RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 OR10J6PQ8NGY7 276 aa20.3■□□□□ 0.84
SMARCD3-201ENST00000262188 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP20.29■□□□□ 0.84
SMARCD3-201ENST00000262188 J3KRW8 73 aa20.29■□□□□ 0.84
SMARCD3-201ENST00000262188 NHLRC2Q8NBF2 726 aa20.29■□□□□ 0.84
SMARCD3-201ENST00000262188 MAP1LC3CQ9BXW4 147 aa20.29■□□□□ 0.84
SMARCD3-201ENST00000262188 NBEAL1Q6ZS30 2694 aa20.29■□□□□ 0.84
SMARCD3-201ENST00000262188 KIR3DS1Q14943 382 aa20.28■□□□□ 0.84
SMARCD3-201ENST00000262188 RBMY1BA6NDE4 496 aaKnown RBP20.27■□□□□ 0.84
SMARCD3-201ENST00000262188 RBMY1EA6NEQ0 496 aaKnown RBP20.27■□□□□ 0.84
SMARCD3-201ENST00000262188 RBMY1DP0C7P1 496 aaKnown RBP20.27■□□□□ 0.84
SMARCD3-201ENST00000262188 CT45A10P0DMU9 189 aa20.27■□□□□ 0.84
SMARCD3-201ENST00000262188 PSG8Q9UQ74 426 aa20.27■□□□□ 0.84
SMARCD3-201ENST00000262188 NPIPB6E9PJ23 425 aa20.26■□□□□ 0.83
SMARCD3-201ENST00000262188 H3BMM0 161 aa20.26■□□□□ 0.83
SMARCD3-201ENST00000262188 LEPROTL1O95214 131 aa20.26■□□□□ 0.83
SMARCD3-201ENST00000262188 ATP5L2Q7Z4Y8 100 aa20.26■□□□□ 0.83
SMARCD3-201ENST00000262188 HLA-DRB4P13762 266 aa20.26■□□□□ 0.83
SMARCD3-201ENST00000262188 FXYD7P58549 80 aa20.26■□□□□ 0.83
SMARCD3-201ENST00000262188 C9orf47Q6ZRZ4 202 aa20.26■□□□□ 0.83
SMARCD3-201ENST00000262188 TMEM75Q8N9X5 138 aa20.26■□□□□ 0.83
SMARCD3-201ENST00000262188 HSPB8Q9UJY1 196 aa20.26■□□□□ 0.83
SMARCD3-201ENST00000262188 KLF12Q9Y4X4 402 aa20.26■□□□□ 0.83
SMARCD3-201ENST00000262188 HLA-DRB4X5D2U9 266 aa20.26■□□□□ 0.83
SMARCD3-201ENST00000262188 TMEM78Q5T7P6 136 aa20.25■□□□□ 0.83
SMARCD3-201ENST00000262188 Q86TA4 180 aa20.25■□□□□ 0.83
SMARCD3-201ENST00000262188 CENPWQ5EE01 88 aa20.25■□□□□ 0.83
SMARCD3-201ENST00000262188 LINC01545Q5VT33 79 aa20.25■□□□□ 0.83
SMARCD3-201ENST00000262188 C8orf49Q96NF6 230 aa20.25■□□□□ 0.83
SMARCD3-201ENST00000262188 RBAKDNA6NC62 111 aa20.24■□□□□ 0.83
SMARCD3-201ENST00000262188 RPL35AP18077 110 aaKnown RBP20.24■□□□□ 0.83
SMARCD3-201ENST00000262188 SPANXB1Q9NS25 103 aaPredicted RBP20.24■□□□□ 0.83
SMARCD3-201ENST00000262188 STHQ8IWL8 128 aa20.23■□□□□ 0.83
SMARCD3-201ENST00000262188 FMC1Q96HJ9 113 aa20.23■□□□□ 0.83
SMARCD3-201ENST00000262188 IGF2BP2-AS1Q96M15 143 aa20.23■□□□□ 0.83
SMARCD3-201ENST00000262188 ERG28Q9UKR5 140 aa20.23■□□□□ 0.83
SMARCD3-201ENST00000262188 ZNF138P52744 262 aa20.23■□□□□ 0.83
SMARCD3-201ENST00000262188 ZNF492Q9P255 531 aa20.23■□□□□ 0.83
SMARCD3-201ENST00000262188 CMC4P56277 68 aaPredicted RBP20.22■□□□□ 0.83
SMARCD3-201ENST00000262188 IBA57Q5T440 356 aaKnown RBP20.21■□□□□ 0.83
SMARCD3-201ENST00000262188 AMTNQ6UX39 209 aa20.21■□□□□ 0.83
SMARCD3-201ENST00000262188 FAM231DQ6ZW35 169 aa20.21■□□□□ 0.83
SMARCD3-201ENST00000262188 CYSLTR1Q9Y271 337 aa20.21■□□□□ 0.83
SMARCD3-201ENST00000262188 GAGE5Q13069 117 aa20.2■□□□□ 0.82
SMARCD3-201ENST00000262188 GAGE6Q13070 117 aa20.2■□□□□ 0.82
SMARCD3-201ENST00000262188 SPINK13Q1W4C9 94 aa20.2■□□□□ 0.82
SMARCD3-201ENST00000262188 PRR9Q5T870 116 aa20.2■□□□□ 0.82
SMARCD3-201ENST00000262188 TRPT1Q86TN4 253 aaKnown RBP20.2■□□□□ 0.82
SMARCD3-201ENST00000262188 LINC00477Q96M19 166 aa20.2■□□□□ 0.82
SMARCD3-201ENST00000262188 SPANXA1Q9NS26 97 aa20.2■□□□□ 0.82
SMARCD3-201ENST00000262188 TP73-AS1Q9UF72 201 aa20.2■□□□□ 0.82
SMARCD3-201ENST00000262188 LTAP01374 205 aa20.19■□□□□ 0.82
SMARCD3-201ENST00000262188 Q6ZQT7 251 aa20.19■□□□□ 0.82
SMARCD3-201ENST00000262188 DUSP14O95147 198 aaKnown RBP20.19■□□□□ 0.82
SMARCD3-201ENST00000262188 IGLV2-8P01709 118 aa20.19■□□□□ 0.82
SMARCD3-201ENST00000262188 TRAV12-2A0A075B6T6 113 aa20.18■□□□□ 0.82
SMARCD3-201ENST00000262188 IGHV1-24A0A0C4DH33 117 aa20.18■□□□□ 0.82
SMARCD3-201ENST00000262188 TRBV7-9A0A0J9YWB2 115 aa20.18■□□□□ 0.82
SMARCD3-201ENST00000262188 FGF6P10767 208 aa20.18■□□□□ 0.82
SMARCD3-201ENST00000262188 SPINK4O60575 86 aa20.17■□□□□ 0.82
SMARCD3-201ENST00000262188 BOD1L2Q8IYS8 172 aa20.17■□□□□ 0.82
SMARCD3-201ENST00000262188 FAM19A4Q96LR4 140 aa20.17■□□□□ 0.82
SMARCD3-201ENST00000262188 IGHV4-30-4P0DP06 118 aa20.16■□□□□ 0.82
SMARCD3-201ENST00000262188 ZC2HC1AQ96GY0 325 aa20.16■□□□□ 0.82
SMARCD3-201ENST00000262188 URB1-AS1Q96HZ7 61 aa20.16■□□□□ 0.82
SMARCD3-201ENST00000262188 SMIM13P0DJ93 91 aa20.15■□□□□ 0.82
SMARCD3-201ENST00000262188 KPRPQ5T749 579 aaPredicted RBP20.15■□□□□ 0.82
SMARCD3-201ENST00000262188 ZFAND2AQ8N6M9 145 aa20.15■□□□□ 0.82
SMARCD3-201ENST00000262188 A8MTW9 85 aa20.15■□□□□ 0.82
SMARCD3-201ENST00000262188 MGST1P10620 155 aaKnown RBP20.15■□□□□ 0.82
SMARCD3-201ENST00000262188 ZNF80P51504 273 aaPredicted RBP20.15■□□□□ 0.82
SMARCD3-201ENST00000262188 RNASE7Q9H1E1 156 aaKnown RBP20.14■□□□□ 0.81
SMARCD3-201ENST00000262188 TRBV6-1A0A0K0K1D8 114 aa20.14■□□□□ 0.81
SMARCD3-201ENST00000262188 TCL1AP56279 114 aa20.14■□□□□ 0.81
SMARCD3-201ENST00000262188 MLST8Q9BVC4 326 aa20.14■□□□□ 0.81
SMARCD3-201ENST00000262188 TNFRSF18Q9Y5U5 241 aa20.14■□□□□ 0.81
SMARCD3-201ENST00000262188 LINC00322Q6ZN03 302 aaPredicted RBP20.13■□□□□ 0.81
SMARCD3-201ENST00000262188 RNASE4P34096 147 aaKnown RBP20.12■□□□□ 0.81
SMARCD3-201ENST00000262188 NDFIP1Q9BT67 221 aa20.12■□□□□ 0.81
SMARCD3-201ENST00000262188 XCL2Q9UBD3 114 aa20.12■□□□□ 0.81
SMARCD3-201ENST00000262188 CRIP1P50238 77 aa20.12■□□□□ 0.81
SMARCD3-201ENST00000262188 GIG44P09565 113 aaPredicted RBP20.11■□□□□ 0.81
SMARCD3-201ENST00000262188 ATP6V0E2Q8NHE4 81 aa20.1■□□□□ 0.81
SMARCD3-201ENST00000262188 VCX2Q9H322 139 aa20.1■□□□□ 0.81
SMARCD3-201ENST00000262188 A0A1B0GXF2 115 aa20.1■□□□□ 0.81
SMARCD3-201ENST00000262188 K7EIL1 84 aa20.1■□□□□ 0.81
SMARCD3-201ENST00000262188 GTSF1Q8WW33 167 aa20.1■□□□□ 0.81
SMARCD3-201ENST00000262188 FBLL1A6NHQ2 334 aaKnown RBP20.09■□□□□ 0.81
SMARCD3-201ENST00000262188 RBMY1A1P0DJD3 496 aaKnown RBP20.09■□□□□ 0.81
SMARCD3-201ENST00000262188 RBMY1CP0DJD4 496 aa20.09■□□□□ 0.81
SMARCD3-201ENST00000262188 RBMY1FQ15415 496 aaKnown RBP20.09■□□□□ 0.81
SMARCD3-201ENST00000262188 TRAV12-3A0A0B4J271 114 aa20.08■□□□□ 0.81
SMARCD3-201ENST00000262188 KLLNB2CW77 178 aa20.08■□□□□ 0.81
SMARCD3-201ENST00000262188 LEPP41159 167 aa20.08■□□□□ 0.81
SMARCD3-201ENST00000262188 HERV-K104P63124 156 aa20.08■□□□□ 0.81
SMARCD3-201ENST00000262188 ODF3Q96PU9 254 aa20.08■□□□□ 0.81
SMARCD3-201ENST00000262188 SS18L2Q9UHA2 77 aa20.08■□□□□ 0.81
SMARCD3-201ENST00000262188 CA1P00915 261 aaPredicted RBP20.08■□□□□ 0.8
SMARCD3-201ENST00000262188 LENEPQ9Y5L5 61 aa20.08■□□□□ 0.8
SMARCD3-201ENST00000262188 NUP35Q8NFH5 326 aa20.06■□□□□ 0.8
SMARCD3-201ENST00000262188 HIGD1BQ9P298 99 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms