RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 C20orf78Q9BR46 151 aa9.5□□□□□ -0.89
RAB3IP-201ENST00000247833 ITPR1Q14643 2758 aa9.49□□□□□ -0.89
RAB3IP-201ENST00000247833 PPP1R17O96001 155 aa9.49□□□□□ -0.89
RAB3IP-201ENST00000247833 C12orf74Q32Q52 190 aa9.49□□□□□ -0.89
RAB3IP-201ENST00000247833 SUMO4Q6EEV6 95 aa9.49□□□□□ -0.89
RAB3IP-201ENST00000247833 JMJD1CQ15652 2540 aa9.49□□□□□ -0.89
RAB3IP-201ENST00000247833 UTP20O75691 2785 aaKnown RBP9.49□□□□□ -0.89
RAB3IP-201ENST00000247833 HIST2H2BDQ6DRA6 164 aa9.49□□□□□ -0.89
RAB3IP-201ENST00000247833 SYT8Q8NBV8 401 aa9.49□□□□□ -0.89
RAB3IP-201ENST00000247833 BEX4Q9NWD9 120 aaPredicted RBP9.49□□□□□ -0.89
RAB3IP-201ENST00000247833 MDFICQ9P1T7 246 aa9.49□□□□□ -0.89
RAB3IP-201ENST00000247833 HIGD1BQ9P298 99 aa9.49□□□□□ -0.89
RAB3IP-201ENST00000247833 SCGB1C2P0DMR2 95 aa9.48□□□□□ -0.89
RAB3IP-201ENST00000247833 TOMM6Q96B49 74 aa9.48□□□□□ -0.89
RAB3IP-201ENST00000247833 ZMAT4Q9H898 229 aa9.48□□□□□ -0.89
RAB3IP-201ENST00000247833 PGPEP1Q9NXJ5 209 aa9.48□□□□□ -0.89
RAB3IP-201ENST00000247833 TEX48A0A1B0GUV7 120 aa9.48□□□□□ -0.89
RAB3IP-201ENST00000247833 KNCNA6PVL3 124 aa9.48□□□□□ -0.89
RAB3IP-201ENST00000247833 DEFB136Q30KP8 78 aa9.48□□□□□ -0.89
RAB3IP-201ENST00000247833 ETDBQ3ZM63 59 aa9.48□□□□□ -0.89
RAB3IP-201ENST00000247833 ZNF876PQ49A33 203 aa9.47□□□□□ -0.89
RAB3IP-201ENST00000247833 NDUFS8O00217 210 aa9.47□□□□□ -0.89
RAB3IP-201ENST00000247833 VCYO14598 125 aa9.47□□□□□ -0.89
RAB3IP-201ENST00000247833 HOXA3O43365 443 aaPredicted RBP9.47□□□□□ -0.89
RAB3IP-201ENST00000247833 ZNF418Q8TF45 676 aaPredicted RBP9.47□□□□□ -0.89
RAB3IP-201ENST00000247833 DUX3Q96PT4 197 aa9.47□□□□□ -0.89
RAB3IP-201ENST00000247833 OPRPNQ99935 248 aaPredicted RBP9.47□□□□□ -0.89
RAB3IP-201ENST00000247833 PRRC2AP48634 2157 aaKnown RBP9.47□□□□□ -0.89
RAB3IP-201ENST00000247833 A0A1B0GWB2 263 aa9.47□□□□□ -0.89
RAB3IP-201ENST00000247833 IGLL5B9A064 214 aa9.47□□□□□ -0.89
RAB3IP-201ENST00000247833 SH2D6Q7Z4S9 175 aa9.46□□□□□ -0.89
RAB3IP-201ENST00000247833 C11orf44Q8N8P7 122 aa9.46□□□□□ -0.89
RAB3IP-201ENST00000247833 IGHV4-4A0A075B6R2 117 aa9.46□□□□□ -0.89
RAB3IP-201ENST00000247833 IGHV3OR16-12A0A075B7B8 117 aa9.46□□□□□ -0.89
RAB3IP-201ENST00000247833 RNF223E7ERA6 249 aa9.46□□□□□ -0.89
RAB3IP-201ENST00000247833 WFDC2Q14508 124 aa9.46□□□□□ -0.89
RAB3IP-201ENST00000247833 UFSP1Q6NVU6 142 aa9.46□□□□□ -0.89
RAB3IP-201ENST00000247833 PRORYQ9H606 182 aa9.46□□□□□ -0.89
RAB3IP-201ENST00000247833 C11orf86A6NJI1 115 aa9.46□□□□□ -0.9
RAB3IP-201ENST00000247833 SOCS3O14543 225 aa9.46□□□□□ -0.9
RAB3IP-201ENST00000247833 LGALS3P17931 250 aaKnown RBP9.46□□□□□ -0.9
RAB3IP-201ENST00000247833 Q8N1Y9 231 aa9.46□□□□□ -0.9
RAB3IP-201ENST00000247833 MUC4Q99102 2169 aa9.46□□□□□ -0.9
RAB3IP-201ENST00000247833 TMEM238LA0A1B0GVL6 79 aa9.45□□□□□ -0.9
RAB3IP-201ENST00000247833 LINC01549A6NIU2 74 aa9.45□□□□□ -0.9
RAB3IP-201ENST00000247833 A6NJY4 79 aa9.45□□□□□ -0.9
RAB3IP-201ENST00000247833 H3BUA1 57 aa9.45□□□□□ -0.9
RAB3IP-201ENST00000247833 J3QR89 54 aa9.45□□□□□ -0.9
RAB3IP-201ENST00000247833 PRB1P04280 392 aa9.45□□□□□ -0.9
RAB3IP-201ENST00000247833 PSMB2P49721 201 aa9.45□□□□□ -0.9
RAB3IP-201ENST00000247833 ZFP2Q6ZN57 461 aa9.45□□□□□ -0.9
RAB3IP-201ENST00000247833 NEXN-AS1Q8NBZ9 246 aa9.45□□□□□ -0.9
RAB3IP-201ENST00000247833 ACANP16112 2415 aa9.45□□□□□ -0.9
RAB3IP-201ENST00000247833 IGSF10Q6WRI0 2623 aa9.45□□□□□ -0.9
RAB3IP-201ENST00000247833 Q1RN00 199 aa9.45□□□□□ -0.9
RAB3IP-201ENST00000247833 PLEKHB2Q96CS7 222 aa9.45□□□□□ -0.9
RAB3IP-201ENST00000247833 LGALS1P09382 135 aaKnown RBP9.44□□□□□ -0.9
RAB3IP-201ENST00000247833 TRAV12-1A0A0B4J245 112 aa9.44□□□□□ -0.9
RAB3IP-201ENST00000247833 GAGE13Q4V321 117 aa9.44□□□□□ -0.9
RAB3IP-201ENST00000247833 ATP6V0BQ99437 205 aa9.44□□□□□ -0.9
RAB3IP-201ENST00000247833 PRM2P04554 102 aa9.44□□□□□ -0.9
RAB3IP-201ENST00000247833 DEFB131AP59861 70 aa9.44□□□□□ -0.9
RAB3IP-201ENST00000247833 PMVKQ15126 192 aa9.44□□□□□ -0.9
RAB3IP-201ENST00000247833 RNASE13Q5GAN3 156 aaKnown RBP9.44□□□□□ -0.9
RAB3IP-201ENST00000247833 TM2D2Q9BX73 214 aa9.44□□□□□ -0.9
RAB3IP-201ENST00000247833 GTSF1LQ9H1H1 148 aa9.44□□□□□ -0.9
RAB3IP-201ENST00000247833 IGHV1OR15-1A0A075B7D0 117 aa9.43□□□□□ -0.9
RAB3IP-201ENST00000247833 IGHV4OR15-8A0A075B7B6 117 aa9.43□□□□□ -0.9
RAB3IP-201ENST00000247833 A0A087WW49 117 aa9.43□□□□□ -0.9
RAB3IP-201ENST00000247833 C19orf54Q5BKX5 351 aa9.43□□□□□ -0.9
RAB3IP-201ENST00000247833 PRSS2P07478 247 aa9.43□□□□□ -0.9
RAB3IP-201ENST00000247833 DYNLRB2Q8TF09 96 aa9.43□□□□□ -0.9
RAB3IP-201ENST00000247833 CELSR2Q9HCU4 2923 aa9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 HOXD3P31249 432 aaPredicted RBP9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 TCTEX1D4Q5JR98 221 aa9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 LINC01356Q8N9X3 169 aa9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 TRAV2A0A0B4J234 112 aa9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 LINC01546A6NGU7 62 aa9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 COX6B1P14854 86 aa9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 DCANP1Q8TF63 244 aa9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 E9PLD3 99 aa9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 IGLV1-40P01703 118 aa9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 SMAGPQ0VAQ4 97 aa9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 RRN3P1Q2M238 152 aa9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 FOXI2Q6ZQN5 318 aa9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 VCX2Q9H322 139 aa9.42□□□□□ -0.9
RAB3IP-201ENST00000247833 ADARB2-AS1A8MUL3 147 aa9.41□□□□□ -0.9
RAB3IP-201ENST00000247833 CRIP2P52943 208 aaPredicted RBP9.41□□□□□ -0.9
RAB3IP-201ENST00000247833 SLURP1P55000 103 aa9.41□□□□□ -0.9
RAB3IP-201ENST00000247833 A0A0J9YX75 114 aa9.41□□□□□ -0.9
RAB3IP-201ENST00000247833 A0A1W2PRX2 142 aa9.41□□□□□ -0.9
RAB3IP-201ENST00000247833 P0DMU3 169 aa9.41□□□□□ -0.9
RAB3IP-201ENST00000247833 FAM231AP0DMU4 169 aa9.41□□□□□ -0.9
RAB3IP-201ENST00000247833 FAM231CP0DMU5 169 aa9.41□□□□□ -0.9
RAB3IP-201ENST00000247833 TAL2Q16559 108 aa9.41□□□□□ -0.9
RAB3IP-201ENST00000247833 KLLNB2CW77 178 aa9.4□□□□□ -0.9
RAB3IP-201ENST00000247833 G3V4G9 280 aa9.4□□□□□ -0.9
RAB3IP-201ENST00000247833 PAPPA-AS1Q5QFB9 102 aa9.4□□□□□ -0.9
RAB3IP-201ENST00000247833 SAMD13Q5VXD3 122 aa9.4□□□□□ -0.9
RAB3IP-201ENST00000247833 SPXQ9BT56 116 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms