RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 MAP6D1Q9H9H5 199 aa13.26□□□□□ -0.29
CAPN1-201ENST00000279247 DKK2Q9UBU2 259 aa13.26□□□□□ -0.29
CAPN1-201ENST00000279247 GOLT1BQ9Y3E0 138 aa13.26□□□□□ -0.29
CAPN1-201ENST00000279247 LINC01545Q5VT33 79 aa13.26□□□□□ -0.29
CAPN1-201ENST00000279247 IGHV3-73A0A0B4J1V6 119 aa13.26□□□□□ -0.29
CAPN1-201ENST00000279247 NUDT3O95989 172 aa13.26□□□□□ -0.29
CAPN1-201ENST00000279247 LAMTOR2Q9Y2Q5 125 aa13.26□□□□□ -0.29
CAPN1-201ENST00000279247 IGHV3-16A0A0C4DH30 117 aa13.25□□□□□ -0.29
CAPN1-201ENST00000279247 H3BMM0 161 aa13.25□□□□□ -0.29
CAPN1-201ENST00000279247 RNASE1P07998 156 aaKnown RBP13.25□□□□□ -0.29
CAPN1-201ENST00000279247 FCER1GP30273 86 aa13.25□□□□□ -0.29
CAPN1-201ENST00000279247 SUMO2P61956 95 aaKnown RBP13.24□□□□□ -0.29
CAPN1-201ENST00000279247 ATRQ13535 2644 aa13.24□□□□□ -0.29
CAPN1-201ENST00000279247 IGLV2-18A0A075B6J9 118 aa13.24□□□□□ -0.29
CAPN1-201ENST00000279247 HINT1P49773 126 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-201ENST00000279247 LAGE3Q14657 143 aa13.24□□□□□ -0.29
CAPN1-201ENST00000279247 ZNF56Q15929 161 aa13.24□□□□□ -0.29
CAPN1-201ENST00000279247 MRAP2Q96G30 205 aa13.24□□□□□ -0.29
CAPN1-201ENST00000279247 XCL2Q9UBD3 114 aa13.24□□□□□ -0.29
CAPN1-201ENST00000279247 SAP30O75446 220 aa13.23□□□□□ -0.29
CAPN1-201ENST00000279247 ZNF876PQ49A33 203 aa13.23□□□□□ -0.29
CAPN1-201ENST00000279247 SMIM2Q9BVW6 85 aa13.23□□□□□ -0.29
CAPN1-201ENST00000279247 HLA-DRB4P13762 266 aa13.23□□□□□ -0.29
CAPN1-201ENST00000279247 HLA-DRB4X5D2U9 266 aa13.23□□□□□ -0.29
CAPN1-201ENST00000279247 TSSC4Q9Y5U2 329 aaPredicted RBP13.23□□□□□ -0.29
CAPN1-201ENST00000279247 VWFP04275 2813 aa13.22□□□□□ -0.29
CAPN1-201ENST00000279247 CSTL1Q9H114 145 aa13.22□□□□□ -0.29
CAPN1-201ENST00000279247 HILS1P60008 231 aa13.21□□□□□ -0.29
CAPN1-201ENST00000279247 SUMO4Q6EEV6 95 aa13.21□□□□□ -0.29
CAPN1-201ENST00000279247 MED14OSP0DP75 135 aa13.21□□□□□ -0.3
CAPN1-201ENST00000279247 ANKRD39Q53RE8 183 aa13.21□□□□□ -0.3
CAPN1-201ENST00000279247 ODF3Q96PU9 254 aa13.21□□□□□ -0.3
CAPN1-201ENST00000279247 WFDC10AQ9H1F0 79 aa13.21□□□□□ -0.3
CAPN1-201ENST00000279247 ODF3L2Q3SX64 289 aa13.2□□□□□ -0.3
CAPN1-201ENST00000279247 LINC01587Q99440 93 aa13.2□□□□□ -0.3
CAPN1-201ENST00000279247 ZNF256Q9Y2P7 627 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-201ENST00000279247 TMEM208Q9BTX3 173 aa13.2□□□□□ -0.3
CAPN1-201ENST00000279247 MAST4O15021 2626 aa13.19□□□□□ -0.3
CAPN1-201ENST00000279247 C2orf88Q9BSF0 95 aa13.19□□□□□ -0.3
CAPN1-201ENST00000279247 LINC00315P59091 139 aa13.19□□□□□ -0.3
CAPN1-201ENST00000279247 KIF25-AS1Q9Y6Z4 181 aa13.19□□□□□ -0.3
CAPN1-201ENST00000279247 NMUP48645 174 aa13.18□□□□□ -0.3
CAPN1-201ENST00000279247 C9orf85Q96MD7 179 aa13.18□□□□□ -0.3
CAPN1-201ENST00000279247 ST20Q9HBF5 79 aa13.18□□□□□ -0.3
CAPN1-201ENST00000279247 SCGB2A2Q13296 93 aa13.18□□□□□ -0.3
CAPN1-201ENST00000279247 SPAG8Q99932 426 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-201ENST00000279247 FHL3Q13643 280 aa13.18□□□□□ -0.3
CAPN1-201ENST00000279247 SLC25A34Q6PIV7 304 aa13.18□□□□□ -0.3
CAPN1-201ENST00000279247 STHQ8IWL8 128 aa13.18□□□□□ -0.3
CAPN1-201ENST00000279247 SYT8Q8NBV8 401 aa13.18□□□□□ -0.3
CAPN1-201ENST00000279247 TMEM160Q9NX00 188 aa13.18□□□□□ -0.3
CAPN1-201ENST00000279247 TRRAPQ9Y4A5 3859 aa13.17□□□□□ -0.3
CAPN1-201ENST00000279247 LGALS9BQ3B8N2 356 aa13.17□□□□□ -0.3
CAPN1-201ENST00000279247 LGALS9CQ6DKI2 356 aa13.17□□□□□ -0.3
CAPN1-201ENST00000279247 PROK1P58294 105 aa13.17□□□□□ -0.3
CAPN1-201ENST00000279247 NXPH4O95158 308 aa13.16□□□□□ -0.3
CAPN1-201ENST00000279247 TTTY13Q9BZ97 58 aa13.16□□□□□ -0.3
CAPN1-201ENST00000279247 OR11H12B2RN74 326 aa13.15□□□□□ -0.3
CAPN1-201ENST00000279247 SCGB3A1Q96QR1 104 aa13.15□□□□□ -0.3
CAPN1-201ENST00000279247 TRGV11A0A075B6L2 103 aa13.15□□□□□ -0.3
CAPN1-201ENST00000279247 P0DMU3 169 aa13.15□□□□□ -0.3
CAPN1-201ENST00000279247 FAM231AP0DMU4 169 aa13.15□□□□□ -0.3
CAPN1-201ENST00000279247 FAM231CP0DMU5 169 aa13.15□□□□□ -0.3
CAPN1-201ENST00000279247 G0S2P27469 103 aa13.15□□□□□ -0.3
CAPN1-201ENST00000279247 Q6ZVH6 145 aa13.15□□□□□ -0.3
CAPN1-201ENST00000279247 CRYGDP07320 174 aa13.15□□□□□ -0.3
CAPN1-201ENST00000279247 ODF1Q14990 250 aa13.15□□□□□ -0.3
CAPN1-201ENST00000279247 SDHAF1A6NFY7 115 aa13.14□□□□□ -0.31
CAPN1-201ENST00000279247 C2orf66Q6UXQ4 117 aa13.14□□□□□ -0.31
CAPN1-201ENST00000279247 MRPL35Q9NZE8 188 aaKnown RBP13.14□□□□□ -0.31
CAPN1-201ENST00000279247 MPV17L2Q567V2 206 aa13.14□□□□□ -0.31
CAPN1-201ENST00000279247 C20orf78Q9BR46 151 aa13.14□□□□□ -0.31
CAPN1-201ENST00000279247 NBEAL2Q6ZNJ1 2754 aa13.14□□□□□ -0.31
CAPN1-201ENST00000279247 RPL35AP18077 110 aaKnown RBP13.13□□□□□ -0.31
CAPN1-201ENST00000279247 RPL39P62891 51 aaKnown RBP13.13□□□□□ -0.31
CAPN1-201ENST00000279247 GTSCR1Q86UQ5 136 aa13.13□□□□□ -0.31
CAPN1-201ENST00000279247 C16orf95Q9H693 158 aa13.13□□□□□ -0.31
CAPN1-201ENST00000279247 MRPL16Q9NX20 251 aaKnown RBP13.13□□□□□ -0.31
CAPN1-201ENST00000279247 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-201ENST00000279247 LBHQ53QV2 105 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-201ENST00000279247 ZC2HC1BQ5TFG8 222 aa13.13□□□□□ -0.31
CAPN1-201ENST00000279247 LINC01546A6NGU7 62 aa13.13□□□□□ -0.31
CAPN1-201ENST00000279247 ATP5LO75964 103 aa13.13□□□□□ -0.31
CAPN1-201ENST00000279247 NUTF2P61970 127 aaKnown RBP13.13□□□□□ -0.31
CAPN1-201ENST00000279247 ORMDL2Q53FV1 153 aa13.13□□□□□ -0.31
CAPN1-201ENST00000279247 PCP2Q8IVA1 136 aa13.13□□□□□ -0.31
CAPN1-201ENST00000279247 KRTAP10-3P60369 221 aa13.12□□□□□ -0.31
CAPN1-201ENST00000279247 AZU1P20160 251 aa13.12□□□□□ -0.31
CAPN1-201ENST00000279247 EMP1P54849 157 aa13.12□□□□□ -0.31
CAPN1-201ENST00000279247 Q9UF83 564 aa13.11□□□□□ -0.31
CAPN1-201ENST00000279247 INSP01308 110 aa13.11□□□□□ -0.31
CAPN1-201ENST00000279247 PRSS47A8MTI9 375 aa13.1□□□□□ -0.31
CAPN1-201ENST00000279247 ADARB2-AS1A8MUL3 147 aa13.1□□□□□ -0.31
CAPN1-201ENST00000279247 IGKCP01834 107 aa13.1□□□□□ -0.31
CAPN1-201ENST00000279247 PF4P02776 101 aa13.1□□□□□ -0.31
CAPN1-201ENST00000279247 ERASQ7Z444 233 aa13.1□□□□□ -0.31
CAPN1-201ENST00000279247 TRAV2A0A0B4J234 112 aa13.1□□□□□ -0.31
CAPN1-201ENST00000279247 KIR2DL4Q99706 377 aa13.1□□□□□ -0.31
CAPN1-201ENST00000279247 TP53TG1Q9Y2A0 90 aa13.1□□□□□ -0.31
CAPN1-201ENST00000279247 IGKV2D-26A0A0A0MRZ7 120 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 175.8 ms