RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 IGHV3-30P01768 117 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 IGHV3-33P01772 117 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 SMIM6P0DI80 62 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 IGHV3-30-3P0DP02 117 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 IGHV3-30-5P0DP03 117 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 MGST1P10620 155 aaKnown RBP6.83□□□□□ -1.32
VPS50-201ENST00000251739 GCHFRP30047 84 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 RNF151Q2KHN1 245 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 PIK3CD-AS1Q5SR53 167 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 UFSP1Q6NVU6 142 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 RAB24Q969Q5 203 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 C12orf57Q99622 126 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 PSMG3Q9BT73 122 aaPredicted RBP6.83□□□□□ -1.32
VPS50-201ENST00000251739 BIN3Q9NQY0 253 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 PSG8Q9UQ74 426 aa6.83□□□□□ -1.32
VPS50-201ENST00000251739 IGHV3-73A0A0B4J1V6 119 aa6.82□□□□□ -1.32
VPS50-201ENST00000251739 KRTAP9-7A8MTY7 169 aa6.82□□□□□ -1.32
VPS50-201ENST00000251739 ZFP2Q6ZN57 461 aa6.82□□□□□ -1.32
VPS50-201ENST00000251739 TCTE3Q8IZS6 198 aa6.82□□□□□ -1.32
VPS50-201ENST00000251739 CYB561D1Q8N8Q1 229 aa6.82□□□□□ -1.32
VPS50-201ENST00000251739 CLRN3Q8NCR9 226 aa6.82□□□□□ -1.32
VPS50-201ENST00000251739 ATP6V0E2Q8NHE4 81 aa6.82□□□□□ -1.32
VPS50-201ENST00000251739 LINC00479Q96M42 142 aa6.82□□□□□ -1.32
VPS50-201ENST00000251739 PARLQ9H300 379 aa6.82□□□□□ -1.32
VPS50-201ENST00000251739 PKHD1L1Q86WI1 4243 aa6.82□□□□□ -1.32
VPS50-201ENST00000251739 FAT3Q8TDW7 4589 aa6.81□□□□□ -1.32
VPS50-201ENST00000251739 HMCN2Q8NDA2 5059 aa6.81□□□□□ -1.32
VPS50-201ENST00000251739 IGKV3D-20A0A0C4DH25 116 aa6.81□□□□□ -1.32
VPS50-201ENST00000251739 KRTAP4-8A0A0G2JLE6 195 aa6.81□□□□□ -1.32
VPS50-201ENST00000251739 ATP6V0CP27449 155 aa6.81□□□□□ -1.32
VPS50-201ENST00000251739 TOR2AQ5JU69 321 aa6.81□□□□□ -1.32
VPS50-201ENST00000251739 HSD17B11Q8NBQ5 300 aa6.81□□□□□ -1.32
VPS50-201ENST00000251739 AQP10Q96PS8 301 aa6.81□□□□□ -1.32
VPS50-201ENST00000251739 TM2D2Q9BX73 214 aa6.81□□□□□ -1.32
VPS50-201ENST00000251739 Q9UF83 564 aa6.81□□□□□ -1.32
VPS50-201ENST00000251739 EPDR1Q9UM22 224 aa6.81□□□□□ -1.32
VPS50-201ENST00000251739 K7EQM0 130 aa6.8□□□□□ -1.32
VPS50-201ENST00000251739 NKX2-5P52952 324 aaPredicted RBP6.8□□□□□ -1.32
VPS50-201ENST00000251739 SERF2P84101 59 aa6.8□□□□□ -1.32
VPS50-201ENST00000251739 TMEM167BQ9NRX6 74 aa6.8□□□□□ -1.32
VPS50-201ENST00000251739 A0A1W2PRE2 83 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 A8MWV9 139 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 CXorf1O96002 111 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 MBP02144 154 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 SAPCD1Q5SSQ6 148 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 DNLZQ5SXM8 178 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 DAZ4Q86SG3 579 aaKnown RBP6.79□□□□□ -1.32
VPS50-201ENST00000251739 PRNTQ86SH4 94 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 SH3BGRL3Q9H299 93 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 JPT2Q9H910 190 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 DAZ3Q9NR90 486 aaKnown RBP6.79□□□□□ -1.32
VPS50-201ENST00000251739 MED9Q9NWA0 146 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 IL36BQ9NZH7 164 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 TNFSF18Q9UNG2 199 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 ALG5Q9Y673 324 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 ARL2-SNX15V9GYD0 113 aa6.79□□□□□ -1.32
VPS50-201ENST00000251739 TRAV8-3A0A0A6YYJ7 113 aa6.78□□□□□ -1.32
VPS50-201ENST00000251739 GAGE12JA6NER3 117 aa6.78□□□□□ -1.32
VPS50-201ENST00000251739 KRTAP10-4P60372 401 aaPredicted RBP6.78□□□□□ -1.32
VPS50-201ENST00000251739 GAGE1Q13065 139 aa6.78□□□□□ -1.32
VPS50-201ENST00000251739 GAGE4Q13068 117 aa6.78□□□□□ -1.32
VPS50-201ENST00000251739 GAGE5Q13069 117 aa6.78□□□□□ -1.32
VPS50-201ENST00000251739 ZNF726P1Q15940 193 aa6.78□□□□□ -1.32
VPS50-201ENST00000251739 GAGE13Q4V321 117 aa6.78□□□□□ -1.32
VPS50-201ENST00000251739 CLLU1Q5K131 121 aa6.78□□□□□ -1.32
VPS50-201ENST00000251739 COX8CQ7Z4L0 72 aa6.78□□□□□ -1.32
VPS50-201ENST00000251739 Q86TA4 180 aa6.78□□□□□ -1.32
VPS50-201ENST00000251739 C14orf178Q8N769 122 aaPredicted RBP6.78□□□□□ -1.32
VPS50-201ENST00000251739 SAMD10Q9BYL1 202 aa6.78□□□□□ -1.32
VPS50-201ENST00000251739 A0A087WWC5 75 aa6.77□□□□□ -1.33
VPS50-201ENST00000251739 KRTAP29-1A8MX34 341 aaPredicted RBP6.77□□□□□ -1.33
VPS50-201ENST00000251739 LECT2O14960 151 aa6.77□□□□□ -1.33
VPS50-201ENST00000251739 ASIPP42127 132 aa6.77□□□□□ -1.33
VPS50-201ENST00000251739 Q5BKY6 102 aa6.77□□□□□ -1.33
VPS50-201ENST00000251739 ACTR3CQ9C0K3 210 aaPredicted RBP6.77□□□□□ -1.33
VPS50-201ENST00000251739 TRAV34A0A0B4J273 112 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 RNF222A6NCQ9 220 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 FABP5P3A8MUU1 101 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 H3BVH4 76 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 RHODO00212 210 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 PEX7O00628 323 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 CRIP1P50238 77 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 AKR1D1P51857 326 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 ATRAIDQ6UW56 229 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 SCXQ7RTU7 201 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 NIT1Q86X76 327 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 OR2T35Q8NGX2 323 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 DNAJC30Q96LL9 226 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 CHTOPQ9Y3Y2 248 aaKnown RBP6.76□□□□□ -1.33
VPS50-201ENST00000251739 COX11Q9Y6N1 276 aa6.76□□□□□ -1.33
VPS50-201ENST00000251739 CTXND1A0A1B0GTU2 59 aa6.75□□□□□ -1.33
VPS50-201ENST00000251739 B4DEV8 164 aa6.75□□□□□ -1.33
VPS50-201ENST00000251739 S100A4P26447 101 aaKnown RBP6.75□□□□□ -1.33
VPS50-201ENST00000251739 PCP4P48539 62 aa6.75□□□□□ -1.33
VPS50-201ENST00000251739 FGF8P55075 233 aaPredicted RBP6.75□□□□□ -1.33
VPS50-201ENST00000251739 LGALSLQ3ZCW2 172 aaPredicted RBP6.75□□□□□ -1.33
VPS50-201ENST00000251739 CT83Q5H943 113 aa6.75□□□□□ -1.33
VPS50-201ENST00000251739 RPL7L1Q6DKI1 246 aaKnown RBP6.75□□□□□ -1.33
VPS50-201ENST00000251739 BAALCQ8WXS3 180 aa6.75□□□□□ -1.33
VPS50-201ENST00000251739 ZC2HC1AQ96GY0 325 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms