RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 CSTL1Q9H114 145 aa8.21□□□□□ -1.1
MSH3-201ENST00000265081 ZC2HC1BQ5TFG8 222 aa8.2□□□□□ -1.1
MSH3-201ENST00000265081 ZFP2Q6ZN57 461 aa8.2□□□□□ -1.1
MSH3-201ENST00000265081 TMEM141Q96I45 108 aa8.2□□□□□ -1.1
MSH3-201ENST00000265081 TRBV25-1A0A075B6N4 114 aa8.2□□□□□ -1.1
MSH3-201ENST00000265081 C9orf118A6NHY6 69 aa8.2□□□□□ -1.1
MSH3-201ENST00000265081 CD7P09564 240 aa8.2□□□□□ -1.1
MSH3-201ENST00000265081 JPT2Q9H910 190 aa8.2□□□□□ -1.1
MSH3-201ENST00000265081 IGKV3-7A0A075B6H7 116 aa8.2□□□□□ -1.1
MSH3-201ENST00000265081 H3BMM0 161 aa8.2□□□□□ -1.1
MSH3-201ENST00000265081 ANKRD17O75179 2603 aaKnown RBP8.2□□□□□ -1.1
MSH3-201ENST00000265081 AKAP6Q13023 2319 aa8.2□□□□□ -1.1
MSH3-201ENST00000265081 MED13LQ71F56 2210 aa8.2□□□□□ -1.1
MSH3-201ENST00000265081 TRGV11A0A075B6L2 103 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 SLURP1P55000 103 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 SCGB3A1Q96QR1 104 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 A6NDN8 102 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 E9PLD3 99 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 VCYO14598 125 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 RHOHQ15669 191 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 SYT8Q8NBV8 401 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 IL17DQ8TAD2 202 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 CHTOPQ9Y3Y2 248 aaKnown RBP8.19□□□□□ -1.1
MSH3-201ENST00000265081 PDZD2O15018 2839 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 A0A1B0GWB2 263 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 MAPKAPK5-AS1Q8N8E1 139 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 DLX4Q92988 240 aaPredicted RBP8.19□□□□□ -1.1
MSH3-201ENST00000265081 PEMTQ9UBM1 199 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 TRAV8-6A0A0B4J262 113 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 MGPP08493 103 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 NMUP48645 174 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 GTSCR1Q86UQ5 136 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 CHAC1Q9BUX1 264 aa8.19□□□□□ -1.1
MSH3-201ENST00000265081 ZANQ9Y493 2812 aa8.18□□□□□ -1.1
MSH3-201ENST00000265081 C16orf95Q9H693 158 aa8.18□□□□□ -1.1
MSH3-201ENST00000265081 TRBV7-3A0A075B6L6 115 aa8.18□□□□□ -1.1
MSH3-201ENST00000265081 TRAV12-2A0A075B6T6 113 aa8.18□□□□□ -1.1
MSH3-201ENST00000265081 PTTG1IPP53801 180 aa8.18□□□□□ -1.1
MSH3-201ENST00000265081 Q6ZSV7 163 aa8.18□□□□□ -1.1
MSH3-201ENST00000265081 SELENOKQ9Y6D0 94 aa8.18□□□□□ -1.1
MSH3-201ENST00000265081 TRAV25A0A0B4J276 109 aa8.17□□□□□ -1.1
MSH3-201ENST00000265081 SPINK13Q1W4C9 94 aa8.17□□□□□ -1.1
MSH3-201ENST00000265081 TRPT1Q86TN4 253 aaKnown RBP8.17□□□□□ -1.1
MSH3-201ENST00000265081 APCP25054 2843 aa8.17□□□□□ -1.1
MSH3-201ENST00000265081 PRSS29PA6NIE9 313 aa8.17□□□□□ -1.1
MSH3-201ENST00000265081 DEFB114Q30KQ6 69 aa8.17□□□□□ -1.1
MSH3-201ENST00000265081 CEND1Q8N111 149 aa8.17□□□□□ -1.1
MSH3-201ENST00000265081 CYSLTR1Q9Y271 337 aa8.17□□□□□ -1.1
MSH3-201ENST00000265081 C11orf72Q8NBR9 251 aa8.17□□□□□ -1.1
MSH3-201ENST00000265081 TMEM160Q9NX00 188 aa8.17□□□□□ -1.1
MSH3-201ENST00000265081 ZNF876PQ49A33 203 aa8.16□□□□□ -1.1
MSH3-201ENST00000265081 FAM104AQ969W3 186 aa8.16□□□□□ -1.1
MSH3-201ENST00000265081 MAP6D1Q9H9H5 199 aa8.16□□□□□ -1.1
MSH3-201ENST00000265081 SDHAF1A6NFY7 115 aa8.16□□□□□ -1.1
MSH3-201ENST00000265081 BEAN1Q3B7T3 259 aa8.16□□□□□ -1.1
MSH3-201ENST00000265081 NFE4Q86UQ8 179 aa8.16□□□□□ -1.1
MSH3-201ENST00000265081 OR11H1Q8NG94 326 aa8.16□□□□□ -1.1
MSH3-201ENST00000265081 CST9LQ9H4G1 147 aa8.16□□□□□ -1.1
MSH3-201ENST00000265081 DNAJC9-AS1A6NH13 148 aa8.15□□□□□ -1.1
MSH3-201ENST00000265081 P0DMU3 169 aa8.15□□□□□ -1.1
MSH3-201ENST00000265081 FAM231AP0DMU4 169 aa8.15□□□□□ -1.1
MSH3-201ENST00000265081 FAM231CP0DMU5 169 aa8.15□□□□□ -1.1
MSH3-201ENST00000265081 OR5A1Q8NGJ0 315 aa8.15□□□□□ -1.1
MSH3-201ENST00000265081 SPTAN1Q13813 2472 aaKnown RBP8.15□□□□□ -1.1
MSH3-201ENST00000265081 NACAE9PAV3 2078 aa8.15□□□□□ -1.1
MSH3-201ENST00000265081 PAPPA-AS1Q5QFB9 102 aa8.15□□□□□ -1.1
MSH3-201ENST00000265081 TMEM61Q8N0U2 210 aa8.15□□□□□ -1.1
MSH3-201ENST00000265081 TTTY13Q9BZ97 58 aa8.15□□□□□ -1.1
MSH3-201ENST00000265081 TP53TG1Q9Y2A0 90 aa8.15□□□□□ -1.1
MSH3-201ENST00000265081 A0A087WWL8 130 aa8.15□□□□□ -1.11
MSH3-201ENST00000265081 MYMXA0A1B0GTQ4 84 aa8.15□□□□□ -1.11
MSH3-201ENST00000265081 C11orf86A6NJI1 115 aa8.15□□□□□ -1.11
MSH3-201ENST00000265081 FXYD2P54710 66 aa8.15□□□□□ -1.11
MSH3-201ENST00000265081 DEFB136Q30KP8 78 aa8.15□□□□□ -1.11
MSH3-201ENST00000265081 DUX5Q96PT3 197 aa8.15□□□□□ -1.11
MSH3-201ENST00000265081 TENM4Q6N022 2769 aa8.15□□□□□ -1.11
MSH3-201ENST00000265081 PMVKQ15126 192 aa8.14□□□□□ -1.11
MSH3-201ENST00000265081 AMMECR1LQ6DCA0 310 aa8.14□□□□□ -1.11
MSH3-201ENST00000265081 ESM1Q9NQ30 184 aa8.14□□□□□ -1.11
MSH3-201ENST00000265081 CRYBA4P53673 196 aa8.14□□□□□ -1.11
MSH3-201ENST00000265081 AMELXQ99217 191 aa8.14□□□□□ -1.11
MSH3-201ENST00000265081 PYGO1Q9Y3Y4 419 aa8.14□□□□□ -1.11
MSH3-201ENST00000265081 RAX2Q96IS3 184 aa8.14□□□□□ -1.11
MSH3-201ENST00000265081 K7EP34 96 aa8.13□□□□□ -1.11
MSH3-201ENST00000265081 KIR2DL4Q99706 377 aa8.13□□□□□ -1.11
MSH3-201ENST00000265081 WFDC11Q8NEX6 87 aa8.13□□□□□ -1.11
MSH3-201ENST00000265081 KMT2BQ9UMN6 2715 aaPredicted RBP8.13□□□□□ -1.11
MSH3-201ENST00000265081 KNCNA6PVL3 124 aa8.13□□□□□ -1.11
MSH3-201ENST00000265081 NEGR1Q7Z3B1 354 aa8.13□□□□□ -1.11
MSH3-201ENST00000265081 A0A1W2PPM0 123 aa8.13□□□□□ -1.11
MSH3-201ENST00000265081 DEFB131AP59861 70 aa8.13□□□□□ -1.11
MSH3-201ENST00000265081 C20orf203Q8NBC4 194 aa8.13□□□□□ -1.11
MSH3-201ENST00000265081 ZNF462Q96JM2 2506 aa8.13□□□□□ -1.11
MSH3-201ENST00000265081 I3L3M4 83 aa8.12□□□□□ -1.11
MSH3-201ENST00000265081 M0R2P5 195 aa8.12□□□□□ -1.11
MSH3-201ENST00000265081 RNASE1P07998 156 aaKnown RBP8.12□□□□□ -1.11
MSH3-201ENST00000265081 A8MWV9 139 aa8.12□□□□□ -1.11
MSH3-201ENST00000265081 FOSL1P15407 271 aa8.12□□□□□ -1.11
MSH3-201ENST00000265081 RPL39P62891 51 aaKnown RBP8.12□□□□□ -1.11
MSH3-201ENST00000265081 VAMP3Q15836 100 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms