RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 MRPS12O15235 138 aaKnown RBP9.79□□□□□ -0.84
ZIC3-201ENST00000287538 ATP5LO75964 103 aa9.79□□□□□ -0.84
ZIC3-201ENST00000287538 GATA1P15976 413 aaPredicted RBP9.79□□□□□ -0.84
ZIC3-201ENST00000287538 SMCPP49901 116 aaPredicted RBP9.79□□□□□ -0.84
ZIC3-201ENST00000287538 RHPN1-AS1Q9BWJ2 59 aa9.79□□□□□ -0.84
ZIC3-201ENST00000287538 CLPSL1A2RUU4 121 aa9.79□□□□□ -0.84
ZIC3-201ENST00000287538 OR11H12B2RN74 326 aa9.79□□□□□ -0.84
ZIC3-201ENST00000287538 HTN1P15515 57 aa9.79□□□□□ -0.84
ZIC3-201ENST00000287538 PSMB2P49721 201 aa9.79□□□□□ -0.84
ZIC3-201ENST00000287538 SYNJ2BPP57105 145 aa9.79□□□□□ -0.84
ZIC3-201ENST00000287538 OR11H1Q8NG94 326 aa9.79□□□□□ -0.84
ZIC3-201ENST00000287538 OR11H2Q8NH07 326 aa9.79□□□□□ -0.84
ZIC3-201ENST00000287538 ZNF469Q96JG9 3925 aaPredicted RBP9.78□□□□□ -0.84
ZIC3-201ENST00000287538 LOC107984156A0A0G2JMH3 177 aa9.78□□□□□ -0.84
ZIC3-201ENST00000287538 TNFRSF6BO95407 300 aa9.78□□□□□ -0.84
ZIC3-201ENST00000287538 IGF1P05019 195 aa9.78□□□□□ -0.84
ZIC3-201ENST00000287538 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.78□□□□□ -0.84
ZIC3-201ENST00000287538 ARL17AQ8IVW1 177 aa9.78□□□□□ -0.84
ZIC3-201ENST00000287538 YAE1D1Q9NRH1 226 aa9.78□□□□□ -0.84
ZIC3-201ENST00000287538 CFAP126Q5VTH2 177 aa9.78□□□□□ -0.84
ZIC3-201ENST00000287538 PRR25Q96S07 402 aa9.78□□□□□ -0.84
ZIC3-201ENST00000287538 DEFB104AQ8WTQ1 72 aa9.77□□□□□ -0.84
ZIC3-201ENST00000287538 NXT2Q9NPJ8 142 aaKnown RBP9.77□□□□□ -0.84
ZIC3-201ENST00000287538 PRSS29PA6NIE9 313 aa9.77□□□□□ -0.85
ZIC3-201ENST00000287538 MORN3Q6PF18 240 aaPredicted RBP9.77□□□□□ -0.85
ZIC3-201ENST00000287538 DLX4Q92988 240 aaPredicted RBP9.77□□□□□ -0.85
ZIC3-201ENST00000287538 FAM223BA6NKX1 122 aa9.77□□□□□ -0.85
ZIC3-201ENST00000287538 B5MCH6 92 aa9.77□□□□□ -0.85
ZIC3-201ENST00000287538 FAM223AQ8IWN6 122 aa9.77□□□□□ -0.85
ZIC3-201ENST00000287538 AGPAT4-IT1Q9H0P7 198 aa9.77□□□□□ -0.85
ZIC3-201ENST00000287538 NIPBLQ6KC79 2804 aaeCLIP9.77□□□□□ -0.85
ZIC3-201ENST00000287538 ZNF688P0C7X2 276 aa9.76□□□□□ -0.85
ZIC3-201ENST00000287538 RNF185Q96GF1 192 aa9.76□□□□□ -0.85
ZIC3-201ENST00000287538 TEP1Q99973 2627 aaKnown RBP9.76□□□□□ -0.85
ZIC3-201ENST00000287538 TRBV7-3A0A075B6L6 115 aa9.76□□□□□ -0.85
ZIC3-201ENST00000287538 C18orf65Q6ZTR6 163 aa9.76□□□□□ -0.85
ZIC3-201ENST00000287538 LYPD1Q8N2G4 141 aa9.76□□□□□ -0.85
ZIC3-201ENST00000287538 ATP6V0E2Q8NHE4 81 aa9.76□□□□□ -0.85
ZIC3-201ENST00000287538 MYOZ3Q8TDC0 251 aa9.76□□□□□ -0.85
ZIC3-201ENST00000287538 UFC1Q9Y3C8 167 aa9.76□□□□□ -0.85
ZIC3-201ENST00000287538 HLA-DRB4P13762 266 aa9.76□□□□□ -0.85
ZIC3-201ENST00000287538 SRSF2Q01130 221 aaKnown RBP9.76□□□□□ -0.85
ZIC3-201ENST00000287538 PDE6HQ13956 83 aa9.76□□□□□ -0.85
ZIC3-201ENST00000287538 HLA-DRB4X5D2U9 266 aa9.76□□□□□ -0.85
ZIC3-201ENST00000287538 GAGE5Q13069 117 aa9.75□□□□□ -0.85
ZIC3-201ENST00000287538 GAGE6Q13070 117 aa9.75□□□□□ -0.85
ZIC3-201ENST00000287538 LINC01549A6NIU2 74 aa9.75□□□□□ -0.85
ZIC3-201ENST00000287538 IGHG4P01861 327 aa9.74□□□□□ -0.85
ZIC3-201ENST00000287538 S100A4P26447 101 aaKnown RBP9.74□□□□□ -0.85
ZIC3-201ENST00000287538 ZFP2Q6ZN57 461 aa9.74□□□□□ -0.85
ZIC3-201ENST00000287538 SMR3AQ99954 134 aa9.74□□□□□ -0.85
ZIC3-201ENST00000287538 VPREB3Q9UKI3 123 aa9.74□□□□□ -0.85
ZIC3-201ENST00000287538 RNASE4P34096 147 aaKnown RBP9.74□□□□□ -0.85
ZIC3-201ENST00000287538 USMG5Q96IX5 58 aa9.74□□□□□ -0.85
ZIC3-201ENST00000287538 ZFAND6Q6FIF0 208 aa9.73□□□□□ -0.85
ZIC3-201ENST00000287538 PPDPFLQ8WWR9 84 aa9.73□□□□□ -0.85
ZIC3-201ENST00000287538 C20orf173Q96LM9 149 aa9.73□□□□□ -0.85
ZIC3-201ENST00000287538 CARD19Q96LW7 228 aa9.73□□□□□ -0.85
ZIC3-201ENST00000287538 SETXQ7Z333 2677 aaKnown RBP9.73□□□□□ -0.85
ZIC3-201ENST00000287538 H3BVH4 76 aa9.73□□□□□ -0.85
ZIC3-201ENST00000287538 ANXA2RQ3ZCQ2 193 aa9.73□□□□□ -0.85
ZIC3-201ENST00000287538 MYMXA0A1B0GTQ4 84 aa9.73□□□□□ -0.85
ZIC3-201ENST00000287538 FABP5P3A8MUU1 101 aa9.73□□□□□ -0.85
ZIC3-201ENST00000287538 TEX29Q8N6K0 151 aa9.73□□□□□ -0.85
ZIC3-201ENST00000287538 OR10J6PQ8NGY7 276 aa9.73□□□□□ -0.85
ZIC3-201ENST00000287538 A0A087WX48 190 aa9.72□□□□□ -0.85
ZIC3-201ENST00000287538 PLA2G2AP14555 144 aa9.72□□□□□ -0.85
ZIC3-201ENST00000287538 CR1P17927 2039 aa9.72□□□□□ -0.85
ZIC3-201ENST00000287538 TRAV8-2A0A0B4J237 113 aa9.72□□□□□ -0.85
ZIC3-201ENST00000287538 IGLC6P0CF74 106 aa9.72□□□□□ -0.85
ZIC3-201ENST00000287538 LINC01559Q495D7 138 aa9.72□□□□□ -0.85
ZIC3-201ENST00000287538 Q8N8P6 123 aa9.72□□□□□ -0.85
ZIC3-201ENST00000287538 SLC50A1Q9BRV3 221 aa9.72□□□□□ -0.85
ZIC3-201ENST00000287538 DAZ1Q9NQZ3 744 aaKnown RBP9.72□□□□□ -0.85
ZIC3-201ENST00000287538 LINC01546A6NGU7 62 aa9.72□□□□□ -0.85
ZIC3-201ENST00000287538 M0R381 172 aa9.72□□□□□ -0.85
ZIC3-201ENST00000287538 KIR2DL4Q99706 377 aa9.72□□□□□ -0.85
ZIC3-201ENST00000287538 NDUFA4O00483 81 aa9.71□□□□□ -0.85
ZIC3-201ENST00000287538 SLURP1P55000 103 aa9.71□□□□□ -0.85
ZIC3-201ENST00000287538 A0A096LNT2 108 aa9.71□□□□□ -0.86
ZIC3-201ENST00000287538 PLNP26678 52 aa9.71□□□□□ -0.86
ZIC3-201ENST00000287538 SRSF9Q13242 221 aaKnown RBP eCLIP9.71□□□□□ -0.86
ZIC3-201ENST00000287538 SHISA2Q6UWI4 295 aa9.71□□□□□ -0.86
ZIC3-201ENST00000287538 TEN1Q86WV5 123 aa9.71□□□□□ -0.86
ZIC3-201ENST00000287538 IGHV4OR15-8A0A075B7B6 117 aa9.7□□□□□ -0.86
ZIC3-201ENST00000287538 A0A087WW49 117 aa9.7□□□□□ -0.86
ZIC3-201ENST00000287538 SPANXN1Q5VSR9 72 aa9.7□□□□□ -0.86
ZIC3-201ENST00000287538 J3QLI3 93 aa9.7□□□□□ -0.86
ZIC3-201ENST00000287538 LAGE3Q14657 143 aa9.7□□□□□ -0.86
ZIC3-201ENST00000287538 SCGB1D4Q6XE38 83 aa9.7□□□□□ -0.86
ZIC3-201ENST00000287538 TRAV12-2A0A075B6T6 113 aa9.7□□□□□ -0.86
ZIC3-201ENST00000287538 TRAV26-2A0A0B4J265 109 aa9.7□□□□□ -0.86
ZIC3-201ENST00000287538 LGALS1P09382 135 aaKnown RBP9.7□□□□□ -0.86
ZIC3-201ENST00000287538 ATRQ13535 2644 aa9.69□□□□□ -0.86
ZIC3-201ENST00000287538 IGHV7-4-1A0A0J9YVY3 117 aa9.69□□□□□ -0.86
ZIC3-201ENST00000287538 A6NJY4 79 aa9.69□□□□□ -0.86
ZIC3-201ENST00000287538 TMEM190Q8WZ59 177 aa9.69□□□□□ -0.86
ZIC3-201ENST00000287538 Q6YL49 198 aa9.69□□□□□ -0.86
ZIC3-201ENST00000287538 IGLV2-18A0A075B6J9 118 aa9.68□□□□□ -0.86
ZIC3-201ENST00000287538 HERV-K104P63124 156 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms