RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 PROP1O75360 226 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 IGLC2P0DOY2 106 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 IGLC3P0DOY3 106 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 IGLL1P15814 213 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 PDE6HQ13956 83 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 IGFL2Q6UWQ7 119 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 FAM231DQ6ZW35 169 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 ZNF491Q8N8L2 437 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 ZC2HC1AQ96GY0 325 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 LINC00477Q96M19 166 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 VGLL1Q99990 258 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 C20orf144Q9BQM9 153 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 TOMM7Q9P0U1 55 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 FRYQ5TBA9 3013 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 CFAP46Q8IYW2 2715 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 IGKV1OR2-108A0A075B7D4 117 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 TRAV2A0A0B4J234 112 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 TSHBP01222 138 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 HLA-DMBP28068 263 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 SEC11AP67812 179 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 HSD52Q0P140 79 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 SMAGPQ0VAQ4 97 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 ZNF876PQ49A33 203 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 FAM104BQ5XKR9 115 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 PATE2Q6UY27 113 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 LCNL1Q6ZST4 164 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 MRPL52Q86TS9 123 aaKnown RBP2.2□□□□□ -2.06
HERC4-201ENST00000277817 MED12LQ86YW9 2145 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 TMEM75Q8N9X5 138 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 OR13C6PQ8NH95 151 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 PTH2Q96A98 100 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 KRTAP4-12Q9BQ66 201 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 PYGO2Q9BRQ0 406 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 CSTL1Q9H114 145 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 ZNF492Q9P255 531 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 KAAG1Q9UBP8 84 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 PKHD1P08F94 4074 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 TRAV26-2A0A0B4J265 109 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 IGHV1-24A0A0C4DH33 117 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 DUSP14O95147 198 aaKnown RBP2.2□□□□□ -2.06
HERC4-201ENST00000277817 SYNJ2BPP57105 145 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 ODF3L1Q8IXM7 274 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 RNF185Q96GF1 192 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 C11orf1Q9H5F2 150 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 MRPL51Q4U2R6 128 aaKnown RBP2.2□□□□□ -2.06
HERC4-201ENST00000277817 NOTCH2NLQ7Z3S9 236 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 TMEM101Q96IK0 257 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 USMG5Q96IX5 58 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 DPH3P1Q9H4G8 78 aa2.2□□□□□ -2.06
HERC4-201ENST00000277817 MRPS16Q9Y3D3 137 aaKnown RBP2.2□□□□□ -2.06
HERC4-201ENST00000277817 ZNF469Q96JG9 3925 aaPredicted RBP2.2□□□□□ -2.06
HERC4-201ENST00000277817 VPS13DQ5THJ4 4388 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 PLXNB1O43157 2135 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 NXPH4O95158 308 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 IGHV4-39P01824 125 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 CD28P10747 220 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 NPC2P61916 151 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 SAMD13Q5VXD3 122 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 Q6ZVH6 145 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 DAZ1Q9NQZ3 744 aaKnown RBP2.19□□□□□ -2.06
HERC4-201ENST00000277817 MRPL36Q9P0J6 103 aaKnown RBP2.19□□□□□ -2.06
HERC4-201ENST00000277817 TMEM14CQ9P0S9 112 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 COX11Q9Y6N1 276 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 DNAH9Q9NYC9 4486 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 IGHV1-69DA0A0B4J2H0 117 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 TRBV7-9A0A0J9YWB2 115 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 KNCNA6PVL3 124 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 H3BRN7 92 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 J3QLI3 93 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 LTAP01374 205 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 IGHV1-69P01742 117 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 PROK1P58294 105 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 TEX29Q8N6K0 151 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 ACANP16112 2415 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 WDFY4Q6ZS81 3184 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 NBEAL1Q6ZS30 2694 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 TRAV12-2A0A075B6T6 113 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 FAM223BA6NKX1 122 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 H3BRM9 83 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 K7EQG2 157 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 CD5LO43866 347 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 NPYP01303 97 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 IGKV1-17P01599 117 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 IGHV3-53P01767 116 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 MSMBP08118 114 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 HTN3P15516 51 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 GAGE5Q13069 117 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 GAGE6Q13070 117 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 TTC32Q5I0X7 151 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 COA6Q5JTJ3 125 aaKnown RBP2.19□□□□□ -2.06
HERC4-201ENST00000277817 NEGR1Q7Z3B1 354 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 FAM19A5Q7Z5A7 132 aaPredicted RBP2.19□□□□□ -2.06
HERC4-201ENST00000277817 FAM223AQ8IWN6 122 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 FAM167A-AS1Q96KT0 104 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 CHD3Q12873 2000 aaKnown RBP2.19□□□□□ -2.06
HERC4-201ENST00000277817 F6UB75 175 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 PLNP26678 52 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 SPINK13Q1W4C9 94 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 NSUN5P1Q3KNT7 163 aa2.19□□□□□ -2.06
HERC4-201ENST00000277817 TEX43Q6ZNM6 134 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms