RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ANKRD29Q8N6D5 301 aa8.14□□□□□ -1.11
CHRNA1-201ENST00000261007 POM121L12Q8N7R1 296 aa8.14□□□□□ -1.11
CHRNA1-201ENST00000261007 PRO1854Q9UHT4 67 aa8.14□□□□□ -1.11
CHRNA1-201ENST00000261007 IGHV3OR16-8A0A075B7F1 116 aa8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 RHODO00212 210 aa8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 IGLV1-40P01703 118 aa8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 CRYGDP07320 174 aa8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 SCGB1C2P0DMR2 95 aa8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 BEX4Q9NWD9 120 aaPredicted RBP8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 SMG1Q96Q15 3661 aaKnown RBP8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 PF4V1P10720 104 aa8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 Q6Q795 121 aa8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 LRRC75A-AS1Q8N1F1 130 aa8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 KLHL30-AS1Q8NEE0 82 aa8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 TMEM141Q96I45 108 aa8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 C16orf92Q96LL3 132 aa8.13□□□□□ -1.11
CHRNA1-201ENST00000261007 ABCA2Q9BZC7 2435 aa8.12□□□□□ -1.11
CHRNA1-201ENST00000261007 IGLV4-69A0A075B6H9 119 aa8.12□□□□□ -1.11
CHRNA1-201ENST00000261007 A0A096LNT2 108 aa8.12□□□□□ -1.11
CHRNA1-201ENST00000261007 C11orf86A6NJI1 115 aa8.12□□□□□ -1.11
CHRNA1-201ENST00000261007 PMVKQ15126 192 aa8.12□□□□□ -1.11
CHRNA1-201ENST00000261007 ZNF843Q8N446 348 aa8.12□□□□□ -1.11
CHRNA1-201ENST00000261007 LINC00477Q96M19 166 aa8.12□□□□□ -1.11
CHRNA1-201ENST00000261007 LINC00527Q9UJ94 153 aa8.12□□□□□ -1.11
CHRNA1-201ENST00000261007 MED13LQ71F56 2210 aa8.12□□□□□ -1.11
CHRNA1-201ENST00000261007 TRAV21A0A0B4J279 112 aa8.11□□□□□ -1.11
CHRNA1-201ENST00000261007 OVOL1O14753 267 aa8.11□□□□□ -1.11
CHRNA1-201ENST00000261007 SLC25A20O43772 301 aa8.11□□□□□ -1.11
CHRNA1-201ENST00000261007 P0DMU3 169 aa8.11□□□□□ -1.11
CHRNA1-201ENST00000261007 FAM231AP0DMU4 169 aa8.11□□□□□ -1.11
CHRNA1-201ENST00000261007 FAM231CP0DMU5 169 aa8.11□□□□□ -1.11
CHRNA1-201ENST00000261007 CFHR3Q02985 330 aa8.11□□□□□ -1.11
CHRNA1-201ENST00000261007 SFTA2Q6UW10 78 aa8.11□□□□□ -1.11
CHRNA1-201ENST00000261007 RPL39LQ96EH5 51 aaKnown RBP8.11□□□□□ -1.11
CHRNA1-201ENST00000261007 IGHV3-66A0A0C4DH42 116 aa8.11□□□□□ -1.11
CHRNA1-201ENST00000261007 IGIPA6NJ69 53 aa8.11□□□□□ -1.11
CHRNA1-201ENST00000261007 K7EMT4 169 aa8.11□□□□□ -1.11
CHRNA1-201ENST00000261007 GPHB5Q86YW7 130 aa8.11□□□□□ -1.11
CHRNA1-201ENST00000261007 IGHV4OR15-8A0A075B7B6 117 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 A0A087WW49 117 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 TRBV7-9A0A0J9YWB2 115 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 AVPP01185 164 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 NHLRC4P0CG21 123 aaPredicted RBP8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 BLCAPP62952 87 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 GAGE2BQ13066 116 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 GAGE2EQ4V326 116 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 C14orf178Q8N769 122 aaPredicted RBP8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 TIMM17AQ99595 171 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 GAGE2DQ9UEU5 116 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 PHLDA3Q9Y5J5 127 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 DOPEY1Q5JWR5 2465 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 A0A0B4J2C4 111 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 SNCGO76070 127 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 DUSP14O95147 198 aaKnown RBP8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 TSHBP01222 138 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 S100A4P26447 101 aaKnown RBP8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 PRR9Q5T870 116 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 KIR2DL4Q99706 377 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 DAZ1Q9NQZ3 744 aaKnown RBP8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 SS18L2Q9UHA2 77 aa8.1□□□□□ -1.11
CHRNA1-201ENST00000261007 LRBAP50851 2863 aa8.09□□□□□ -1.11
CHRNA1-201ENST00000261007 IGHV3OR16-13A0A075B7E8 117 aa8.09□□□□□ -1.11
CHRNA1-201ENST00000261007 IGHV3-49A0A0A0MS15 119 aa8.09□□□□□ -1.11
CHRNA1-201ENST00000261007 IGHV3-74A0A0B4J1X5 117 aa8.09□□□□□ -1.11
CHRNA1-201ENST00000261007 TGFAP01135 160 aa8.09□□□□□ -1.11
CHRNA1-201ENST00000261007 PRB1P04280 392 aa8.09□□□□□ -1.11
CHRNA1-201ENST00000261007 NDUFV3P56181 108 aaKnown RBP8.09□□□□□ -1.11
CHRNA1-201ENST00000261007 DEFB112Q30KQ8 113 aa8.09□□□□□ -1.11
CHRNA1-201ENST00000261007 Q6ZQT7 251 aa8.09□□□□□ -1.11
CHRNA1-201ENST00000261007 Q6ZS46 218 aa8.09□□□□□ -1.11
CHRNA1-201ENST00000261007 OR10J6PQ8NGY7 276 aa8.09□□□□□ -1.11
CHRNA1-201ENST00000261007 AMELXQ99217 191 aa8.09□□□□□ -1.11
CHRNA1-201ENST00000261007 ZZEF1O43149 2961 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 NXPH4O95158 308 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 IGHV3-33P01772 117 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 MGPP08493 103 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 RPL13AP40429 203 aaKnown RBP8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 UNQ9165/PRO28630Q6UXU0 137 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 ZFAND2AQ8N6M9 145 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 BBC3Q96PG8 261 aaPredicted RBP8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 GAGE12JA6NER3 117 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 C9JAW5 83 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 J3QQQ9 107 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 SOCS3O14543 225 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 VCYO14598 125 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 GAGE7O76087 117 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 FSHBP01225 129 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 TRBV12-3P01733 135 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 GAGE12FP0CL80 117 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 GAGE12GP0CL81 117 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 GAGE12IP0CL82 117 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 PSMB8P28062 276 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 POLR2KP53803 58 aaKnown RBP8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 GAGE4Q13068 117 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 DEFB113Q30KQ7 82 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 ZNF876PQ49A33 203 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 TMEM263Q8WUH6 116 aaKnown RBP8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 NRGNQ92686 78 aa8.08□□□□□ -1.12
CHRNA1-201ENST00000261007 TP53TG1Q9Y2A0 90 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms