RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 C14orf178Q8N769 122 aaPredicted RBP8.16□□□□□ -1.1
TRAF4-202ENST00000262396 BAALCQ8WXS3 180 aa8.16□□□□□ -1.1
TRAF4-202ENST00000262396 RPL36ALQ969Q0 106 aaKnown RBP8.16□□□□□ -1.1
TRAF4-202ENST00000262396 FMC1Q96HJ9 113 aa8.16□□□□□ -1.1
TRAF4-202ENST00000262396 SAMD10Q9BYL1 202 aa8.16□□□□□ -1.1
TRAF4-202ENST00000262396 JPT2Q9H910 190 aa8.16□□□□□ -1.1
TRAF4-202ENST00000262396 MAP1LC3B2A6NCE7 125 aa8.15□□□□□ -1.1
TRAF4-202ENST00000262396 FAM74A7A6NL05 159 aa8.15□□□□□ -1.1
TRAF4-202ENST00000262396 AKR1C3P42330 323 aa8.15□□□□□ -1.1
TRAF4-202ENST00000262396 ZFP82Q8N141 532 aa8.15□□□□□ -1.1
TRAF4-202ENST00000262396 UBE2WQ96B02 151 aa8.15□□□□□ -1.1
TRAF4-202ENST00000262396 MAP1LC3BQ9GZQ8 125 aa8.15□□□□□ -1.1
TRAF4-202ENST00000262396 KLK12Q9UKR0 248 aa8.15□□□□□ -1.1
TRAF4-202ENST00000262396 KRBOX1C9JBD0 128 aa8.14□□□□□ -1.11
TRAF4-202ENST00000262396 CRPP02741 224 aa8.14□□□□□ -1.11
TRAF4-202ENST00000262396 C1QBP02746 253 aa8.14□□□□□ -1.11
TRAF4-202ENST00000262396 Q5BKY6 102 aa8.14□□□□□ -1.11
TRAF4-202ENST00000262396 Q8N3U1 123 aa8.14□□□□□ -1.11
TRAF4-202ENST00000262396 Q8N976 141 aa8.14□□□□□ -1.11
TRAF4-202ENST00000262396 ZC2HC1AQ96GY0 325 aa8.14□□□□□ -1.11
TRAF4-202ENST00000262396 ARPC5O15511 151 aa8.13□□□□□ -1.11
TRAF4-202ENST00000262396 PFDN1O60925 122 aa8.13□□□□□ -1.11
TRAF4-202ENST00000262396 ZNF56Q15929 161 aa8.13□□□□□ -1.11
TRAF4-202ENST00000262396 ZNF726P1Q15940 193 aa8.13□□□□□ -1.11
TRAF4-202ENST00000262396 RNF222A6NCQ9 220 aa8.12□□□□□ -1.11
TRAF4-202ENST00000262396 F5H697 171 aa8.12□□□□□ -1.11
TRAF4-202ENST00000262396 NIT1Q86X76 327 aa8.12□□□□□ -1.11
TRAF4-202ENST00000262396 SFRP2Q96HF1 295 aa8.12□□□□□ -1.11
TRAF4-202ENST00000262396 TCEAL7Q9BRU2 100 aa8.12□□□□□ -1.11
TRAF4-202ENST00000262396 FAM30AQ9NZY2 134 aa8.12□□□□□ -1.11
TRAF4-202ENST00000262396 DMBT1Q9UGM3 2413 aaPredicted RBP8.12□□□□□ -1.11
TRAF4-202ENST00000262396 TRBV10-1A0A0K0K1A3 114 aa8.11□□□□□ -1.11
TRAF4-202ENST00000262396 A0A1B0GV50 99 aa8.11□□□□□ -1.11
TRAF4-202ENST00000262396 SMIM17P0DL12 118 aa8.11□□□□□ -1.11
TRAF4-202ENST00000262396 SSTP61278 116 aa8.11□□□□□ -1.11
TRAF4-202ENST00000262396 Q0VG73 95 aa8.11□□□□□ -1.11
TRAF4-202ENST00000262396 WFDC2Q14508 124 aa8.11□□□□□ -1.11
TRAF4-202ENST00000262396 C14orf177Q52M58 125 aa8.11□□□□□ -1.11
TRAF4-202ENST00000262396 LINC00528Q8N1L1 170 aa8.11□□□□□ -1.11
TRAF4-202ENST00000262396 C1orf43Q9BWL3 253 aa8.11□□□□□ -1.11
TRAF4-202ENST00000262396 TRBV7-3A0A075B6L6 115 aa8.1□□□□□ -1.11
TRAF4-202ENST00000262396 PAGE4O60829 102 aa8.1□□□□□ -1.11
TRAF4-202ENST00000262396 S100A9P06702 114 aaKnown RBP8.1□□□□□ -1.11
TRAF4-202ENST00000262396 LINC00694P0DN24 101 aa8.1□□□□□ -1.11
TRAF4-202ENST00000262396 CRIP1P50238 77 aa8.1□□□□□ -1.11
TRAF4-202ENST00000262396 LINC01559Q495D7 138 aa8.1□□□□□ -1.11
TRAF4-202ENST00000262396 DNLZQ5SXM8 178 aa8.1□□□□□ -1.11
TRAF4-202ENST00000262396 SPANXN1Q5VSR9 72 aa8.1□□□□□ -1.11
TRAF4-202ENST00000262396 FAM213BQ8TBF2 198 aa8.1□□□□□ -1.11
TRAF4-202ENST00000262396 SFT2D1Q8WV19 159 aa8.1□□□□□ -1.11
TRAF4-202ENST00000262396 CHCHD5Q9BSY4 110 aa8.1□□□□□ -1.11
TRAF4-202ENST00000262396 CHCHD7Q9BUK0 85 aa8.1□□□□□ -1.11
TRAF4-202ENST00000262396 ZNF471Q9BX82 626 aaPredicted RBP8.1□□□□□ -1.11
TRAF4-202ENST00000262396 Q9UF83 564 aa8.1□□□□□ -1.11
TRAF4-202ENST00000262396 FAT1Q14517 4588 aa8.09□□□□□ -1.11
TRAF4-202ENST00000262396 ANGP03950 147 aaKnown RBP8.09□□□□□ -1.11
TRAF4-202ENST00000262396 FHITP49789 147 aa8.09□□□□□ -1.11
TRAF4-202ENST00000262396 PKIAP61925 76 aa8.09□□□□□ -1.11
TRAF4-202ENST00000262396 ZNF674Q2M3X9 581 aa8.09□□□□□ -1.11
TRAF4-202ENST00000262396 LINC01620Q4KN68 170 aa8.09□□□□□ -1.11
TRAF4-202ENST00000262396 PRR27Q6MZM9 219 aa8.09□□□□□ -1.11
TRAF4-202ENST00000262396 UFSP1Q6NVU6 142 aa8.09□□□□□ -1.11
TRAF4-202ENST00000262396 C15orf54Q8N8G6 183 aa8.09□□□□□ -1.11
TRAF4-202ENST00000262396 LTAP01374 205 aa8.08□□□□□ -1.12
TRAF4-202ENST00000262396 RAB4BP61018 213 aa8.08□□□□□ -1.12
TRAF4-202ENST00000262396 BAGE2Q86Y30 109 aa8.08□□□□□ -1.12
TRAF4-202ENST00000262396 DEFB104AQ8WTQ1 72 aa8.08□□□□□ -1.12
TRAF4-202ENST00000262396 HERC1Q15751 4861 aa8.07□□□□□ -1.12
TRAF4-202ENST00000262396 TRBV6-1A0A0K0K1D8 114 aa8.07□□□□□ -1.12
TRAF4-202ENST00000262396 HLA-DQA1P01909 254 aa8.07□□□□□ -1.12
TRAF4-202ENST00000262396 UBE2D3P61077 147 aa8.07□□□□□ -1.12
TRAF4-202ENST00000262396 UBE2D2P62837 147 aa8.07□□□□□ -1.12
TRAF4-202ENST00000262396 TMEM97Q5BJF2 176 aa8.07□□□□□ -1.12
TRAF4-202ENST00000262396 COX8CQ7Z4L0 72 aa8.07□□□□□ -1.12
TRAF4-202ENST00000262396 TPPP3Q9BW30 176 aa8.07□□□□□ -1.12
TRAF4-202ENST00000262396 TRBV6-8A0A0A6YYG3 113 aa8.06□□□□□ -1.12
TRAF4-202ENST00000262396 MUC21A0A0G2JKD1 596 aa8.06□□□□□ -1.12
TRAF4-202ENST00000262396 MUC21A0A140T8X8 626 aa8.06□□□□□ -1.12
TRAF4-202ENST00000262396 KANTRA0A1W2PQU2 76 aa8.06□□□□□ -1.12
TRAF4-202ENST00000262396 UMAD1C9J7I0 102 aa8.06□□□□□ -1.12
TRAF4-202ENST00000262396 EIF5AP63241 154 aaKnown RBP8.06□□□□□ -1.12
TRAF4-202ENST00000262396 RPL19P84098 196 aaKnown RBP8.06□□□□□ -1.12
TRAF4-202ENST00000262396 SCXQ7RTU7 201 aa8.06□□□□□ -1.12
TRAF4-202ENST00000262396 KCNRGQ8N5I3 272 aa8.06□□□□□ -1.12
TRAF4-202ENST00000262396 DAZAP1Q96EP5 407 aaKnown RBP8.06□□□□□ -1.12
TRAF4-202ENST00000262396 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
TRAF4-202ENST00000262396 FLG2Q5D862 2391 aaPredicted RBP8.05□□□□□ -1.12
TRAF4-202ENST00000262396 SCO2A0A1W2PP80 73 aa8.05□□□□□ -1.12
TRAF4-202ENST00000262396 H2AFB1P0C5Y9 115 aa8.05□□□□□ -1.12
TRAF4-202ENST00000262396 OR10AG1Q8NH19 301 aa8.05□□□□□ -1.12
TRAF4-202ENST00000262396 DNAJC30Q96LL9 226 aa8.05□□□□□ -1.12
TRAF4-202ENST00000262396 CHAC1Q9BUX1 264 aa8.05□□□□□ -1.12
TRAF4-202ENST00000262396 SMLR1H3BR10 107 aa8.04□□□□□ -1.12
TRAF4-202ENST00000262396 MGPP08493 103 aa8.04□□□□□ -1.12
TRAF4-202ENST00000262396 Q6ZSA8 131 aa8.04□□□□□ -1.12
TRAF4-202ENST00000262396 AP1S3Q96PC3 154 aa8.04□□□□□ -1.12
TRAF4-202ENST00000262396 DERL1Q9BUN8 251 aa8.04□□□□□ -1.12
TRAF4-202ENST00000262396 CYTL1Q9NRR1 136 aa8.04□□□□□ -1.12
TRAF4-202ENST00000262396 SRRM2Q9UQ35 2752 aaKnown RBP8.04□□□□□ -1.12
TRAF4-202ENST00000262396 TRBV25-1A0A075B6N4 114 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms