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SAMD10Q9BYL1 202 aa6.27□□□□□ -1.41
HMGN1-201ENST00000288344 JPT2Q9H910 190 aa6.27□□□□□ -1.41
HMGN1-201ENST00000288344 MRPS16Q9Y3D3 137 aaKnown RBP6.27□□□□□ -1.41
HMGN1-201ENST00000288344 TRBV6-4A0A1B0GX49 114 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 RAB19A4D1S5 217 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 B4DEV8 164 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 SNAI2O43623 268 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 CRYGDP07320 174 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 ARMS2P0C7Q2 107 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 UBE2G1P62253 170 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 ZFP2Q6ZN57 461 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 SLC25A29Q8N8R3 303 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 NHLRC2Q8NBF2 726 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 OR4C5Q8NGB2 326 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 SMIM12Q96EX1 92 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 Q9H8V8 135 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 VAX2Q9UIW0 290 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 DNAH8Q96JB1 4490 aa6.26□□□□□ -1.41
HMGN1-201ENST00000288344 LOC100131303A0A0U1RQF7 123 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 NBDYA0A0U1RRE5 68 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 GRIFINA4D1Z8 144 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 M0R2N4 97 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 PDE6DO43924 150 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 ORM1P02763 201 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 CCL18P55774 89 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 TIRAPP58753 221 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 LINC00315P59091 139 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 RPL19P84098 196 aaKnown RBP6.25□□□□□ -1.41
HMGN1-201ENST00000288344 PARLQ9H300 379 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 KIF25-AS1Q9Y6Z4 181 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 IGLV2-18A0A075B6J9 118 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 B5MCH6 92 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 C9JCJ5 164 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 M0R036 132 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 OR5AL1P0C617 328 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 IGLC6P0CF74 106 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 TAGLN2P37802 199 aaKnown RBP6.25□□□□□ -1.41
HMGN1-201ENST00000288344 ASIPP42127 132 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 PTTG1IPP53801 180 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 BLOC1S1P78537 153 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 MRPL23Q16540 153 aaKnown RBP6.25□□□□□ -1.41
HMGN1-201ENST00000288344 CENPWQ5EE01 88 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 SYT8Q8NBV8 401 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 SFRP2Q96HF1 295 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 ICOSQ9Y6W8 199 aa6.25□□□□□ -1.41
HMGN1-201ENST00000288344 RYR1P21817 5038 aa6.24□□□□□ -1.41
HMGN1-201ENST00000288344 TRGV4A0A0C4DH28 118 aa6.24□□□□□ -1.41
HMGN1-201ENST00000288344 RBFOX3A6NFN3 312 aa6.24□□□□□ -1.41
HMGN1-201ENST00000288344 A8MWV9 139 aa6.24□□□□□ -1.41
HMGN1-201ENST00000288344 TEX46H3BTG2 121 aa6.24□□□□□ -1.41
HMGN1-201ENST00000288344 H3BVH4 76 aa6.24□□□□□ -1.41
HMGN1-201ENST00000288344 K7EN84 100 aa6.24□□□□□ -1.41
HMGN1-201ENST00000288344 Q6ZRN7 208 aaPredicted RBP6.24□□□□□ -1.41
HMGN1-201ENST00000288344 NEGR1Q7Z3B1 354 aa6.24□□□□□ -1.41
HMGN1-201ENST00000288344 OCC1Q8TAD7 63 aa6.24□□□□□ -1.41
HMGN1-201ENST00000288344 A0A1W2PPQ1 181 aa6.23□□□□□ -1.41
HMGN1-201ENST00000288344 C9JQL5 133 aa6.23□□□□□ -1.41
HMGN1-201ENST00000288344 TMEM250H0YL14 139 aa6.23□□□□□ -1.41
HMGN1-201ENST00000288344 PRR27Q6MZM9 219 aa6.23□□□□□ -1.41
HMGN1-201ENST00000288344 TEX261Q6UWH6 196 aa6.23□□□□□ -1.41
HMGN1-201ENST00000288344 LINC00336Q6ZUF6 198 aa6.23□□□□□ -1.41
HMGN1-201ENST00000288344 MED9Q9NWA0 146 aa6.23□□□□□ -1.41
HMGN1-201ENST00000288344 A0A087WWL8 130 aa6.22□□□□□ -1.41
HMGN1-201ENST00000288344 TMSB15BA0A087X1C1 80 aa6.22□□□□□ -1.41
HMGN1-201ENST00000288344 IFNA1P01562 189 aa6.22□□□□□ -1.41
HMGN1-201ENST00000288344 MGST1P10620 155 aaKnown RBP6.22□□□□□ -1.41
HMGN1-201ENST00000288344 BTF3P20290 206 aaKnown RBP6.22□□□□□ -1.41
HMGN1-201ENST00000288344 S100A4P26447 101 aaKnown RBP6.22□□□□□ -1.41
HMGN1-201ENST00000288344 LCE1DQ5T752 114 aa6.22□□□□□ -1.41
HMGN1-201ENST00000288344 UBE2DNLQ8IWF7 75 aa6.22□□□□□ -1.41
HMGN1-201ENST00000288344 C14orf178Q8N769 122 aaPredicted RBP6.22□□□□□ -1.41
HMGN1-201ENST00000288344 OR10AG1Q8NH19 301 aa6.22□□□□□ -1.41
HMGN1-201ENST00000288344 FAM210AQ96ND0 272 aa6.22□□□□□ -1.41
HMGN1-201ENST00000288344 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
HMGN1-201ENST00000288344 IGHV3-73A0A0B4J1V6 119 aa6.21□□□□□ -1.42
HMGN1-201ENST00000288344 SRP19P09132 144 aaKnown RBP6.21□□□□□ -1.42
HMGN1-201ENST00000288344 DNAH10OSP0CZ25 163 aa6.21□□□□□ -1.42
HMGN1-201ENST00000288344 GNG4P50150 75 aa6.21□□□□□ -1.42
HMGN1-201ENST00000288344 CNFNQ9BYD5 112 aa6.21□□□□□ -1.42
HMGN1-201ENST00000288344 FAT1Q14517 4588 aa6.2□□□□□ -1.42
HMGN1-201ENST00000288344 SIVA1O15304 175 aa6.2□□□□□ -1.42
HMGN1-201ENST00000288344 GZMBP10144 247 aa6.2□□□□□ -1.42
HMGN1-201ENST00000288344 SRIP30626 198 aa6.2□□□□□ -1.42
HMGN1-201ENST00000288344 FOXA3P55318 350 aaPredicted RBP6.2□□□□□ -1.42
HMGN1-201ENST00000288344 RHOHQ15669 191 aa6.2□□□□□ -1.42
HMGN1-201ENST00000288344 C1orf134Q5TEV5 83 aa6.2□□□□□ -1.42
HMGN1-201ENST00000288344 WDR73Q6P4I2 378 aa6.2□□□□□ -1.42
HMGN1-201ENST00000288344 SH2D6Q7Z4S9 175 aa6.2□□□□□ -1.42
HMGN1-201ENST00000288344 OR10G8Q8NGN5 311 aa6.2□□□□□ -1.42
HMGN1-201ENST00000288344 MSRB1Q9NZV6 116 aa6.2□□□□□ -1.42
HMGN1-201ENST00000288344 PHLDA3Q9Y5J5 127 aa6.2□□□□□ -1.42
HMGN1-201ENST00000288344 LY96Q9Y6Y9 160 aa6.2□□□□□ -1.42
HMGN1-201ENST00000288344 M0R381 172 aa6.19□□□□□ -1.42
HMGN1-201ENST00000288344 RHODO00212 210 aa6.19□□□□□ -1.42
HMGN1-201ENST00000288344 FAM231DQ6ZW35 169 aa6.19□□□□□ -1.42
HMGN1-201ENST00000288344 WFDC10BQ8IUB3 73 aa6.19□□□□□ -1.42
HMGN1-201ENST00000288344 ZFP82Q8N141 532 aa6.19□□□□□ -1.42
HMGN1-201ENST00000288344 C6orf223Q8N319 242 aa6.19□□□□□ -1.42
HMGN1-201ENST00000288344 GTSF1Q8WW33 167 aa6.19□□□□□ -1.42
HMGN1-201ENST00000288344 TNFRSF18Q9Y5U5 241 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms