RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ZFHX4Q86UP3 3567 aa15.17■□□□□ 0.02
CSPG5-201ENST00000264723 LYRM7Q5U5X0 104 aa15.17■□□□□ 0.02
CSPG5-201ENST00000264723 SLURP1P55000 103 aa15.16■□□□□ 0.02
CSPG5-201ENST00000264723 TOMM7Q9P0U1 55 aa15.16■□□□□ 0.02
CSPG5-201ENST00000264723 CD28P10747 220 aa15.16■□□□□ 0.02
CSPG5-201ENST00000264723 C11orf21Q9P2W6 132 aa15.16■□□□□ 0.02
CSPG5-201ENST00000264723 ZZEF1O43149 2961 aa15.15■□□□□ 0.02
CSPG5-201ENST00000264723 PRSS29PA6NIE9 313 aa15.15■□□□□ 0.02
CSPG5-201ENST00000264723 F8VRH5 84 aa15.15■□□□□ 0.02
CSPG5-201ENST00000264723 DEFB113Q30KQ7 82 aa15.15■□□□□ 0.02
CSPG5-201ENST00000264723 MEIG1Q5JSS6 88 aa15.15■□□□□ 0.02
CSPG5-201ENST00000264723 SH2D6Q7Z4S9 175 aa15.15■□□□□ 0.02
CSPG5-201ENST00000264723 PAX2Q02962 417 aa15.15■□□□□ 0.02
CSPG5-201ENST00000264723 LINC01559Q495D7 138 aa15.15■□□□□ 0.02
CSPG5-201ENST00000264723 LINC01549A6NIU2 74 aa15.14■□□□□ 0.01
CSPG5-201ENST00000264723 C2orf91Q6ZV80 131 aa15.14■□□□□ 0.01
CSPG5-201ENST00000264723 SDHAF1A6NFY7 115 aa15.14■□□□□ 0.01
CSPG5-201ENST00000264723 IGLC6P0CF74 106 aa15.14■□□□□ 0.01
CSPG5-201ENST00000264723 HLA-DRB4P13762 266 aa15.14■□□□□ 0.01
CSPG5-201ENST00000264723 HLA-DRB4X5D2U9 266 aa15.14■□□□□ 0.01
CSPG5-201ENST00000264723 VCYO14598 125 aa15.13■□□□□ 0.01
CSPG5-201ENST00000264723 CDKN1BP46527 198 aa15.13■□□□□ 0.01
CSPG5-201ENST00000264723 RNASE13Q5GAN3 156 aaKnown RBP15.13■□□□□ 0.01
CSPG5-201ENST00000264723 CEND1Q8N111 149 aa15.13■□□□□ 0.01
CSPG5-201ENST00000264723 C10orf99Q6UWK7 81 aa15.13■□□□□ 0.01
CSPG5-201ENST00000264723 A0A087WX48 190 aa15.13■□□□□ 0.01
CSPG5-201ENST00000264723 LINC01619G3V211 115 aa15.13■□□□□ 0.01
CSPG5-201ENST00000264723 J3QKU1 62 aa15.12■□□□□ 0.01
CSPG5-201ENST00000264723 J3QLI3 93 aa15.12■□□□□ 0.01
CSPG5-201ENST00000264723 IGHG2P01859 326 aa15.12■□□□□ 0.01
CSPG5-201ENST00000264723 MRAP2Q96G30 205 aa15.12■□□□□ 0.01
CSPG5-201ENST00000264723 TRBV6-1A0A0K0K1D8 114 aa15.12■□□□□ 0.01
CSPG5-201ENST00000264723 CFHR3Q02985 330 aa15.12■□□□□ 0.01
CSPG5-201ENST00000264723 C16orf54Q6UWD8 224 aa15.12■□□□□ 0.01
CSPG5-201ENST00000264723 SPXQ9BT56 116 aa15.12■□□□□ 0.01
CSPG5-201ENST00000264723 TRGV4A0A0C4DH28 118 aa15.12■□□□□ 0.01
CSPG5-201ENST00000264723 TEX48A0A1B0GUV7 120 aa15.12■□□□□ 0.01
CSPG5-201ENST00000264723 RPL39P62891 51 aaKnown RBP15.12■□□□□ 0.01
CSPG5-201ENST00000264723 RNF185Q96GF1 192 aa15.11■□□□□ 0.01
CSPG5-201ENST00000264723 ADARB2-AS1A8MUL3 147 aa15.11■□□□□ 0.01
CSPG5-201ENST00000264723 ELANEP08246 267 aa15.11■□□□□ 0.01
CSPG5-201ENST00000264723 C12orf74Q32Q52 190 aa15.11■□□□□ 0.01
CSPG5-201ENST00000264723 IGHV1OR15-1A0A075B7D0 117 aa15.1■□□□□ 0.01
CSPG5-201ENST00000264723 MYMXA0A1B0GTQ4 84 aa15.1■□□□□ 0.01
CSPG5-201ENST00000264723 F8W735 103 aaPredicted RBP15.1■□□□□ 0.01
CSPG5-201ENST00000264723 MRPS12O15235 138 aaKnown RBP15.1■□□□□ 0.01
CSPG5-201ENST00000264723 Q6ZS46 218 aa15.1■□□□□ 0.01
CSPG5-201ENST00000264723 APRG1Q8IVJ8 170 aa15.1■□□□□ 0.01
CSPG5-201ENST00000264723 LAMA5O15230 3695 aa15.1■□□□□ 0.01
CSPG5-201ENST00000264723 HECTD1Q9ULT8 2610 aa15.1■□□□□ 0.01
CSPG5-201ENST00000264723 LRBAP50851 2863 aa15.1■□□□□ 0.01
CSPG5-201ENST00000264723 RBX1P62877 108 aa15.1■□□□□ 0.01
CSPG5-201ENST00000264723 WFDC2Q14508 124 aa15.1■□□□□ 0.01
CSPG5-201ENST00000264723 IGHV3-38A0A0C4DH36 116 aa15.09■□□□□ 0.01
CSPG5-201ENST00000264723 IGHV4OR15-8A0A075B7B6 117 aa15.09■□□□□ 0.01
CSPG5-201ENST00000264723 A0A087WW49 117 aa15.09■□□□□ 0.01
CSPG5-201ENST00000264723 C20orf173Q96LM9 149 aa15.09■□□□□ 0.01
CSPG5-201ENST00000264723 ZFAND3Q9H8U3 227 aa15.09■□□□□ 0.01
CSPG5-201ENST00000264723 TSSC4Q9Y5U2 329 aaPredicted RBP15.09■□□□□ 0.01
CSPG5-201ENST00000264723 A0A096LNJ9 63 aa15.08■□□□□ 0
CSPG5-201ENST00000264723 ZNF415Q09FC8 603 aa15.08■□□□□ 0
CSPG5-201ENST00000264723 SIGMAR1Q99720 223 aa15.08■□□□□ 0
CSPG5-201ENST00000264723 FGF6P10767 208 aa15.08■□□□□ 0
CSPG5-201ENST00000264723 MAPKAPK5-AS1Q8N8E1 139 aa15.07■□□□□ 0
CSPG5-201ENST00000264723 DEFB130BP0DP73 79 aa15.07■□□□□ 0
CSPG5-201ENST00000264723 DEFB130AP0DP74 79 aa15.07■□□□□ 0
CSPG5-201ENST00000264723 RBAKDNA6NC62 111 aa15.07■□□□□ 0
CSPG5-201ENST00000264723 A6NDX4 124 aa15.07■□□□□ 0
CSPG5-201ENST00000264723 PRR9Q5T870 116 aa15.06■□□□□ 0
CSPG5-201ENST00000264723 H3BUA1 57 aa15.06■□□□□ 0
CSPG5-201ENST00000264723 SIVA1O15304 175 aa15.06■□□□□ 0
CSPG5-201ENST00000264723 INSP01308 110 aa15.06■□□□□ 0
CSPG5-201ENST00000264723 LGALS1P09382 135 aaKnown RBP15.06■□□□□ 0
CSPG5-201ENST00000264723 EBI3Q14213 229 aa15.06■□□□□ 0
CSPG5-201ENST00000264723 OPRPNQ99935 248 aaPredicted RBP15.05■□□□□ 0
CSPG5-201ENST00000264723 TRAV8-2A0A0B4J237 113 aa15.05■□□□□ -0
CSPG5-201ENST00000264723 GATD1Q8NB37 220 aa15.05■□□□□ -0
CSPG5-201ENST00000264723 ZNF625Q96I27 306 aaPredicted RBP15.05■□□□□ -0
CSPG5-201ENST00000264723 ZNF48Q96MX3 618 aaPredicted RBP15.05■□□□□ -0
CSPG5-201ENST00000264723 AGRNO00468 2067 aa15.04■□□□□ -0
CSPG5-201ENST00000264723 CHCHD5Q9BSY4 110 aa15.04■□□□□ -0
CSPG5-201ENST00000264723 RPL13AP40429 203 aaKnown RBP15.04■□□□□ -0
CSPG5-201ENST00000264723 C9orf47Q6ZRZ4 202 aa15.04■□□□□ -0
CSPG5-201ENST00000264723 CIRBPQ14011 172 aaKnown RBP15.03■□□□□ -0
CSPG5-201ENST00000264723 TMEM101Q96IK0 257 aa15.03■□□□□ -0
CSPG5-201ENST00000264723 IGLL5B9A064 214 aa15.03■□□□□ -0
CSPG5-201ENST00000264723 AVPP01185 164 aa15.03■□□□□ -0
CSPG5-201ENST00000264723 TRAV13-1A0A0B4J241 112 aa15.02■□□□□ -0
CSPG5-201ENST00000264723 PMVKQ15126 192 aa15.02■□□□□ -0
CSPG5-201ENST00000264723 Q8N6K4 173 aa15.01□□□□□ -0.01
CSPG5-201ENST00000264723 WFDC11Q8NEX6 87 aa15.01□□□□□ -0.01
CSPG5-201ENST00000264723 DLX4Q92988 240 aaPredicted RBP15.01□□□□□ -0.01
CSPG5-201ENST00000264723 MDFICQ9P1T7 246 aa15.01□□□□□ -0.01
CSPG5-201ENST00000264723 U3KQK5 164 aa15.01□□□□□ -0.01
CSPG5-201ENST00000264723 SUMO4Q6EEV6 95 aa15□□□□□ -0.01
CSPG5-201ENST00000264723 CLPSL1A2RUU4 121 aa15□□□□□ -0.01
CSPG5-201ENST00000264723 COX6CP09669 75 aa15□□□□□ -0.01
CSPG5-201ENST00000264723 MRPL53Q96EL3 112 aaKnown RBP15□□□□□ -0.01
CSPG5-201ENST00000264723 EDN2P20800 178 aa15□□□□□ -0.01
CSPG5-201ENST00000264723 RPL36AP83881 106 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms