RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 C9orf85Q96MD7 179 aa8.54□□□□□ -1.04
SIRPB1-202ENST00000279477 MAP1AP78559 2803 aaPredicted RBP8.54□□□□□ -1.04
SIRPB1-202ENST00000279477 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 A0A1B0GWB2 263 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 H3BMG7 143 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 COX6B1P14854 86 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 HERVK_113P61574 105 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 C12orf74Q32Q52 190 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 TMEM95Q3KNT9 176 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 SPAG8Q99932 426 aaPredicted RBP8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 C1QTNF4Q9BXJ3 329 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 A0A096LNT2 108 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 MYMXA0A1B0GTQ4 84 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 SRD5A1P18405 259 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 RNF152Q8N8N0 203 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 UBE2E2Q96LR5 201 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 HIST1H4GQ99525 98 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 GEMIN7Q9H840 131 aaKnown RBP8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 SPTAN1Q13813 2472 aaKnown RBP8.53□□□□□ -1.04
SIRPB1-202ENST00000279477 TRGV11A0A075B6L2 103 aa8.52□□□□□ -1.05
SIRPB1-202ENST00000279477 TRAV12-3A0A0B4J271 114 aa8.52□□□□□ -1.05
SIRPB1-202ENST00000279477 ZNF688P0C7X2 276 aa8.52□□□□□ -1.05
SIRPB1-202ENST00000279477 LINC00315P59091 139 aa8.52□□□□□ -1.05
SIRPB1-202ENST00000279477 WFDC2Q14508 124 aa8.52□□□□□ -1.05
SIRPB1-202ENST00000279477 ETDBQ3ZM63 59 aa8.52□□□□□ -1.05
SIRPB1-202ENST00000279477 SUMO4Q6EEV6 95 aa8.52□□□□□ -1.05
SIRPB1-202ENST00000279477 DLX4Q92988 240 aaPredicted RBP8.52□□□□□ -1.05
SIRPB1-202ENST00000279477 IGHV3-16A0A0C4DH30 117 aa8.52□□□□□ -1.05
SIRPB1-202ENST00000279477 TGFAP01135 160 aa8.52□□□□□ -1.05
SIRPB1-202ENST00000279477 FSHBP01225 129 aa8.52□□□□□ -1.05
SIRPB1-202ENST00000279477 POLR2KP53803 58 aaKnown RBP8.52□□□□□ -1.05
SIRPB1-202ENST00000279477 CLUHP3Q96NS8 147 aa8.52□□□□□ -1.05
SIRPB1-202ENST00000279477 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.51□□□□□ -1.05
SIRPB1-202ENST00000279477 IGHV1OR15-1A0A075B7D0 117 aa8.51□□□□□ -1.05
SIRPB1-202ENST00000279477 TRBV27A0A0K0K1C4 114 aa8.51□□□□□ -1.05
SIRPB1-202ENST00000279477 K7ERJ3 54 aa8.51□□□□□ -1.05
SIRPB1-202ENST00000279477 RHOHQ15669 191 aa8.51□□□□□ -1.05
SIRPB1-202ENST00000279477 Q6YL49 198 aa8.51□□□□□ -1.05
SIRPB1-202ENST00000279477 TTTY13Q9BZ97 58 aa8.51□□□□□ -1.05
SIRPB1-202ENST00000279477 SPANXA1Q9NS26 97 aa8.51□□□□□ -1.05
SIRPB1-202ENST00000279477 CELSR1Q9NYQ6 3014 aa8.51□□□□□ -1.05
SIRPB1-202ENST00000279477 PRSS29PA6NIE9 313 aa8.5□□□□□ -1.05
SIRPB1-202ENST00000279477 F5H697 171 aa8.5□□□□□ -1.05
SIRPB1-202ENST00000279477 FOXI1Q12951 378 aa8.5□□□□□ -1.05
SIRPB1-202ENST00000279477 ZFP2Q6ZN57 461 aa8.5□□□□□ -1.05
SIRPB1-202ENST00000279477 TRPT1Q86TN4 253 aaKnown RBP8.5□□□□□ -1.05
SIRPB1-202ENST00000279477 TP53TG1Q9Y2A0 90 aa8.5□□□□□ -1.05
SIRPB1-202ENST00000279477 TRAV2A0A0B4J234 112 aa8.5□□□□□ -1.05
SIRPB1-202ENST00000279477 CRYBA4P53673 196 aa8.5□□□□□ -1.05
SIRPB1-202ENST00000279477 PMVKQ15126 192 aa8.5□□□□□ -1.05
SIRPB1-202ENST00000279477 SDHAF1A6NFY7 115 aa8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 TMEM262E9PQX1 116 aa8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 SPRY2O43597 315 aa8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 EDN2P20800 178 aa8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 SYNJ2BPP57105 145 aa8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 NSUN5P1Q3KNT7 163 aa8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 MAPKAPK5-AS1Q8N8E1 139 aa8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 ZNF702PQ9H963 129 aa8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 BEX4Q9NWD9 120 aaPredicted RBP8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 PRO0461Q9UI25 63 aa8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 HOXA3O43365 443 aaPredicted RBP8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 HOXD3P31249 432 aaPredicted RBP8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 ZNF56Q15929 161 aa8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 PRADC1Q9BSG0 188 aa8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 SELENOKQ9Y6D0 94 aa8.49□□□□□ -1.05
SIRPB1-202ENST00000279477 MUC4Q99102 2169 aa8.48□□□□□ -1.05
SIRPB1-202ENST00000279477 TRBV7-3A0A075B6L6 115 aa8.48□□□□□ -1.05
SIRPB1-202ENST00000279477 TRAV26-1A0A087WT03 109 aa8.48□□□□□ -1.05
SIRPB1-202ENST00000279477 IGIPA6NJ69 53 aa8.48□□□□□ -1.05
SIRPB1-202ENST00000279477 LRRC75A-AS1Q8N1F1 130 aa8.48□□□□□ -1.05
SIRPB1-202ENST00000279477 TRBV20-1A0A075B6N2 111 aa8.48□□□□□ -1.05
SIRPB1-202ENST00000279477 A0A087WWL8 130 aa8.48□□□□□ -1.05
SIRPB1-202ENST00000279477 SPINK8P0C7L1 97 aa8.48□□□□□ -1.05
SIRPB1-202ENST00000279477 Q8N1Y9 231 aa8.48□□□□□ -1.05
SIRPB1-202ENST00000279477 PPDPFLQ8WWR9 84 aa8.48□□□□□ -1.05
SIRPB1-202ENST00000279477 EDA2RQ9HAV5 297 aa8.48□□□□□ -1.05
SIRPB1-202ENST00000279477 ZNF256Q9Y2P7 627 aaPredicted RBP8.48□□□□□ -1.05
SIRPB1-202ENST00000279477 DOPEY1Q5JWR5 2465 aa8.47□□□□□ -1.05
SIRPB1-202ENST00000279477 C11orf86A6NJI1 115 aa8.47□□□□□ -1.05
SIRPB1-202ENST00000279477 ZNF815PA8K554 130 aa8.47□□□□□ -1.05
SIRPB1-202ENST00000279477 IGHV4-31P0DP07 118 aa8.47□□□□□ -1.05
SIRPB1-202ENST00000279477 FAM74A4Q5TZK3 123 aa8.47□□□□□ -1.05
SIRPB1-202ENST00000279477 CFAP126Q5VTH2 177 aa8.47□□□□□ -1.05
SIRPB1-202ENST00000279477 SH2D6Q7Z4S9 175 aa8.47□□□□□ -1.05
SIRPB1-202ENST00000279477 TEX29Q8N6K0 151 aa8.47□□□□□ -1.05
SIRPB1-202ENST00000279477 PEMTQ9UBM1 199 aa8.47□□□□□ -1.05
SIRPB1-202ENST00000279477 SPINK13Q1W4C9 94 aa8.46□□□□□ -1.05
SIRPB1-202ENST00000279477 PIK3CD-AS1Q5SR53 167 aa8.46□□□□□ -1.05
SIRPB1-202ENST00000279477 C10orf99Q6UWK7 81 aa8.46□□□□□ -1.05
SIRPB1-202ENST00000279477 Q8N2B8 174 aa8.46□□□□□ -1.05
SIRPB1-202ENST00000279477 NRGNQ92686 78 aa8.46□□□□□ -1.05
SIRPB1-202ENST00000279477 PKD1L2Q7Z442 2459 aa8.46□□□□□ -1.05
SIRPB1-202ENST00000279477 CACNA1AO00555 2505 aa8.46□□□□□ -1.06
SIRPB1-202ENST00000279477 CFAP46Q8IYW2 2715 aa8.46□□□□□ -1.06
SIRPB1-202ENST00000279477 A8MTW9 85 aa8.46□□□□□ -1.06
SIRPB1-202ENST00000279477 M0QY20 66 aa8.46□□□□□ -1.06
SIRPB1-202ENST00000279477 TSPAN13O95857 204 aa8.46□□□□□ -1.06
SIRPB1-202ENST00000279477 Q5PR19 223 aa8.46□□□□□ -1.06
SIRPB1-202ENST00000279477 SCGB1D4Q6XE38 83 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms