RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 SPTA1P02549 2419 aa6.71□□□□□ -1.34
SCUBE3-201ENST00000274938 H0Y9J4 135 aa6.71□□□□□ -1.34
SCUBE3-201ENST00000274938 MT-ATP8P03928 68 aa6.71□□□□□ -1.34
SCUBE3-201ENST00000274938 C4orf48Q5BLP8 95 aa6.71□□□□□ -1.34
SCUBE3-201ENST00000274938 FAM215AQ9Y5M1 114 aa6.71□□□□□ -1.34
SCUBE3-201ENST00000274938 SPRY2O43597 315 aa6.7□□□□□ -1.34
SCUBE3-201ENST00000274938 PRR15LQ9BU68 103 aa6.7□□□□□ -1.34
SCUBE3-201ENST00000274938 IGLC6P0CF74 106 aa6.7□□□□□ -1.34
SCUBE3-201ENST00000274938 APRG1Q8IVJ8 170 aa6.7□□□□□ -1.34
SCUBE3-201ENST00000274938 B9D2Q9BPU9 175 aa6.7□□□□□ -1.34
SCUBE3-201ENST00000274938 A0A1B0GXF2 115 aa6.7□□□□□ -1.34
SCUBE3-201ENST00000274938 WISP1O95388 367 aa6.7□□□□□ -1.34
SCUBE3-201ENST00000274938 UFSP1Q6NVU6 142 aa6.7□□□□□ -1.34
SCUBE3-201ENST00000274938 A0A0J9YXY3 114 aa6.7□□□□□ -1.34
SCUBE3-201ENST00000274938 PRR30Q53SZ7 412 aaPredicted RBP6.7□□□□□ -1.34
SCUBE3-201ENST00000274938 CACNA1IQ9P0X4 2223 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 IGHV4-59P01825 116 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 HHLA3Q9XRX5 114 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 AHCTF1Q8WYP5 2266 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 USP17L23D6RBM5 183 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 IMUPQ9GZP8 106 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 P0DMU3 169 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 FAM231AP0DMU4 169 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 FAM231CP0DMU5 169 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 IGKV4-1P06312 121 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 SIPA1L1O43166 1804 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 PRAC2D3DTV9 90 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 GPHB5Q86YW7 130 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 SEM1Q6ZVN7 128 aa6.69□□□□□ -1.34
SCUBE3-201ENST00000274938 WDR90Q96KV7 1748 aa6.68□□□□□ -1.34
SCUBE3-201ENST00000274938 IGKV2D-26A0A0A0MRZ7 120 aa6.68□□□□□ -1.34
SCUBE3-201ENST00000274938 PDCD11Q14690 1871 aaKnown RBP6.68□□□□□ -1.34
SCUBE3-201ENST00000274938 FREM3P0C091 2139 aa6.68□□□□□ -1.34
SCUBE3-201ENST00000274938 KIF26BQ2KJY2 2108 aa6.68□□□□□ -1.34
SCUBE3-201ENST00000274938 SLURP1P55000 103 aa6.68□□□□□ -1.34
SCUBE3-201ENST00000274938 MAPK1IP1LQ8NDC0 245 aa6.68□□□□□ -1.34
SCUBE3-201ENST00000274938 TET1Q8NFU7 2136 aa6.68□□□□□ -1.34
SCUBE3-201ENST00000274938 ZNF524Q96C55 264 aa6.68□□□□□ -1.34
SCUBE3-201ENST00000274938 IGLV2-23P01705 113 aa6.68□□□□□ -1.34
SCUBE3-201ENST00000274938 CASC2Q6XLA1 102 aa6.68□□□□□ -1.34
SCUBE3-201ENST00000274938 LYPD6Q86Y78 171 aa6.68□□□□□ -1.34
SCUBE3-201ENST00000274938 C10orf105Q8TEF2 133 aa6.68□□□□□ -1.34
SCUBE3-201ENST00000274938 FAM186AA6NE01 2351 aa6.67□□□□□ -1.34
SCUBE3-201ENST00000274938 PRSS33Q8NF86 280 aa6.67□□□□□ -1.34
SCUBE3-201ENST00000274938 LCTP09848 1927 aa6.67□□□□□ -1.34
SCUBE3-201ENST00000274938 LY6G6EA0A0G2JKS1 128 aa6.67□□□□□ -1.34
SCUBE3-201ENST00000274938 H7C423 109 aa6.67□□□□□ -1.34
SCUBE3-201ENST00000274938 U3KQA8 63 aa6.67□□□□□ -1.34
SCUBE3-201ENST00000274938 TRBV30A0A0K0K1B3 111 aa6.67□□□□□ -1.34
SCUBE3-201ENST00000274938 LYRM9A8MSI8 78 aa6.67□□□□□ -1.34
SCUBE3-201ENST00000274938 NDUFA7O95182 113 aa6.67□□□□□ -1.34
SCUBE3-201ENST00000274938 SDIM1Q6ZPB5 146 aa6.67□□□□□ -1.34
SCUBE3-201ENST00000274938 ALPK2Q86TB3 2170 aa6.67□□□□□ -1.34
SCUBE3-201ENST00000274938 MED12Q93074 2177 aa6.67□□□□□ -1.34
SCUBE3-201ENST00000274938 TNRC6AQ8NDV7 1962 aaKnown RBP6.67□□□□□ -1.34
SCUBE3-201ENST00000274938 SERP2Q8N6R1 65 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 Q8N9W7 124 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 ODF3Q96PU9 254 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 C5orf56Q8N8D9 126 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 C11orf1Q9H5F2 150 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 TEX49A0A1B0GTD5 131 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 TMEM263Q8WUH6 116 aaKnown RBP6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 C14orf177Q52M58 125 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 FANCD2OSQ96PS1 177 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 MLST8Q9BVC4 326 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 NCOR1O75376 2440 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 MYCNOSP40205 109 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 KIR2DL5BQ8NHK3 375 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 RNF138Q8WVD3 245 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 PRO0255Q9UI72 69 aa6.66□□□□□ -1.34
SCUBE3-201ENST00000274938 DEFB136Q30KP8 78 aa6.65□□□□□ -1.34
SCUBE3-201ENST00000274938 NEXN-AS1Q8NBZ9 246 aa6.65□□□□□ -1.34
SCUBE3-201ENST00000274938 SPRY4Q9C004 299 aa6.65□□□□□ -1.34
SCUBE3-201ENST00000274938 F8W735 103 aaPredicted RBP6.65□□□□□ -1.34
SCUBE3-201ENST00000274938 LRRC75A-AS1Q8N1F1 130 aa6.65□□□□□ -1.34
SCUBE3-201ENST00000274938 A0A0J9YX75 114 aa6.65□□□□□ -1.35
SCUBE3-201ENST00000274938 ENHOQ6UWT2 76 aa6.65□□□□□ -1.35
SCUBE3-201ENST00000274938 GREB1Q4ZG55 1949 aa6.65□□□□□ -1.35
SCUBE3-201ENST00000274938 RTTNQ86VV8 2226 aa6.64□□□□□ -1.35
SCUBE3-201ENST00000274938 IGHV4OR15-8A0A075B7B6 117 aa6.64□□□□□ -1.35
SCUBE3-201ENST00000274938 A0A087WW49 117 aa6.64□□□□□ -1.35
SCUBE3-201ENST00000274938 IBA57-AS1B1ANH7 110 aa6.64□□□□□ -1.35
SCUBE3-201ENST00000274938 ZFAND2AQ8N6M9 145 aa6.64□□□□□ -1.35
SCUBE3-201ENST00000274938 RITA1Q96K30 269 aa6.64□□□□□ -1.35
SCUBE3-201ENST00000274938 PHF3Q92576 2039 aaKnown RBP6.64□□□□□ -1.35
SCUBE3-201ENST00000274938 TMEM223A0PJW6 202 aa6.64□□□□□ -1.35
SCUBE3-201ENST00000274938 FAM222AQ5U5X8 452 aa6.64□□□□□ -1.35
SCUBE3-201ENST00000274938 KLK12Q9UKR0 248 aa6.64□□□□□ -1.35
SCUBE3-201ENST00000274938 CEP290O15078 2479 aa6.64□□□□□ -1.35
SCUBE3-201ENST00000274938 C4orf3Q8WVX3 66 aa6.64□□□□□ -1.35
SCUBE3-201ENST00000274938 FRMD6-AS1P0C7T7 363 aa6.63□□□□□ -1.35
SCUBE3-201ENST00000274938 C20orf173Q96LM9 149 aa6.63□□□□□ -1.35
SCUBE3-201ENST00000274938 IGLV1-47P01700 117 aa6.63□□□□□ -1.35
SCUBE3-201ENST00000274938 LOXL1Q08397 574 aaPredicted RBP6.63□□□□□ -1.35
SCUBE3-201ENST00000274938 MYO7BQ6PIF6 2116 aa6.63□□□□□ -1.35
SCUBE3-201ENST00000274938 IGLV2-8P01709 118 aa6.62□□□□□ -1.35
SCUBE3-201ENST00000274938 MRPS36P82909 103 aaKnown RBP6.62□□□□□ -1.35
SCUBE3-201ENST00000274938 LINC00308Q8TCZ7 52 aa6.62□□□□□ -1.35
SCUBE3-201ENST00000274938 TIMM17BO60830 172 aa6.62□□□□□ -1.35
SCUBE3-201ENST00000274938 RBX1P62877 108 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms