RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 VCX2Q9H322 139 aa10.66□□□□□ -0.7
SF1-201ENST00000227503 TRAV2A0A0B4J234 112 aa10.66□□□□□ -0.7
SF1-201ENST00000227503 IFITM1P13164 125 aa10.66□□□□□ -0.7
SF1-201ENST00000227503 Q1RN00 199 aa10.66□□□□□ -0.7
SF1-201ENST00000227503 TMEM262E9PQX1 116 aa10.65□□□□□ -0.7
SF1-201ENST00000227503 LYRM7Q5U5X0 104 aa10.65□□□□□ -0.7
SF1-201ENST00000227503 C15orf53Q8NAA6 179 aa10.65□□□□□ -0.7
SF1-201ENST00000227503 OPRPNQ99935 248 aaPredicted RBP10.65□□□□□ -0.7
SF1-201ENST00000227503 TP53TG1Q9Y2A0 90 aa10.65□□□□□ -0.7
SF1-201ENST00000227503 CLEC3BP05452 202 aa10.64□□□□□ -0.71
SF1-201ENST00000227503 ODF3Q96PU9 254 aa10.64□□□□□ -0.71
SF1-201ENST00000227503 SIRPDQ9H106 197 aa10.64□□□□□ -0.71
SF1-201ENST00000227503 ZNF580Q9UK33 172 aa10.64□□□□□ -0.71
SF1-201ENST00000227503 BUB3O43684 328 aa10.64□□□□□ -0.71
SF1-201ENST00000227503 S100A4P26447 101 aaKnown RBP10.64□□□□□ -0.71
SF1-201ENST00000227503 ECSCRQ19T08 205 aa10.64□□□□□ -0.71
SF1-201ENST00000227503 ZNRF2Q8NHG8 242 aa10.64□□□□□ -0.71
SF1-201ENST00000227503 ZFAND3Q9H8U3 227 aa10.64□□□□□ -0.71
SF1-201ENST00000227503 SLC50A1Q9BRV3 221 aa10.63□□□□□ -0.71
SF1-201ENST00000227503 JPT2Q9H910 190 aa10.63□□□□□ -0.71
SF1-201ENST00000227503 ADARB2-AS1A8MUL3 147 aa10.63□□□□□ -0.71
SF1-201ENST00000227503 KLK9Q2XQG4 91 aa10.63□□□□□ -0.71
SF1-201ENST00000227503 C15orf32Q32M92 178 aa10.63□□□□□ -0.71
SF1-201ENST00000227503 FAM110DQ8TAY7 271 aaPredicted RBP10.63□□□□□ -0.71
SF1-201ENST00000227503 FAM110AQ9BQ89 295 aa10.63□□□□□ -0.71
SF1-201ENST00000227503 KLK9Q9UKQ9 250 aa10.63□□□□□ -0.71
SF1-201ENST00000227503 A0A1W2PPR1 153 aa10.62□□□□□ -0.71
SF1-201ENST00000227503 GNRH2O43555 120 aa10.62□□□□□ -0.71
SF1-201ENST00000227503 CLEC19AQ6UXS0 136 aa10.62□□□□□ -0.71
SF1-201ENST00000227503 SLC25A29Q8N8R3 303 aa10.62□□□□□ -0.71
SF1-201ENST00000227503 CHCHD5Q9BSY4 110 aa10.62□□□□□ -0.71
SF1-201ENST00000227503 SORL1Q92673 2214 aa10.62□□□□□ -0.71
SF1-201ENST00000227503 IGKV3-7A0A075B6H7 116 aa10.62□□□□□ -0.71
SF1-201ENST00000227503 IGHV3-33P01772 117 aa10.62□□□□□ -0.71
SF1-201ENST00000227503 MEIG1Q5JSS6 88 aa10.62□□□□□ -0.71
SF1-201ENST00000227503 Q6ZSV7 163 aa10.62□□□□□ -0.71
SF1-201ENST00000227503 PHLDA3Q9Y5J5 127 aa10.62□□□□□ -0.71
SF1-201ENST00000227503 CLPSL1A2RUU4 121 aa10.61□□□□□ -0.71
SF1-201ENST00000227503 PRRC2AP48634 2157 aaKnown RBP10.61□□□□□ -0.71
SF1-201ENST00000227503 TRAV8-4A0A0B4J246 113 aa10.61□□□□□ -0.71
SF1-201ENST00000227503 ITPR1Q14643 2758 aa10.61□□□□□ -0.71
SF1-201ENST00000227503 ATP6V0E1O15342 81 aa10.6□□□□□ -0.71
SF1-201ENST00000227503 NPC2P61916 151 aa10.6□□□□□ -0.71
SF1-201ENST00000227503 KLRB1Q12918 225 aa10.6□□□□□ -0.71
SF1-201ENST00000227503 MUSTN1Q8IVN3 82 aa10.6□□□□□ -0.71
SF1-201ENST00000227503 C20orf173Q96LM9 149 aa10.6□□□□□ -0.71
SF1-201ENST00000227503 AMELXQ99217 191 aa10.6□□□□□ -0.71
SF1-201ENST00000227503 F6UB75 175 aa10.6□□□□□ -0.71
SF1-201ENST00000227503 J3QQQ9 107 aa10.6□□□□□ -0.71
SF1-201ENST00000227503 HERVK_113P61574 105 aa10.6□□□□□ -0.71
SF1-201ENST00000227503 CCDC140Q96MF4 163 aa10.6□□□□□ -0.71
SF1-201ENST00000227503 CUBNO60494 3623 aa10.6□□□□□ -0.71
SF1-201ENST00000227503 RBAKDNA6NC62 111 aa10.59□□□□□ -0.71
SF1-201ENST00000227503 DPH3P1Q9H4G8 78 aa10.59□□□□□ -0.71
SF1-201ENST00000227503 A0A087WWL8 130 aa10.59□□□□□ -0.71
SF1-201ENST00000227503 UBE2E1P51965 193 aa10.59□□□□□ -0.71
SF1-201ENST00000227503 LINC01620Q4KN68 170 aa10.59□□□□□ -0.71
SF1-201ENST00000227503 TMEM263Q8WUH6 116 aaKnown RBP10.59□□□□□ -0.71
SF1-201ENST00000227503 LGALS3P17931 250 aaKnown RBP10.59□□□□□ -0.71
SF1-201ENST00000227503 DUX3Q96PT4 197 aa10.59□□□□□ -0.71
SF1-201ENST00000227503 LINC00527Q9UJ94 153 aa10.59□□□□□ -0.71
SF1-201ENST00000227503 G3V318 75 aa10.58□□□□□ -0.72
SF1-201ENST00000227503 GPHB5Q86YW7 130 aa10.58□□□□□ -0.72
SF1-201ENST00000227503 C16orf92Q96LL3 132 aa10.58□□□□□ -0.72
SF1-201ENST00000227503 IGHV4-4A0A075B6R2 117 aa10.58□□□□□ -0.72
SF1-201ENST00000227503 PPDPFQ9H3Y8 114 aa10.58□□□□□ -0.72
SF1-201ENST00000227503 RNASE4P34096 147 aaKnown RBP10.57□□□□□ -0.72
SF1-201ENST00000227503 SAA4P35542 130 aa10.57□□□□□ -0.72
SF1-201ENST00000227503 ASIPP42127 132 aa10.57□□□□□ -0.72
SF1-201ENST00000227503 ZNF56Q15929 161 aa10.57□□□□□ -0.72
SF1-201ENST00000227503 IGIPA6NJ69 53 aa10.57□□□□□ -0.72
SF1-201ENST00000227503 TRIAP1O43715 76 aa10.57□□□□□ -0.72
SF1-201ENST00000227503 PMVKQ15126 192 aa10.57□□□□□ -0.72
SF1-201ENST00000227503 ZNF256Q9Y2P7 627 aaPredicted RBP10.57□□□□□ -0.72
SF1-201ENST00000227503 VPS13CQ709C8 3753 aa10.56□□□□□ -0.72
SF1-201ENST00000227503 F5H697 171 aa10.56□□□□□ -0.72
SF1-201ENST00000227503 CLEC2BQ92478 149 aa10.56□□□□□ -0.72
SF1-201ENST00000227503 ID1P41134 155 aa10.55□□□□□ -0.72
SF1-201ENST00000227503 PIEZO1Q92508 2521 aa10.55□□□□□ -0.72
SF1-201ENST00000227503 CENPVL3A0A0U1RRI6 287 aa10.55□□□□□ -0.72
SF1-201ENST00000227503 H3BMM0 161 aa10.55□□□□□ -0.72
SF1-201ENST00000227503 FAM74A4Q5TZK3 123 aa10.55□□□□□ -0.72
SF1-201ENST00000227503 UBE2WQ96B02 151 aa10.55□□□□□ -0.72
SF1-201ENST00000227503 C2orf82Q6UX34 121 aa10.55□□□□□ -0.72
SF1-201ENST00000227503 U3KQE9 123 aa10.55□□□□□ -0.72
SF1-201ENST00000227503 PRSS2P07478 247 aa10.54□□□□□ -0.72
SF1-201ENST00000227503 UCNP55089 124 aa10.54□□□□□ -0.72
SF1-201ENST00000227503 LMO4P61968 165 aa10.54□□□□□ -0.72
SF1-201ENST00000227503 C9orf47Q6ZRZ4 202 aa10.54□□□□□ -0.72
SF1-201ENST00000227503 ZFAND2AQ8N6M9 145 aa10.54□□□□□ -0.72
SF1-201ENST00000227503 EEF1AKMT3Q96AZ1 226 aa10.54□□□□□ -0.72
SF1-201ENST00000227503 ATXN8Q156A1 80 aa10.54□□□□□ -0.72
SF1-201ENST00000227503 TRBV7-1A0A0A6YYK4 115 aa10.53□□□□□ -0.72
SF1-201ENST00000227503 RNASE3P12724 160 aaKnown RBP10.53□□□□□ -0.72
SF1-201ENST00000227503 ZNF22P17026 224 aaPredicted RBP10.53□□□□□ -0.72
SF1-201ENST00000227503 MRPL53Q96EL3 112 aaKnown RBP10.53□□□□□ -0.72
SF1-201ENST00000227503 METTL26Q96S19 204 aa10.53□□□□□ -0.72
SF1-201ENST00000227503 C5orf56Q8N8D9 126 aa10.53□□□□□ -0.72
SF1-201ENST00000227503 NPFFO15130 113 aa10.52□□□□□ -0.72
SF1-201ENST00000227503 RPL11P62913 178 aaKnown RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms