RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 MAPK1IP1LQ8NDC0 245 aa14.7□□□□□ -0.06
NEIL3-201ENST00000264596 MDFICQ9P1T7 246 aa14.7□□□□□ -0.06
NEIL3-201ENST00000264596 ZNF815PA8K554 130 aa14.7□□□□□ -0.06
NEIL3-201ENST00000264596 POLR2KP53803 58 aaKnown RBP14.7□□□□□ -0.06
NEIL3-201ENST00000264596 CD300EQ496F6 205 aaPredicted RBP14.7□□□□□ -0.06
NEIL3-201ENST00000264596 SIGMAR1Q99720 223 aa14.7□□□□□ -0.06
NEIL3-201ENST00000264596 DUX5Q96PT3 197 aa14.69□□□□□ -0.06
NEIL3-201ENST00000264596 GTSF1LQ9H1H1 148 aa14.69□□□□□ -0.06
NEIL3-201ENST00000264596 IGHV3-16A0A0C4DH30 117 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 SDHAF1A6NFY7 115 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 SYNJ2BPP57105 145 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 SNRPD3P62318 126 aaKnown RBP14.68□□□□□ -0.06
NEIL3-201ENST00000264596 FOXI2Q6ZQN5 318 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 KIR2DL4Q99706 377 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 A0A0J9YX75 114 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 C11orf86A6NJI1 115 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 VCYO14598 125 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 SPINK13Q1W4C9 94 aa14.68□□□□□ -0.06
NEIL3-201ENST00000264596 IGIPA6NJ69 53 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 GATA3P23771 443 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 PLEKHB2Q96CS7 222 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 ZNF256Q9Y2P7 627 aaPredicted RBP14.67□□□□□ -0.06
NEIL3-201ENST00000264596 DOPEY1Q5JWR5 2465 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 IGLV4-69A0A075B6H9 119 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 RPL32P62910 135 aaKnown RBP14.67□□□□□ -0.06
NEIL3-201ENST00000264596 ZNF56Q15929 161 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 SCGB1D4Q6XE38 83 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 Q8N1Y9 231 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 KLHL30-AS1Q8NEE0 82 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 ZNF580Q9UK33 172 aa14.67□□□□□ -0.06
NEIL3-201ENST00000264596 USP9XQ93008 2570 aaPredicted RBP14.67□□□□□ -0.06
NEIL3-201ENST00000264596 LINC01356Q8N9X3 169 aa14.66□□□□□ -0.06
NEIL3-201ENST00000264596 C9orf85Q96MD7 179 aa14.66□□□□□ -0.06
NEIL3-201ENST00000264596 LINC01619G3V211 115 aa14.66□□□□□ -0.06
NEIL3-201ENST00000264596 K7EQG2 157 aa14.66□□□□□ -0.06
NEIL3-201ENST00000264596 SMAGPQ0VAQ4 97 aa14.66□□□□□ -0.06
NEIL3-201ENST00000264596 SPANXB1Q9NS25 103 aaPredicted RBP14.66□□□□□ -0.06
NEIL3-201ENST00000264596 PMVKQ15126 192 aa14.65□□□□□ -0.06
NEIL3-201ENST00000264596 TSSC4Q9Y5U2 329 aaPredicted RBP14.65□□□□□ -0.06
NEIL3-201ENST00000264596 GAGE12HA6NDE8 117 aa14.65□□□□□ -0.06
NEIL3-201ENST00000264596 LGALS9O00182 355 aa14.65□□□□□ -0.06
NEIL3-201ENST00000264596 TGFAP01135 160 aa14.65□□□□□ -0.06
NEIL3-201ENST00000264596 RRN3P1Q2M238 152 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 AMTNQ6UX39 209 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 SPATA25Q9BR10 227 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 DOPEY2Q9Y3R5 2298 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 F8W1H4 67 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 H3BMG7 143 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 COX6B1P14854 86 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 DSCR9P59020 149 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 SYT8Q8NBV8 401 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 ODF3Q96PU9 254 aa14.64□□□□□ -0.07
NEIL3-201ENST00000264596 IGHV1OR15-1A0A075B7D0 117 aa14.63□□□□□ -0.07
NEIL3-201ENST00000264596 MORN3Q6PF18 240 aaPredicted RBP14.63□□□□□ -0.07
NEIL3-201ENST00000264596 TMEM141Q96I45 108 aa14.63□□□□□ -0.07
NEIL3-201ENST00000264596 TRBV27A0A0K0K1C4 114 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 A0A1B0GV72 72 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 SRSF9Q13242 221 aaKnown RBP eCLIP14.62□□□□□ -0.07
NEIL3-201ENST00000264596 SVIPQ8NHG7 77 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 A0A1B0GWB2 263 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 HERVK_113P61574 105 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 WFDC2Q14508 124 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 IGSF10Q6WRI0 2623 aa14.62□□□□□ -0.07
NEIL3-201ENST00000264596 PIEZO1Q92508 2521 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 J3QR89 54 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 M0QY20 66 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 HOXA3O43365 443 aaPredicted RBP14.61□□□□□ -0.07
NEIL3-201ENST00000264596 TMEM170BQ5T4T1 132 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 TIMM17AQ99595 171 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 TRBV6-5A0A0K0K1A5 114 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 TMEM89A2RUT3 159 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 HOXD3P31249 432 aaPredicted RBP14.61□□□□□ -0.07
NEIL3-201ENST00000264596 PAPPA-AS1Q5QFB9 102 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 MTURNQ8N3F0 131 aa14.61□□□□□ -0.07
NEIL3-201ENST00000264596 LINC01549A6NIU2 74 aa14.6□□□□□ -0.07
NEIL3-201ENST00000264596 OPRPNQ99935 248 aaPredicted RBP14.6□□□□□ -0.07
NEIL3-201ENST00000264596 SORL1Q92673 2214 aa14.6□□□□□ -0.07
NEIL3-201ENST00000264596 ZNRF2Q8NHG8 242 aa14.6□□□□□ -0.07
NEIL3-201ENST00000264596 ZNF876PQ49A33 203 aa14.59□□□□□ -0.07
NEIL3-201ENST00000264596 PGPEP1Q9NXJ5 209 aa14.59□□□□□ -0.07
NEIL3-201ENST00000264596 HTN1P15515 57 aa14.58□□□□□ -0.07
NEIL3-201ENST00000264596 VPREB3Q9UKI3 123 aa14.58□□□□□ -0.07
NEIL3-201ENST00000264596 ZANQ9Y493 2812 aa14.58□□□□□ -0.08
NEIL3-201ENST00000264596 A0A096LNT2 108 aa14.58□□□□□ -0.08
NEIL3-201ENST00000264596 TSPEAR-AS2P59090 65 aa14.58□□□□□ -0.08
NEIL3-201ENST00000264596 SPAG8Q99932 426 aaPredicted RBP14.58□□□□□ -0.08
NEIL3-201ENST00000264596 TRPT1Q86TN4 253 aaKnown RBP14.57□□□□□ -0.08
NEIL3-201ENST00000264596 MRPL16Q9NX20 251 aaKnown RBP14.57□□□□□ -0.08
NEIL3-201ENST00000264596 ZNF702PQ9H963 129 aa14.57□□□□□ -0.08
NEIL3-201ENST00000264596 BEX4Q9NWD9 120 aaPredicted RBP14.57□□□□□ -0.08
NEIL3-201ENST00000264596 USP9YO00507 2555 aaPredicted RBP14.57□□□□□ -0.08
NEIL3-201ENST00000264596 TMEM238LA0A1B0GVL6 79 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 A6NJY4 79 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 CLUHP3Q96NS8 147 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 ANKRD17O75179 2603 aaKnown RBP14.56□□□□□ -0.08
NEIL3-201ENST00000264596 A0A0J9YY99 117 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 KNCNA6PVL3 124 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 J3QLI3 93 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 DEFB136Q30KP8 78 aa14.56□□□□□ -0.08
NEIL3-201ENST00000264596 ETDBQ3ZM63 59 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 397.2 ms