RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 SAMD13Q5VXD3 122 aa12.37□□□□□ -0.43
ZNF541-201ENST00000263351 HIST2H2BDQ6DRA6 164 aa12.37□□□□□ -0.43
ZNF541-201ENST00000263351 SUMO4Q6EEV6 95 aa12.37□□□□□ -0.43
ZNF541-201ENST00000263351 ARL17AQ8IVW1 177 aa12.37□□□□□ -0.43
ZNF541-201ENST00000263351 ZNF580Q9UK33 172 aa12.37□□□□□ -0.43
ZNF541-201ENST00000263351 IGHV1-69DA0A0B4J2H0 117 aa12.37□□□□□ -0.43
ZNF541-201ENST00000263351 IGHV1-69P01742 117 aa12.37□□□□□ -0.43
ZNF541-201ENST00000263351 GAGE13Q4V321 117 aa12.37□□□□□ -0.43
ZNF541-201ENST00000263351 COX6B1P14854 86 aa12.36□□□□□ -0.43
ZNF541-201ENST00000263351 SRSF9Q13242 221 aaKnown RBP eCLIP12.36□□□□□ -0.43
ZNF541-201ENST00000263351 ZNF418Q8TF45 676 aaPredicted RBP12.36□□□□□ -0.43
ZNF541-201ENST00000263351 MDFICQ9P1T7 246 aa12.36□□□□□ -0.43
ZNF541-201ENST00000263351 KIF25-AS1Q9Y6Z4 181 aa12.36□□□□□ -0.43
ZNF541-201ENST00000263351 A0A1B0GWB2 263 aa12.36□□□□□ -0.43
ZNF541-201ENST00000263351 GAGE12HA6NDE8 117 aa12.36□□□□□ -0.43
ZNF541-201ENST00000263351 AVPP01185 164 aa12.36□□□□□ -0.43
ZNF541-201ENST00000263351 CD7P09564 240 aa12.36□□□□□ -0.43
ZNF541-201ENST00000263351 ZNF688P0C7X2 276 aa12.36□□□□□ -0.43
ZNF541-201ENST00000263351 CLEC2AQ6UVW9 174 aa12.36□□□□□ -0.43
ZNF541-201ENST00000263351 NRGNQ92686 78 aa12.36□□□□□ -0.43
ZNF541-201ENST00000263351 DUX5Q96PT3 197 aa12.36□□□□□ -0.43
ZNF541-201ENST00000263351 NACAE9PAV3 2078 aa12.36□□□□□ -0.43
ZNF541-201ENST00000263351 HOXA3O43365 443 aaPredicted RBP12.35□□□□□ -0.43
ZNF541-201ENST00000263351 ZNRF2Q8NHG8 242 aa12.35□□□□□ -0.43
ZNF541-201ENST00000263351 FAM19A4Q96LR4 140 aa12.35□□□□□ -0.43
ZNF541-201ENST00000263351 SETD2Q9BYW2 2564 aaPredicted RBP12.35□□□□□ -0.43
ZNF541-201ENST00000263351 FAM223BA6NKX1 122 aa12.35□□□□□ -0.43
ZNF541-201ENST00000263351 NDUFA4O00483 81 aa12.35□□□□□ -0.43
ZNF541-201ENST00000263351 FAM223AQ8IWN6 122 aa12.35□□□□□ -0.43
ZNF541-201ENST00000263351 FAM208BQ5VWN6 2430 aa12.35□□□□□ -0.43
ZNF541-201ENST00000263351 TSPAN13O95857 204 aa12.34□□□□□ -0.43
ZNF541-201ENST00000263351 PSMB2P49721 201 aa12.34□□□□□ -0.43
ZNF541-201ENST00000263351 OVOL1O14753 267 aa12.34□□□□□ -0.43
ZNF541-201ENST00000263351 FHL3Q13643 280 aa12.34□□□□□ -0.43
ZNF541-201ENST00000263351 TMEM170BQ5T4T1 132 aa12.34□□□□□ -0.43
ZNF541-201ENST00000263351 NFE4Q86UQ8 179 aa12.34□□□□□ -0.43
ZNF541-201ENST00000263351 GNLYP22749 145 aa12.33□□□□□ -0.43
ZNF541-201ENST00000263351 ABCA12Q86UK0 2595 aa12.33□□□□□ -0.44
ZNF541-201ENST00000263351 F8W1H4 67 aa12.33□□□□□ -0.44
ZNF541-201ENST00000263351 ZNF469Q96JG9 3925 aaPredicted RBP12.33□□□□□ -0.44
ZNF541-201ENST00000263351 C2CD3Q4AC94 2353 aa12.33□□□□□ -0.44
ZNF541-201ENST00000263351 TAL2Q16559 108 aa12.32□□□□□ -0.44
ZNF541-201ENST00000263351 IGSF10Q6WRI0 2623 aa12.32□□□□□ -0.44
ZNF541-201ENST00000263351 SDHAF1A6NFY7 115 aa12.32□□□□□ -0.44
ZNF541-201ENST00000263351 IGIPA6NJ69 53 aa12.32□□□□□ -0.44
ZNF541-201ENST00000263351 HTN1P15515 57 aa12.32□□□□□ -0.44
ZNF541-201ENST00000263351 NF1P21359 2839 aa12.32□□□□□ -0.44
ZNF541-201ENST00000263351 ACACBO00763 2458 aa12.32□□□□□ -0.44
ZNF541-201ENST00000263351 IGHV3-73A0A0B4J1V6 119 aa12.31□□□□□ -0.44
ZNF541-201ENST00000263351 MAPK1IP1LQ8NDC0 245 aa12.31□□□□□ -0.44
ZNF541-201ENST00000263351 IGHV4-30-2A0A087WSY4 118 aa12.31□□□□□ -0.44
ZNF541-201ENST00000263351 PSMG4Q5JS54 123 aa12.31□□□□□ -0.44
ZNF541-201ENST00000263351 FAM159AQ6UWV7 190 aa12.31□□□□□ -0.44
ZNF541-201ENST00000263351 Q9UF83 564 aa12.31□□□□□ -0.44
ZNF541-201ENST00000263351 A0A0J9YY99 117 aa12.3□□□□□ -0.44
ZNF541-201ENST00000263351 SIGMAR1Q99720 223 aa12.3□□□□□ -0.44
ZNF541-201ENST00000263351 LENEPQ9Y5L5 61 aa12.3□□□□□ -0.44
ZNF541-201ENST00000263351 TEX15Q9BXT5 2789 aa12.3□□□□□ -0.44
ZNF541-201ENST00000263351 ADARB2-AS1A8MUL3 147 aa12.3□□□□□ -0.44
ZNF541-201ENST00000263351 H7C2G1 150 aa12.3□□□□□ -0.44
ZNF541-201ENST00000263351 P0DMU3 169 aa12.3□□□□□ -0.44
ZNF541-201ENST00000263351 FAM231AP0DMU4 169 aa12.3□□□□□ -0.44
ZNF541-201ENST00000263351 FAM231CP0DMU5 169 aa12.3□□□□□ -0.44
ZNF541-201ENST00000263351 SPINK13Q1W4C9 94 aa12.3□□□□□ -0.44
ZNF541-201ENST00000263351 RNASE13Q5GAN3 156 aaKnown RBP12.3□□□□□ -0.44
ZNF541-201ENST00000263351 ANKRD17O75179 2603 aaKnown RBP12.3□□□□□ -0.44
ZNF541-201ENST00000263351 EIF4EBP3O60516 100 aaPredicted RBP12.29□□□□□ -0.44
ZNF541-201ENST00000263351 POLR2KP53803 58 aaKnown RBP12.29□□□□□ -0.44
ZNF541-201ENST00000263351 DCANP1Q8TF63 244 aa12.29□□□□□ -0.44
ZNF541-201ENST00000263351 IGHG2P01859 326 aa12.29□□□□□ -0.44
ZNF541-201ENST00000263351 PROK1P58294 105 aa12.29□□□□□ -0.44
ZNF541-201ENST00000263351 ZNF56Q15929 161 aa12.29□□□□□ -0.44
ZNF541-201ENST00000263351 WNK1Q9H4A3 2382 aa12.29□□□□□ -0.44
ZNF541-201ENST00000263351 PIEZO1Q92508 2521 aa12.29□□□□□ -0.44
ZNF541-201ENST00000263351 KLLNB2CW77 178 aa12.28□□□□□ -0.44
ZNF541-201ENST00000263351 DAZ1Q9NQZ3 744 aaKnown RBP12.28□□□□□ -0.44
ZNF541-201ENST00000263351 CHD6Q8TD26 2715 aa12.28□□□□□ -0.44
ZNF541-201ENST00000263351 EPG5Q9HCE0 2579 aa12.28□□□□□ -0.44
ZNF541-201ENST00000263351 SONP18583 2426 aaKnown RBP12.28□□□□□ -0.44
ZNF541-201ENST00000263351 UBE2D1P51668 147 aa12.28□□□□□ -0.44
ZNF541-201ENST00000263351 CEMP1Q6PRD7 247 aaPredicted RBP12.28□□□□□ -0.44
ZNF541-201ENST00000263351 Q8N1Y9 231 aa12.28□□□□□ -0.44
ZNF541-201ENST00000263351 RAX2Q96IS3 184 aa12.28□□□□□ -0.44
ZNF541-201ENST00000263351 LRRK2Q5S007 2527 aa12.28□□□□□ -0.44
ZNF541-201ENST00000263351 TCL1BO95988 128 aa12.27□□□□□ -0.44
ZNF541-201ENST00000263351 CFAP126Q5VTH2 177 aa12.27□□□□□ -0.44
ZNF541-201ENST00000263351 NDUFS8O00217 210 aa12.27□□□□□ -0.45
ZNF541-201ENST00000263351 CFC1BP0CG36 223 aa12.27□□□□□ -0.45
ZNF541-201ENST00000263351 CFC1P0CG37 223 aa12.27□□□□□ -0.45
ZNF541-201ENST00000263351 PTPN13Q12923 2485 aa12.27□□□□□ -0.45
ZNF541-201ENST00000263351 A6NDX4 124 aa12.26□□□□□ -0.45
ZNF541-201ENST00000263351 PMVKQ15126 192 aa12.26□□□□□ -0.45
ZNF541-201ENST00000263351 NDUFA11Q86Y39 141 aa12.26□□□□□ -0.45
ZNF541-201ENST00000263351 SYT8Q8NBV8 401 aa12.26□□□□□ -0.45
ZNF541-201ENST00000263351 AMELXQ99217 191 aa12.26□□□□□ -0.45
ZNF541-201ENST00000263351 KIR2DL4Q99706 377 aa12.26□□□□□ -0.45
ZNF541-201ENST00000263351 DOPEY1Q5JWR5 2465 aa12.26□□□□□ -0.45
ZNF541-201ENST00000263351 CRIP2P52943 208 aaPredicted RBP12.26□□□□□ -0.45
ZNF541-201ENST00000263351 APRG1Q8IVJ8 170 aa12.26□□□□□ -0.45
ZNF541-201ENST00000263351 IGHV4-59P01825 116 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms