RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 LGALS9BQ3B8N2 356 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 LGALS9CQ6DKI2 356 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 UQCR10Q9UDW1 63 aa7.04□□□□□ -1.28
TRIM55-201ENST00000276573 FLNBO75369 2602 aaKnown RBP7.03□□□□□ -1.28
TRIM55-201ENST00000276573 ANK3Q12955 4377 aaKnown RBP7.03□□□□□ -1.28
TRIM55-201ENST00000276573 A0A087WWL8 130 aa7.03□□□□□ -1.28
TRIM55-201ENST00000276573 hDV102S1A0JD36 115 aa7.03□□□□□ -1.28
TRIM55-201ENST00000276573 CMC4P56277 68 aaPredicted RBP7.03□□□□□ -1.28
TRIM55-201ENST00000276573 PMCHL2Q9BQD1 86 aa7.03□□□□□ -1.28
TRIM55-201ENST00000276573 HIVEP2P31629 2446 aa7.03□□□□□ -1.28
TRIM55-201ENST00000276573 OR11H12B2RN74 326 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 SAP30O75446 220 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 CRYGDP07320 174 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 HTN1P15515 57 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 NDUFA11Q86Y39 141 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 C18orf15Q96N68 181 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 LINC00467Q9BRT7 94 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 F5H697 171 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 K7EMI3 77 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 IGLV1-51P01701 117 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 RPL32P62910 135 aaKnown RBP7.02□□□□□ -1.29
TRIM55-201ENST00000276573 ZNF876PQ49A33 203 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 SUMO4Q6EEV6 95 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 STHQ8IWL8 128 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 LINC01587Q99440 93 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 ST20Q9HBF5 79 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 GOLT1BQ9Y3E0 138 aa7.02□□□□□ -1.29
TRIM55-201ENST00000276573 HSBP1L1C9JCN9 74 aa7.01□□□□□ -1.29
TRIM55-201ENST00000276573 ATP5LO75964 103 aa7.01□□□□□ -1.29
TRIM55-201ENST00000276573 PRM2P04554 102 aa7.01□□□□□ -1.29
TRIM55-201ENST00000276573 ORMDL2Q53FV1 153 aa7.01□□□□□ -1.29
TRIM55-201ENST00000276573 TRPT1Q86TN4 253 aaKnown RBP7.01□□□□□ -1.29
TRIM55-201ENST00000276573 SNHG12Q9BXW3 62 aa7.01□□□□□ -1.29
TRIM55-201ENST00000276573 CSTL1Q9H114 145 aa7.01□□□□□ -1.29
TRIM55-201ENST00000276573 M0R143 59 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 NUDT3O95989 172 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 INSP01308 110 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 POLR2KP53803 58 aaKnown RBP7□□□□□ -1.29
TRIM55-201ENST00000276573 BEAN1Q3B7T3 259 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 LBHQ53QV2 105 aaPredicted RBP7□□□□□ -1.29
TRIM55-201ENST00000276573 FAM74A4Q5TZK3 123 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 Q6ZN92 141 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 MTORP42345 2549 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 BAHCC1Q9P281 2608 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 TRBV6-5A0A0K0K1A5 114 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 PRSS1P07477 247 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 MRPL52Q86TS9 123 aaKnown RBP7□□□□□ -1.29
TRIM55-201ENST00000276573 PTH2Q96A98 100 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 FAM110AQ9BQ89 295 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 C2orf88Q9BSF0 95 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 XCL2Q9UBD3 114 aa7□□□□□ -1.29
TRIM55-201ENST00000276573 M0QY20 66 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 VCYO14598 125 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 EREGO14944 169 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 CRLF1O75462 422 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 ZNF415Q09FC8 603 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 PIK3CD-AS1Q5SR53 167 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 CUBNO60494 3623 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 M0R2P5 195 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 HNRNPA3P51991 378 aaKnown RBP6.99□□□□□ -1.29
TRIM55-201ENST00000276573 ODF1Q14990 250 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 ZNF56Q15929 161 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 C1orf158Q8N1D5 194 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 C11orf72Q8NBR9 251 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 TOMM6Q96B49 74 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 ZMAT4Q9H898 229 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 C19orf73Q9NVV2 129 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 DKK2Q9UBU2 259 aa6.99□□□□□ -1.29
TRIM55-201ENST00000276573 OTOGQ6ZRI0 2925 aa6.98□□□□□ -1.29
TRIM55-201ENST00000276573 SETXQ7Z333 2677 aaKnown RBP6.98□□□□□ -1.29
TRIM55-201ENST00000276573 NUTF2P61970 127 aaKnown RBP6.98□□□□□ -1.29
TRIM55-201ENST00000276573 MORN3Q6PF18 240 aaPredicted RBP6.98□□□□□ -1.29
TRIM55-201ENST00000276573 NEGR1Q7Z3B1 354 aa6.98□□□□□ -1.29
TRIM55-201ENST00000276573 LINC00482Q8N8I6 264 aa6.98□□□□□ -1.29
TRIM55-201ENST00000276573 SPXQ9BT56 116 aa6.98□□□□□ -1.29
TRIM55-201ENST00000276573 MRPS16Q9Y3D3 137 aaKnown RBP6.98□□□□□ -1.29
TRIM55-201ENST00000276573 SDHAF1A6NFY7 115 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 A8MWV9 139 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-201ENST00000276573 PF4P02776 101 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 AZU1P20160 251 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 SCGB3A1Q96QR1 104 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 WNK1Q9H4A3 2382 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 TRBV27A0A0K0K1C4 114 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 G0S2P27469 103 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 ANKRD39Q53RE8 183 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 SLC25A34Q6PIV7 304 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 C2orf66Q6UXQ4 117 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 STPG4Q8N801 248 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 TMEM208Q9BTX3 173 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 EDA2RQ9HAV5 297 aa6.97□□□□□ -1.29
TRIM55-201ENST00000276573 A0A087WX48 190 aa6.96□□□□□ -1.3
TRIM55-201ENST00000276573 UFSP1Q6NVU6 142 aa6.96□□□□□ -1.3
TRIM55-201ENST00000276573 ZFP2Q6ZN57 461 aa6.96□□□□□ -1.3
TRIM55-201ENST00000276573 KIR2DL4Q99706 377 aa6.96□□□□□ -1.3
TRIM55-201ENST00000276573 NOTCH2Q04721 2471 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 IGHV3OR16-12A0A075B7B8 117 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 H7C1H1 209 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 IGKCP01834 107 aa6.95□□□□□ -1.3
TRIM55-201ENST00000276573 GIG44P09565 113 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms