RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 MCRIP2Q9BUT9 160 aaKnown RBP17.12■□□□□ 0.33
MSX2-201ENST00000239243 NF1P21359 2839 aa17.12■□□□□ 0.33
MSX2-201ENST00000239243 ATP5LO75964 103 aa17.12■□□□□ 0.33
MSX2-201ENST00000239243 RBMY1A1P0DJD3 496 aaKnown RBP17.12■□□□□ 0.33
MSX2-201ENST00000239243 RBMY1CP0DJD4 496 aa17.12■□□□□ 0.33
MSX2-201ENST00000239243 RBMY1FQ15415 496 aaKnown RBP17.12■□□□□ 0.33
MSX2-201ENST00000239243 ODF3L2Q3SX64 289 aa17.12■□□□□ 0.33
MSX2-201ENST00000239243 RPL39LQ96EH5 51 aaKnown RBP17.12■□□□□ 0.33
MSX2-201ENST00000239243 GOLT1BQ9Y3E0 138 aa17.12■□□□□ 0.33
MSX2-201ENST00000239243 hDV102S1A0JD36 115 aa17.11■□□□□ 0.33
MSX2-201ENST00000239243 OR11H12B2RN74 326 aa17.11■□□□□ 0.33
MSX2-201ENST00000239243 TCAPO15273 167 aa17.11■□□□□ 0.33
MSX2-201ENST00000239243 Q6ZN92 141 aa17.11■□□□□ 0.33
MSX2-201ENST00000239243 PMCHL2Q9BQD1 86 aa17.11■□□□□ 0.33
MSX2-201ENST00000239243 RPL32P62910 135 aaKnown RBP17.1■□□□□ 0.33
MSX2-201ENST00000239243 C18orf15Q96N68 181 aa17.1■□□□□ 0.33
MSX2-201ENST00000239243 LINC00467Q9BRT7 94 aa17.1■□□□□ 0.33
MSX2-201ENST00000239243 JPT2Q9H910 190 aa17.1■□□□□ 0.33
MSX2-201ENST00000239243 A0A087WWL8 130 aa17.09■□□□□ 0.33
MSX2-201ENST00000239243 SAP30O75446 220 aa17.09■□□□□ 0.33
MSX2-201ENST00000239243 INSP01308 110 aa17.09■□□□□ 0.33
MSX2-201ENST00000239243 HNRNPA3P51991 378 aaKnown RBP17.09■□□□□ 0.33
MSX2-201ENST00000239243 C2orf88Q9BSF0 95 aa17.09■□□□□ 0.33
MSX2-201ENST00000239243 ADARB2-AS1A8MUL3 147 aa17.09■□□□□ 0.33
MSX2-201ENST00000239243 F5H697 171 aa17.09■□□□□ 0.33
MSX2-201ENST00000239243 NUDT3O95989 172 aa17.09■□□□□ 0.33
MSX2-201ENST00000239243 ZNF876PQ49A33 203 aa17.09■□□□□ 0.33
MSX2-201ENST00000239243 SUMO4Q6EEV6 95 aa17.09■□□□□ 0.33
MSX2-201ENST00000239243 STHQ8IWL8 128 aa17.09■□□□□ 0.33
MSX2-201ENST00000239243 SNHG12Q9BXW3 62 aa17.08■□□□□ 0.33
MSX2-201ENST00000239243 FOSL1P15407 271 aa17.08■□□□□ 0.32
MSX2-201ENST00000239243 NSUN5P1Q3KNT7 163 aa17.08■□□□□ 0.32
MSX2-201ENST00000239243 NDUFA11Q86Y39 141 aa17.08■□□□□ 0.32
MSX2-201ENST00000239243 ZNF415Q09FC8 603 aa17.06■□□□□ 0.32
MSX2-201ENST00000239243 FAM74A4Q5TZK3 123 aa17.06■□□□□ 0.32
MSX2-201ENST00000239243 CUBNO60494 3623 aa17.06■□□□□ 0.32
MSX2-201ENST00000239243 INAFM1C9JVW0 142 aa17.06■□□□□ 0.32
MSX2-201ENST00000239243 EREGO14944 169 aa17.06■□□□□ 0.32
MSX2-201ENST00000239243 HTN1P15515 57 aa17.06■□□□□ 0.32
MSX2-201ENST00000239243 CRYGDP07320 174 aa17.05■□□□□ 0.32
MSX2-201ENST00000239243 PRSS1P07477 247 aa17.05■□□□□ 0.32
MSX2-201ENST00000239243 PIK3CD-AS1Q5SR53 167 aa17.05■□□□□ 0.32
MSX2-201ENST00000239243 CSTL1Q9H114 145 aa17.05■□□□□ 0.32
MSX2-201ENST00000239243 IGLV1-51P01701 117 aa17.05■□□□□ 0.32
MSX2-201ENST00000239243 G0S2P27469 103 aa17.05■□□□□ 0.32
MSX2-201ENST00000239243 ZNF56Q15929 161 aa17.05■□□□□ 0.32
MSX2-201ENST00000239243 NUTF2P61970 127 aaKnown RBP17.04■□□□□ 0.32
MSX2-201ENST00000239243 LINC01587Q99440 93 aa17.04■□□□□ 0.32
MSX2-201ENST00000239243 FAM110AQ9BQ89 295 aa17.04■□□□□ 0.32
MSX2-201ENST00000239243 MRPS16Q9Y3D3 137 aaKnown RBP17.04■□□□□ 0.32
MSX2-201ENST00000239243 TRBV6-5A0A0K0K1A5 114 aa17.04■□□□□ 0.32
MSX2-201ENST00000239243 TRPT1Q86TN4 253 aaKnown RBP17.04■□□□□ 0.32
MSX2-201ENST00000239243 PTH2Q96A98 100 aa17.04■□□□□ 0.32
MSX2-201ENST00000239243 LINC01549A6NIU2 74 aa17.02■□□□□ 0.32
MSX2-201ENST00000239243 SLC25A34Q6PIV7 304 aa17.02■□□□□ 0.32
MSX2-201ENST00000239243 TOMM6Q96B49 74 aa17.02■□□□□ 0.32
MSX2-201ENST00000239243 WNK1Q9H4A3 2382 aa17.02■□□□□ 0.32
MSX2-201ENST00000239243 M0R2P5 195 aa17.02■□□□□ 0.32
MSX2-201ENST00000239243 VCYO14598 125 aa17.02■□□□□ 0.32
MSX2-201ENST00000239243 POLR2KP53803 58 aaKnown RBP17.02■□□□□ 0.32
MSX2-201ENST00000239243 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.01■□□□□ 0.31
MSX2-201ENST00000239243 ODF1Q14990 250 aa17.01■□□□□ 0.31
MSX2-201ENST00000239243 KIR2DL4Q99706 377 aa17.01■□□□□ 0.31
MSX2-201ENST00000239243 NOTCH2Q04721 2471 aa17.01■□□□□ 0.31
MSX2-201ENST00000239243 M0QY20 66 aa17■□□□□ 0.31
MSX2-201ENST00000239243 SPXQ9BT56 116 aa17■□□□□ 0.31
MSX2-201ENST00000239243 OTOGQ6ZRI0 2925 aa17■□□□□ 0.31
MSX2-201ENST00000239243 A8MWV9 139 aa17■□□□□ 0.31
MSX2-201ENST00000239243 H7C1H1 209 aa16.99■□□□□ 0.31
MSX2-201ENST00000239243 DKK2Q9UBU2 259 aa16.99■□□□□ 0.31
MSX2-201ENST00000239243 SDHAF1A6NFY7 115 aa16.98■□□□□ 0.31
MSX2-201ENST00000239243 PF4P02776 101 aa16.98■□□□□ 0.31
MSX2-201ENST00000239243 TMEM208Q9BTX3 173 aa16.98■□□□□ 0.31
MSX2-201ENST00000239243 ZMAT4Q9H898 229 aa16.98■□□□□ 0.31
MSX2-201ENST00000239243 EDA2RQ9HAV5 297 aa16.98■□□□□ 0.31
MSX2-201ENST00000239243 XCL2Q9UBD3 114 aa16.98■□□□□ 0.31
MSX2-201ENST00000239243 TRBV27A0A0K0K1C4 114 aa16.98■□□□□ 0.31
MSX2-201ENST00000239243 C2orf66Q6UXQ4 117 aa16.98■□□□□ 0.31
MSX2-201ENST00000239243 SCGB3A1Q96QR1 104 aa16.98■□□□□ 0.31
MSX2-201ENST00000239243 KRTAP10-3P60369 221 aa16.97■□□□□ 0.31
MSX2-201ENST00000239243 BEAN1Q3B7T3 259 aa16.97■□□□□ 0.31
MSX2-201ENST00000239243 SETD2Q9BYW2 2564 aaPredicted RBP16.97■□□□□ 0.31
MSX2-201ENST00000239243 COX8AP10176 69 aa16.97■□□□□ 0.31
MSX2-201ENST00000239243 C11orf72Q8NBR9 251 aa16.97■□□□□ 0.31
MSX2-201ENST00000239243 TRAV12-1A0A0B4J245 112 aa16.96■□□□□ 0.3
MSX2-201ENST00000239243 DPM2O94777 84 aa16.96■□□□□ 0.3
MSX2-201ENST00000239243 IGKCP01834 107 aa16.96■□□□□ 0.3
MSX2-201ENST00000239243 CYSLTR1Q9Y271 337 aa16.96■□□□□ 0.3
MSX2-201ENST00000239243 A0A087WX48 190 aa16.94■□□□□ 0.3
MSX2-201ENST00000239243 ERASQ7Z444 233 aa16.94■□□□□ 0.3
MSX2-201ENST00000239243 CRLF1O75462 422 aa16.94■□□□□ 0.3
MSX2-201ENST00000239243 ANKRD39Q53RE8 183 aa16.94■□□□□ 0.3
MSX2-201ENST00000239243 ZFP2Q6ZN57 461 aa16.94■□□□□ 0.3
MSX2-201ENST00000239243 NEGR1Q7Z3B1 354 aa16.94■□□□□ 0.3
MSX2-201ENST00000239243 MORN3Q6PF18 240 aaPredicted RBP16.93■□□□□ 0.3
MSX2-201ENST00000239243 STPG4Q8N801 248 aa16.93■□□□□ 0.3
MSX2-201ENST00000239243 LINC00482Q8N8I6 264 aa16.93■□□□□ 0.3
MSX2-201ENST00000239243 SETXQ7Z333 2677 aaKnown RBP16.93■□□□□ 0.3
MSX2-201ENST00000239243 RHODO00212 210 aa16.93■□□□□ 0.3
MSX2-201ENST00000239243 BATFQ16520 125 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms