RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 C9orf66Q5T8R8 295 aa8.51□□□□□ -1.05
COPA-201ENST00000241704 C1orf159Q96HA4 380 aa8.51□□□□□ -1.05
COPA-201ENST00000241704 SPANXDQ9BXN6 97 aa8.51□□□□□ -1.05
COPA-201ENST00000241704 GP9P14770 177 aa8.51□□□□□ -1.05
COPA-201ENST00000241704 HLA-DMBP28068 263 aa8.51□□□□□ -1.05
COPA-201ENST00000241704 C14orf178Q8N769 122 aaPredicted RBP8.51□□□□□ -1.05
COPA-201ENST00000241704 FLNBO75369 2602 aaKnown RBP8.51□□□□□ -1.05
COPA-201ENST00000241704 KNCNA6PVL3 124 aa8.51□□□□□ -1.05
COPA-201ENST00000241704 K7EIM0 57 aa8.51□□□□□ -1.05
COPA-201ENST00000241704 CFHR3Q02985 330 aa8.51□□□□□ -1.05
COPA-201ENST00000241704 FOXE3Q13461 319 aa8.51□□□□□ -1.05
COPA-201ENST00000241704 COL5A1P20908 1838 aaPredicted RBP8.51□□□□□ -1.05
COPA-201ENST00000241704 FSTL3O95633 263 aa8.5□□□□□ -1.05
COPA-201ENST00000241704 CFAP126Q5VTH2 177 aa8.5□□□□□ -1.05
COPA-201ENST00000241704 PRR25Q96S07 402 aa8.5□□□□□ -1.05
COPA-201ENST00000241704 IGLV11-55A0A075B6I3 123 aa8.5□□□□□ -1.05
COPA-201ENST00000241704 CLPSL1A2RUU4 121 aa8.5□□□□□ -1.05
COPA-201ENST00000241704 IGKV1-17P01599 117 aa8.5□□□□□ -1.05
COPA-201ENST00000241704 Q8N9W7 124 aa8.5□□□□□ -1.05
COPA-201ENST00000241704 PIFOQ8TCI5 191 aa8.49□□□□□ -1.05
COPA-201ENST00000241704 A0A087WWL8 130 aa8.49□□□□□ -1.05
COPA-201ENST00000241704 SIRPDQ9H106 197 aa8.49□□□□□ -1.05
COPA-201ENST00000241704 DNAL4O96015 105 aa8.49□□□□□ -1.05
COPA-201ENST00000241704 DEFB104AQ8WTQ1 72 aa8.49□□□□□ -1.05
COPA-201ENST00000241704 KLK9Q9UKQ9 250 aa8.49□□□□□ -1.05
COPA-201ENST00000241704 NACAE9PAV3 2078 aa8.48□□□□□ -1.05
COPA-201ENST00000241704 TEX22C9J3V5 150 aa8.48□□□□□ -1.05
COPA-201ENST00000241704 CCDC179H3BU77 68 aa8.48□□□□□ -1.05
COPA-201ENST00000241704 RHODO00212 210 aa8.48□□□□□ -1.05
COPA-201ENST00000241704 LY6G5BQ8NDX9 201 aa8.48□□□□□ -1.05
COPA-201ENST00000241704 PHLDA1Q8WV24 401 aaPredicted RBP8.48□□□□□ -1.05
COPA-201ENST00000241704 TRAV12-2A0A075B6T6 113 aa8.48□□□□□ -1.05
COPA-201ENST00000241704 E7EUB6 86 aa8.48□□□□□ -1.05
COPA-201ENST00000241704 SLURP1P55000 103 aa8.48□□□□□ -1.05
COPA-201ENST00000241704 C5orf47Q569G3 176 aa8.48□□□□□ -1.05
COPA-201ENST00000241704 SPANXCQ9NY87 97 aa8.48□□□□□ -1.05
COPA-201ENST00000241704 TRBV6-1A0A0K0K1D8 114 aa8.48□□□□□ -1.05
COPA-201ENST00000241704 CRYGCP07315 174 aa8.48□□□□□ -1.05
COPA-201ENST00000241704 PMVKQ15126 192 aa8.48□□□□□ -1.05
COPA-201ENST00000241704 IGHV1OR15-1A0A075B7D0 117 aa8.47□□□□□ -1.05
COPA-201ENST00000241704 INAFM1C9JVW0 142 aa8.47□□□□□ -1.05
COPA-201ENST00000241704 MYCNOSP40205 109 aa8.47□□□□□ -1.05
COPA-201ENST00000241704 LMO4P61968 165 aa8.47□□□□□ -1.05
COPA-201ENST00000241704 UTF1Q5T230 341 aa8.47□□□□□ -1.05
COPA-201ENST00000241704 EDA2RQ9HAV5 297 aa8.47□□□□□ -1.05
COPA-201ENST00000241704 C17orf77Q96MU5 243 aa8.47□□□□□ -1.05
COPA-201ENST00000241704 VCYO14598 125 aa8.46□□□□□ -1.05
COPA-201ENST00000241704 CTSGP08311 255 aa8.46□□□□□ -1.05
COPA-201ENST00000241704 C5orf56Q8N8D9 126 aa8.46□□□□□ -1.05
COPA-201ENST00000241704 TCL1BO95988 128 aa8.46□□□□□ -1.05
COPA-201ENST00000241704 CDIP1Q9H305 208 aa8.46□□□□□ -1.05
COPA-201ENST00000241704 MTORP42345 2549 aa8.46□□□□□ -1.06
COPA-201ENST00000241704 J3KT08 172 aa8.46□□□□□ -1.06
COPA-201ENST00000241704 PLA2G2AP14555 144 aa8.46□□□□□ -1.06
COPA-201ENST00000241704 ZFP2Q6ZN57 461 aa8.46□□□□□ -1.06
COPA-201ENST00000241704 MAPKAPK5-AS1Q8N8E1 139 aa8.46□□□□□ -1.06
COPA-201ENST00000241704 COL4A2P08572 1712 aa8.46□□□□□ -1.06
COPA-201ENST00000241704 U3KQK5 164 aa8.46□□□□□ -1.06
COPA-201ENST00000241704 A0A0U1RRA0 63 aa8.45□□□□□ -1.06
COPA-201ENST00000241704 GAGE2AQ6NT46 116 aa8.45□□□□□ -1.06
COPA-201ENST00000241704 IGHV3-16A0A0C4DH30 117 aa8.45□□□□□ -1.06
COPA-201ENST00000241704 C2orf66Q6UXQ4 117 aa8.45□□□□□ -1.06
COPA-201ENST00000241704 AJUBAQ96IF1 538 aa8.45□□□□□ -1.06
COPA-201ENST00000241704 CFC1BP0CG36 223 aa8.45□□□□□ -1.06
COPA-201ENST00000241704 CFC1P0CG37 223 aa8.45□□□□□ -1.06
COPA-201ENST00000241704 EGR2P11161 476 aaPredicted RBP8.45□□□□□ -1.06
COPA-201ENST00000241704 SPXQ9BT56 116 aa8.45□□□□□ -1.06
COPA-201ENST00000241704 DNAJC9-AS1A6NH13 148 aa8.44□□□□□ -1.06
COPA-201ENST00000241704 GATA1P15976 413 aaPredicted RBP8.44□□□□□ -1.06
COPA-201ENST00000241704 C1orf229Q6ZS94 237 aaPredicted RBP8.44□□□□□ -1.06
COPA-201ENST00000241704 ODF3BA8MYP8 253 aa8.44□□□□□ -1.06
COPA-201ENST00000241704 TRAV12-1A0A0B4J245 112 aa8.44□□□□□ -1.06
COPA-201ENST00000241704 M0R2P5 195 aa8.44□□□□□ -1.06
COPA-201ENST00000241704 TMEM86BQ8N661 226 aa8.44□□□□□ -1.06
COPA-201ENST00000241704 SMIM2Q9BVW6 85 aa8.44□□□□□ -1.06
COPA-201ENST00000241704 C11orf68Q9H3H3 251 aaKnown RBP8.44□□□□□ -1.06
COPA-201ENST00000241704 MRPL36Q9P0J6 103 aaKnown RBP8.44□□□□□ -1.06
COPA-201ENST00000241704 TRAV13-1A0A0B4J241 112 aa8.44□□□□□ -1.06
COPA-201ENST00000241704 IGKV1D-37A0A075B6S9 117 aa8.43□□□□□ -1.06
COPA-201ENST00000241704 MORN3Q6PF18 240 aaPredicted RBP8.43□□□□□ -1.06
COPA-201ENST00000241704 MRPL53Q96EL3 112 aaKnown RBP8.43□□□□□ -1.06
COPA-201ENST00000241704 C11orf71Q6IPW1 123 aa8.43□□□□□ -1.06
COPA-201ENST00000241704 NDUFA11Q86Y39 141 aa8.43□□□□□ -1.06
COPA-201ENST00000241704 TRAV26-2A0A0B4J265 109 aa8.43□□□□□ -1.06
COPA-201ENST00000241704 TNFRSF13BO14836 293 aaPredicted RBP8.43□□□□□ -1.06
COPA-201ENST00000241704 IGHV4-31P0DP07 118 aa8.43□□□□□ -1.06
COPA-201ENST00000241704 C6orf226Q5I0X4 101 aa8.43□□□□□ -1.06
COPA-201ENST00000241704 CITED2Q99967 270 aaPredicted RBP8.43□□□□□ -1.06
COPA-201ENST00000241704 MSRB1Q9NZV6 116 aa8.43□□□□□ -1.06
COPA-201ENST00000241704 LINC00158P58513 81 aa8.42□□□□□ -1.06
COPA-201ENST00000241704 GATD1Q8NB37 220 aa8.42□□□□□ -1.06
COPA-201ENST00000241704 RBMY1BA6NDE4 496 aaKnown RBP8.42□□□□□ -1.06
COPA-201ENST00000241704 RBMY1EA6NEQ0 496 aaKnown RBP8.42□□□□□ -1.06
COPA-201ENST00000241704 RBMY1DP0C7P1 496 aaKnown RBP8.42□□□□□ -1.06
COPA-201ENST00000241704 RBMY1A1P0DJD3 496 aaKnown RBP8.42□□□□□ -1.06
COPA-201ENST00000241704 RBMY1CP0DJD4 496 aa8.42□□□□□ -1.06
COPA-201ENST00000241704 LINC01620Q4KN68 170 aa8.42□□□□□ -1.06
COPA-201ENST00000241704 AGPAT4-IT1Q9H0P7 198 aa8.42□□□□□ -1.06
COPA-201ENST00000241704 HHLA3Q9XRX5 114 aa8.42□□□□□ -1.06
COPA-201ENST00000241704 A0A096LNJ9 63 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 313.5 ms