RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 SPINK13Q1W4C9 94 aa11.51□□□□□ -0.57
KCTD3-201ENST00000259154 ITLN2Q8WWU7 325 aaPredicted RBP11.51□□□□□ -0.57
KCTD3-201ENST00000259154 CUBNO60494 3623 aa11.5□□□□□ -0.57
KCTD3-201ENST00000259154 VCYO14598 125 aa11.5□□□□□ -0.57
KCTD3-201ENST00000259154 CGB3P0DN86 165 aa11.5□□□□□ -0.57
KCTD3-201ENST00000259154 CGB7P0DN87 165 aa11.5□□□□□ -0.57
KCTD3-201ENST00000259154 GAGE2AQ6NT46 116 aa11.5□□□□□ -0.57
KCTD3-201ENST00000259154 H3BMM0 161 aa11.5□□□□□ -0.57
KCTD3-201ENST00000259154 UBE2WQ96B02 151 aa11.5□□□□□ -0.57
KCTD3-201ENST00000259154 IGF1P05019 195 aa11.5□□□□□ -0.57
KCTD3-201ENST00000259154 SNRPD3P62318 126 aaKnown RBP11.5□□□□□ -0.57
KCTD3-201ENST00000259154 HIST1H4AP62805 103 aaKnown RBP11.5□□□□□ -0.57
KCTD3-201ENST00000259154 C9orf153Q5TBE3 101 aa11.5□□□□□ -0.57
KCTD3-201ENST00000259154 DYNLRB2Q8TF09 96 aa11.5□□□□□ -0.57
KCTD3-201ENST00000259154 TEX22C9J3V5 150 aa11.49□□□□□ -0.57
KCTD3-201ENST00000259154 SAA4P35542 130 aa11.49□□□□□ -0.57
KCTD3-201ENST00000259154 C16orf54Q6UWD8 224 aa11.49□□□□□ -0.57
KCTD3-201ENST00000259154 TIMM21Q9BVV7 248 aa11.49□□□□□ -0.57
KCTD3-201ENST00000259154 RHPN1-AS1Q9BWJ2 59 aa11.49□□□□□ -0.57
KCTD3-201ENST00000259154 HERV-K104P63124 156 aa11.49□□□□□ -0.57
KCTD3-201ENST00000259154 PMVKQ15126 192 aa11.49□□□□□ -0.57
KCTD3-201ENST00000259154 THBDP07204 575 aa11.48□□□□□ -0.57
KCTD3-201ENST00000259154 LGALS1P09382 135 aaKnown RBP11.48□□□□□ -0.57
KCTD3-201ENST00000259154 Q6ZUT4 128 aa11.48□□□□□ -0.57
KCTD3-201ENST00000259154 TEN1Q86WV5 123 aa11.48□□□□□ -0.57
KCTD3-201ENST00000259154 C11orf86A6NJI1 115 aa11.48□□□□□ -0.57
KCTD3-201ENST00000259154 PRRC2AP48634 2157 aaKnown RBP11.47□□□□□ -0.57
KCTD3-201ENST00000259154 TRAV41A0A0B4J266 112 aa11.47□□□□□ -0.57
KCTD3-201ENST00000259154 A0A0J9YXV3 536 aa11.47□□□□□ -0.57
KCTD3-201ENST00000259154 TCL1BO95988 128 aa11.47□□□□□ -0.57
KCTD3-201ENST00000259154 CARD19Q96LW7 228 aa11.47□□□□□ -0.57
KCTD3-201ENST00000259154 LINC01587Q99440 93 aa11.47□□□□□ -0.57
KCTD3-201ENST00000259154 HRNRQ86YZ3 2850 aaPredicted RBP11.47□□□□□ -0.57
KCTD3-201ENST00000259154 E9PLD3 99 aa11.47□□□□□ -0.57
KCTD3-201ENST00000259154 MSRB2Q9Y3D2 182 aa11.47□□□□□ -0.57
KCTD3-201ENST00000259154 CTSGP08311 255 aa11.46□□□□□ -0.57
KCTD3-201ENST00000259154 ZNF493Q6ZR52 646 aa11.46□□□□□ -0.57
KCTD3-201ENST00000259154 GATD1Q8NB37 220 aa11.46□□□□□ -0.57
KCTD3-201ENST00000259154 UBE2L6O14933 153 aa11.46□□□□□ -0.57
KCTD3-201ENST00000259154 PRB1P04280 392 aa11.46□□□□□ -0.57
KCTD3-201ENST00000259154 CFC1BP0CG36 223 aa11.46□□□□□ -0.57
KCTD3-201ENST00000259154 CFC1P0CG37 223 aa11.46□□□□□ -0.57
KCTD3-201ENST00000259154 NBL1P41271 181 aa11.46□□□□□ -0.57
KCTD3-201ENST00000259154 UFSP1Q6NVU6 142 aa11.46□□□□□ -0.58
KCTD3-201ENST00000259154 IGLV2-11P01706 119 aa11.45□□□□□ -0.58
KCTD3-201ENST00000259154 XGP55808 180 aa11.45□□□□□ -0.58
KCTD3-201ENST00000259154 MUSTN1Q8IVN3 82 aa11.45□□□□□ -0.58
KCTD3-201ENST00000259154 CR1LQ2VPA4 569 aa11.45□□□□□ -0.58
KCTD3-201ENST00000259154 CENPEQ02224 2701 aa11.45□□□□□ -0.58
KCTD3-201ENST00000259154 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.45□□□□□ -0.58
KCTD3-201ENST00000259154 GNLYP22749 145 aa11.45□□□□□ -0.58
KCTD3-201ENST00000259154 HOXD3P31249 432 aaPredicted RBP11.45□□□□□ -0.58
KCTD3-201ENST00000259154 C7orf69Q9H7B7 122 aa11.45□□□□□ -0.58
KCTD3-201ENST00000259154 CLEC2BQ92478 149 aa11.44□□□□□ -0.58
KCTD3-201ENST00000259154 NDUFA12Q9UI09 145 aa11.44□□□□□ -0.58
KCTD3-201ENST00000259154 H3BUX3 64 aa11.44□□□□□ -0.58
KCTD3-201ENST00000259154 TEX49A0A1B0GTD5 131 aa11.43□□□□□ -0.58
KCTD3-201ENST00000259154 C9orf139Q6ZV77 190 aa11.43□□□□□ -0.58
KCTD3-201ENST00000259154 A0A1W2PRX2 142 aa11.43□□□□□ -0.58
KCTD3-201ENST00000259154 MYCNOSP40205 109 aa11.43□□□□□ -0.58
KCTD3-201ENST00000259154 TAL2Q16559 108 aa11.43□□□□□ -0.58
KCTD3-201ENST00000259154 LINC01559Q495D7 138 aa11.43□□□□□ -0.58
KCTD3-201ENST00000259154 LINC00311Q8N616 119 aa11.43□□□□□ -0.58
KCTD3-201ENST00000259154 BAALCQ8WXS3 180 aa11.43□□□□□ -0.58
KCTD3-201ENST00000259154 CEMP1Q6PRD7 247 aaPredicted RBP11.43□□□□□ -0.58
KCTD3-201ENST00000259154 HIGD1BQ9P298 99 aa11.43□□□□□ -0.58
KCTD3-201ENST00000259154 PRIMA1Q86XR5 153 aa11.42□□□□□ -0.58
KCTD3-201ENST00000259154 UBE2E2Q96LR5 201 aa11.42□□□□□ -0.58
KCTD3-201ENST00000259154 CCL19Q99731 98 aa11.42□□□□□ -0.58
KCTD3-201ENST00000259154 A0A096LNJ9 63 aa11.42□□□□□ -0.58
KCTD3-201ENST00000259154 OVOL1O14753 267 aa11.42□□□□□ -0.58
KCTD3-201ENST00000259154 CRYGCP07315 174 aa11.42□□□□□ -0.58
KCTD3-201ENST00000259154 LINC00158P58513 81 aa11.42□□□□□ -0.58
KCTD3-201ENST00000259154 BPESC1Q9GZL8 116 aa11.42□□□□□ -0.58
KCTD3-201ENST00000259154 GATA3P23771 443 aa11.41□□□□□ -0.58
KCTD3-201ENST00000259154 FANCD2OSQ96PS1 177 aa11.41□□□□□ -0.58
KCTD3-201ENST00000259154 PIMREGQ9BSJ6 248 aa11.41□□□□□ -0.58
KCTD3-201ENST00000259154 LINC01548A6NM66 108 aa11.41□□□□□ -0.58
KCTD3-201ENST00000259154 HOXB4P17483 251 aaPredicted RBP11.41□□□□□ -0.58
KCTD3-201ENST00000259154 MAPK1IP1LQ8NDC0 245 aa11.41□□□□□ -0.58
KCTD3-201ENST00000259154 SHISA9B4DS77 424 aa11.4□□□□□ -0.58
KCTD3-201ENST00000259154 TMEM101Q96IK0 257 aa11.4□□□□□ -0.58
KCTD3-201ENST00000259154 FAM236AA0A1B0GUQ0 79 aa11.39□□□□□ -0.59
KCTD3-201ENST00000259154 FAM236BA0A1B0GV22 79 aa11.39□□□□□ -0.59
KCTD3-201ENST00000259154 BUB3O43684 328 aa11.39□□□□□ -0.59
KCTD3-201ENST00000259154 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.39□□□□□ -0.59
KCTD3-201ENST00000259154 TINCRA0A1B0GVN0 87 aa11.39□□□□□ -0.59
KCTD3-201ENST00000259154 IGKV2-29A2NJV5 120 aaPredicted RBP11.39□□□□□ -0.59
KCTD3-201ENST00000259154 Q8NA96 180 aa11.39□□□□□ -0.59
KCTD3-201ENST00000259154 LRRK2Q5S007 2527 aa11.39□□□□□ -0.59
KCTD3-201ENST00000259154 RNF5Q99942 180 aa11.39□□□□□ -0.59
KCTD3-201ENST00000259154 CHCHD5Q9BSY4 110 aa11.39□□□□□ -0.59
KCTD3-201ENST00000259154 TM2D2Q9BX73 214 aa11.39□□□□□ -0.59
KCTD3-201ENST00000259154 PAX4O43316 350 aa11.38□□□□□ -0.59
KCTD3-201ENST00000259154 LINC01620Q4KN68 170 aa11.38□□□□□ -0.59
KCTD3-201ENST00000259154 CSMD2Q7Z408 3487 aa11.38□□□□□ -0.59
KCTD3-201ENST00000259154 IGLV1-47P01700 117 aa11.38□□□□□ -0.59
KCTD3-201ENST00000259154 NDUFA11Q86Y39 141 aa11.38□□□□□ -0.59
KCTD3-201ENST00000259154 RNF185Q96GF1 192 aa11.38□□□□□ -0.59
KCTD3-201ENST00000259154 PFN2P35080 140 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms