RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 AGRNO00468 2067 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 PTPN13Q12923 2485 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 APELAP0DMC3 54 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 HLA-DMBP28068 263 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 CCL17Q92583 94 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 ZNF714Q96N38 554 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 HIST1H4GQ99525 98 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 AAMDCQ9H7C9 122 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 OSTCQ9NRP0 149 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 SPTBN1Q01082 2364 aaKnown RBP6.36□□□□□ -1.39
SPARC-201ENST00000231061 C10orf113Q5VZT2 155 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 ZNF355PQ9NSJ1 428 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 MYO9AB2RTY4 2548 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 IGHV3-72A0A0B4J1Y9 119 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 REG3AQ06141 175 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 FAM120AOSQ5T036 256 aa6.36□□□□□ -1.39
SPARC-201ENST00000231061 ARFGEF3Q5TH69 2177 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 PKDREJQ9NTG1 2253 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 IGHV3-21A0A0B4J1V1 117 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 ZNF22P17026 224 aaPredicted RBP6.35□□□□□ -1.39
SPARC-201ENST00000231061 TMEM158Q8WZ71 300 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 TM2D3Q9BRN9 247 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 BOD1L1Q8NFC6 3051 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 FHL2Q14192 279 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 LAGE3Q14657 143 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 LINC01545Q5VT33 79 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 SPACA3Q8IXA5 215 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 SLC25A2Q9BXI2 301 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 ESM1Q9NQ30 184 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 LINC01549A6NIU2 74 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 E7EUB6 86 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 MFAP2P55001 183 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 HBBP68871 147 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 HCP5Q6MZN7 132 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 PRNTQ86SH4 94 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 PSMG3-AS1Q96PY0 264 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 IMUPQ9GZP8 106 aa6.35□□□□□ -1.39
SPARC-201ENST00000231061 ZFHX4Q86UP3 3567 aa6.34□□□□□ -1.39
SPARC-201ENST00000231061 NDUFB3O43676 98 aa6.34□□□□□ -1.39
SPARC-201ENST00000231061 P0DMU3 169 aa6.34□□□□□ -1.39
SPARC-201ENST00000231061 FAM231AP0DMU4 169 aa6.34□□□□□ -1.39
SPARC-201ENST00000231061 FAM231CP0DMU5 169 aa6.34□□□□□ -1.39
SPARC-201ENST00000231061 TMEM30BQ3MIR4 351 aa6.34□□□□□ -1.39
SPARC-201ENST00000231061 ZNF833PQ6ZTB9 187 aa6.34□□□□□ -1.39
SPARC-201ENST00000231061 FAM168AQ92567 244 aa6.34□□□□□ -1.39
SPARC-201ENST00000231061 NDUFA4L2Q9NRX3 87 aa6.34□□□□□ -1.39
SPARC-201ENST00000231061 PEX7O00628 323 aa6.34□□□□□ -1.39
SPARC-201ENST00000231061 PRYO14603 147 aa6.34□□□□□ -1.39
SPARC-201ENST00000231061 MRPS12O15235 138 aaKnown RBP6.34□□□□□ -1.39
SPARC-201ENST00000231061 ZNF73O43830 326 aaPredicted RBP6.34□□□□□ -1.39
SPARC-201ENST00000231061 PRB3Q04118 309 aaPredicted RBP6.34□□□□□ -1.39
SPARC-201ENST00000231061 DYNLRB1Q9NP97 96 aa6.34□□□□□ -1.39
SPARC-201ENST00000231061 M0R378 163 aa6.34□□□□□ -1.4
SPARC-201ENST00000231061 IGLV2-8P01709 118 aa6.34□□□□□ -1.4
SPARC-201ENST00000231061 WT1-ASQ06250 92 aa6.34□□□□□ -1.4
SPARC-201ENST00000231061 SPANXDQ9BXN6 97 aa6.34□□□□□ -1.4
SPARC-201ENST00000231061 IZUMO1RA6ND01 250 aa6.33□□□□□ -1.4
SPARC-201ENST00000231061 M0R381 172 aa6.33□□□□□ -1.4
SPARC-201ENST00000231061 LYPD2Q6UXB3 125 aa6.33□□□□□ -1.4
SPARC-201ENST00000231061 COX8CQ7Z4L0 72 aa6.33□□□□□ -1.4
SPARC-201ENST00000231061 SERP2Q8N6R1 65 aa6.33□□□□□ -1.4
SPARC-201ENST00000231061 FAM167A-AS1Q96KT0 104 aa6.33□□□□□ -1.4
SPARC-201ENST00000231061 RAI1Q7Z5J4 1906 aaPredicted RBP6.33□□□□□ -1.4
SPARC-201ENST00000231061 BSPH1Q075Z2 132 aa6.33□□□□□ -1.4
SPARC-201ENST00000231061 PVRIGQ6DKI7 326 aa6.33□□□□□ -1.4
SPARC-201ENST00000231061 PDPNQ86YL7 162 aa6.33□□□□□ -1.4
SPARC-201ENST00000231061 SPENQ96T58 3664 aaKnown RBP6.33□□□□□ -1.4
SPARC-201ENST00000231061 A8MUN3 132 aa6.33□□□□□ -1.4
SPARC-201ENST00000231061 ZNF138P52744 262 aa6.33□□□□□ -1.4
SPARC-201ENST00000231061 ZNF329Q86UD4 541 aa6.33□□□□□ -1.4
SPARC-201ENST00000231061 TMEM167AQ8TBQ9 72 aa6.33□□□□□ -1.4
SPARC-201ENST00000231061 MRPL36Q9P0J6 103 aaKnown RBP6.33□□□□□ -1.4
SPARC-201ENST00000231061 SMIM27A0A1W2PRY6 76 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 CXCL5P42830 114 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 SLC50A1Q9BRV3 221 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 NAV3Q8IVL0 2385 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 DMXL1Q9Y485 3027 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 WI2-2373I1.2A0A1W2PRP0 233 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 NDUFS7O75251 213 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 PATE2Q6UY27 113 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 RNASE6Q93091 150 aaKnown RBP6.32□□□□□ -1.4
SPARC-201ENST00000231061 FANCD2OSQ96PS1 177 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 LINC00574Q9H8X3 128 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 PKD1L2Q7Z442 2459 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 TRBV25-1A0A075B6N4 114 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 MYMXA0A1B0GTQ4 84 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 H3BMM0 161 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 UBE2WQ96B02 151 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 LAMTOR3Q9UHA4 124 aa6.32□□□□□ -1.4
SPARC-201ENST00000231061 SBSPONQ8IVN8 264 aa6.31□□□□□ -1.4
SPARC-201ENST00000231061 UPK3BQ9BT76 320 aa6.31□□□□□ -1.4
SPARC-201ENST00000231061 A0A0G2JNJ9 132 aa6.31□□□□□ -1.4
SPARC-201ENST00000231061 CFHR3Q02985 330 aa6.31□□□□□ -1.4
SPARC-201ENST00000231061 RITA1Q96K30 269 aa6.31□□□□□ -1.4
SPARC-201ENST00000231061 Q9UFV3 132 aa6.31□□□□□ -1.4
SPARC-201ENST00000231061 DSCAML1Q8TD84 2053 aa6.31□□□□□ -1.4
SPARC-201ENST00000231061 IGHV1-58A0A0C4DH39 117 aa6.3□□□□□ -1.4
SPARC-201ENST00000231061 HIGD1CA8MV81 97 aa6.3□□□□□ -1.4
SPARC-201ENST00000231061 LINC01619G3V211 115 aa6.3□□□□□ -1.4
SPARC-201ENST00000231061 NPYP01303 97 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms