RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 TRBV7-9A0A0J9YWB2 115 aa10.51□□□□□ -0.73
SCNN1A-201ENST00000228916 SAA4P35542 130 aa10.51□□□□□ -0.73
SCNN1A-201ENST00000228916 RPL39P62891 51 aaKnown RBP10.51□□□□□ -0.73
SCNN1A-201ENST00000228916 ADORA2A-AS1P86434 159 aa10.51□□□□□ -0.73
SCNN1A-201ENST00000228916 RNF183Q96D59 192 aa10.51□□□□□ -0.73
SCNN1A-201ENST00000228916 KIR2DL4Q99706 377 aa10.51□□□□□ -0.73
SCNN1A-201ENST00000228916 ATRXP46100 2492 aa10.5□□□□□ -0.73
SCNN1A-201ENST00000228916 COL12A1Q99715 3063 aa10.5□□□□□ -0.73
SCNN1A-201ENST00000228916 C5orf56Q8N8D9 126 aa10.5□□□□□ -0.73
SCNN1A-201ENST00000228916 C19orf54Q5BKX5 351 aa10.5□□□□□ -0.73
SCNN1A-201ENST00000228916 TMEM170BQ5T4T1 132 aa10.5□□□□□ -0.73
SCNN1A-201ENST00000228916 UNQ9165/PRO28630Q6UXU0 137 aa10.5□□□□□ -0.73
SCNN1A-201ENST00000228916 FAM223BA6NKX1 122 aa10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 J3QQQ9 107 aa10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 VCYO14598 125 aa10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 SCGB1C2P0DMR2 95 aa10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 FAM223AQ8IWN6 122 aa10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 A0A1W2PPR1 153 aa10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 TGFAP01135 160 aa10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 FOXC1Q12948 553 aa10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 SUMO4Q6EEV6 95 aa10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 SPTBN1Q01082 2364 aaKnown RBP10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 SLC25A20O43772 301 aa10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 EIF4EBP3O60516 100 aaPredicted RBP10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 ARL3P36405 182 aa10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 CITED1Q99966 193 aa10.49□□□□□ -0.73
SCNN1A-201ENST00000228916 F6UB75 175 aa10.48□□□□□ -0.73
SCNN1A-201ENST00000228916 IGHV3-33P01772 117 aa10.48□□□□□ -0.73
SCNN1A-201ENST00000228916 TRAV41A0A0B4J266 112 aa10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 TRBV27A0A0K0K1C4 114 aa10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 NDUFA4O00483 81 aa10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 ZFAND6Q6FIF0 208 aa10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 A4D1N5 150 aa10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 LGALS3P17931 250 aaKnown RBP10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 GATA3P23771 443 aa10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 TMEM263Q8WUH6 116 aaKnown RBP10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 JPT2Q9H910 190 aa10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 SDHAF1A6NFY7 115 aa10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 TRBV12-3P01733 135 aa10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 CRIP2P52943 208 aaPredicted RBP10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 DEFB104AQ8WTQ1 72 aa10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 ANAPC13Q9BS18 74 aa10.47□□□□□ -0.73
SCNN1A-201ENST00000228916 A0A0B4J2C4 111 aa10.46□□□□□ -0.73
SCNN1A-201ENST00000228916 TRBV6-5A0A0K0K1A5 114 aa10.46□□□□□ -0.73
SCNN1A-201ENST00000228916 C9JAW5 83 aa10.46□□□□□ -0.73
SCNN1A-201ENST00000228916 P0DMU3 169 aa10.46□□□□□ -0.73
SCNN1A-201ENST00000228916 FAM231AP0DMU4 169 aa10.46□□□□□ -0.73
SCNN1A-201ENST00000228916 FAM231CP0DMU5 169 aa10.46□□□□□ -0.73
SCNN1A-201ENST00000228916 SRD5A1P18405 259 aa10.46□□□□□ -0.74
SCNN1A-201ENST00000228916 TEX29Q8N6K0 151 aa10.46□□□□□ -0.74
SCNN1A-201ENST00000228916 LINC00527Q9UJ94 153 aa10.46□□□□□ -0.74
SCNN1A-201ENST00000228916 IGF2RP11717 2491 aa10.45□□□□□ -0.74
SCNN1A-201ENST00000228916 KLLNB2CW77 178 aa10.45□□□□□ -0.74
SCNN1A-201ENST00000228916 RAX2Q96IS3 184 aa10.45□□□□□ -0.74
SCNN1A-201ENST00000228916 TMEM223A0PJW6 202 aa10.45□□□□□ -0.74
SCNN1A-201ENST00000228916 LGALS9O00182 355 aa10.45□□□□□ -0.74
SCNN1A-201ENST00000228916 LEPROTO15243 131 aa10.45□□□□□ -0.74
SCNN1A-201ENST00000228916 LINC01600Q96MT4 127 aa10.45□□□□□ -0.74
SCNN1A-201ENST00000228916 TRPT1Q86TN4 253 aaKnown RBP10.44□□□□□ -0.74
SCNN1A-201ENST00000228916 TMEM219Q86XT9 240 aa10.44□□□□□ -0.74
SCNN1A-201ENST00000228916 AKAP6Q13023 2319 aa10.44□□□□□ -0.74
SCNN1A-201ENST00000228916 A0A087WWL8 130 aa10.44□□□□□ -0.74
SCNN1A-201ENST00000228916 IGHV1-69P01742 117 aa10.44□□□□□ -0.74
SCNN1A-201ENST00000228916 NPFFO15130 113 aa10.44□□□□□ -0.74
SCNN1A-201ENST00000228916 MOB4Q9Y3A3 225 aa10.43□□□□□ -0.74
SCNN1A-201ENST00000228916 RHODO00212 210 aa10.43□□□□□ -0.74
SCNN1A-201ENST00000228916 NBL1P41271 181 aa10.43□□□□□ -0.74
SCNN1A-201ENST00000228916 FAM159AQ6UWV7 190 aa10.43□□□□□ -0.74
SCNN1A-201ENST00000228916 F5H697 171 aa10.42□□□□□ -0.74
SCNN1A-201ENST00000228916 NHLRC4P0CG21 123 aaPredicted RBP10.42□□□□□ -0.74
SCNN1A-201ENST00000228916 RPL11P62913 178 aaKnown RBP10.42□□□□□ -0.74
SCNN1A-201ENST00000228916 NSUN5P1Q3KNT7 163 aa10.42□□□□□ -0.74
SCNN1A-201ENST00000228916 GAGE5Q13069 117 aa10.42□□□□□ -0.74
SCNN1A-201ENST00000228916 GAGE6Q13070 117 aa10.42□□□□□ -0.74
SCNN1A-201ENST00000228916 MUSTN1Q8IVN3 82 aa10.42□□□□□ -0.74
SCNN1A-201ENST00000228916 COL6A6A6NMZ7 2263 aa10.42□□□□□ -0.74
SCNN1A-201ENST00000228916 A0A0J9YX75 114 aa10.42□□□□□ -0.74
SCNN1A-201ENST00000228916 RHOHQ15669 191 aa10.42□□□□□ -0.74
SCNN1A-201ENST00000228916 TRAV2A0A0B4J234 112 aa10.41□□□□□ -0.74
SCNN1A-201ENST00000228916 ZNF22P17026 224 aaPredicted RBP10.41□□□□□ -0.74
SCNN1A-201ENST00000228916 OPRPNQ99935 248 aaPredicted RBP10.41□□□□□ -0.74
SCNN1A-201ENST00000228916 MAP1AP78559 2803 aaPredicted RBP10.41□□□□□ -0.74
SCNN1A-201ENST00000228916 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.41□□□□□ -0.74
SCNN1A-201ENST00000228916 ELANEP08246 267 aa10.41□□□□□ -0.74
SCNN1A-201ENST00000228916 Q8N1Y9 231 aa10.41□□□□□ -0.74
SCNN1A-201ENST00000228916 CRYBG3Q68DQ2 2970 aa10.41□□□□□ -0.74
SCNN1A-201ENST00000228916 LMO4P61968 165 aa10.4□□□□□ -0.74
SCNN1A-201ENST00000228916 ATXN8Q156A1 80 aa10.4□□□□□ -0.74
SCNN1A-201ENST00000228916 LINC01620Q4KN68 170 aa10.4□□□□□ -0.74
SCNN1A-201ENST00000228916 NTN5Q8WTR8 489 aaPredicted RBP10.4□□□□□ -0.74
SCNN1A-201ENST00000228916 BPESC1Q9GZL8 116 aa10.4□□□□□ -0.74
SCNN1A-201ENST00000228916 ZNF256Q9Y2P7 627 aaPredicted RBP10.4□□□□□ -0.74
SCNN1A-201ENST00000228916 IGKV3-7A0A075B6H7 116 aa10.4□□□□□ -0.74
SCNN1A-201ENST00000228916 M0QY20 66 aa10.4□□□□□ -0.74
SCNN1A-201ENST00000228916 M0R2P5 195 aa10.4□□□□□ -0.74
SCNN1A-201ENST00000228916 RPL13AP40429 203 aaKnown RBP10.4□□□□□ -0.74
SCNN1A-201ENST00000228916 RHPN1-AS1Q9BWJ2 59 aa10.4□□□□□ -0.74
SCNN1A-201ENST00000228916 IGHV3OR16-10A0A075B7F0 116 aa10.4□□□□□ -0.75
SCNN1A-201ENST00000228916 BRI3O95415 125 aa10.4□□□□□ -0.75
SCNN1A-201ENST00000228916 MDFICQ9P1T7 246 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms